XLOC_003012 (gene) - C. hemisphaerica

Overview
NameXLOC_003012
Unique NameXLOC_003012
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000052:288997..293624+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003012 ID=XLOC_003012|Name=XLOC_003012|organism=Clytia hemisphaerica|type=gene|length=4628bp|location=Sequence derived from alignment at sc0000052:288997..293624+ (Clytia hemisphaerica)
GCAAGACCGCCAGGTCCATACGAACCGTTCGGTTTGTATGTGTGCTCAGA ATAGTAATGTTCAAAGattcaacttttttcttttactttttataacagaa taaaatacaaaaaagatgTATTCCAGAAAGGTTGTATTCTTGCTTTTGTT GGTCAATTTTGTTTACTCCTTTGAAGAGAGTGAAGAAGAAAGTGGTTCAG GCAGTAAGTATTGTTGCATAACTCCTTCAGTACTTTGCGGGGAAACAaga atttattgtttttttttttaagccaAGGTACGTCAACTTCAAAGGCAAAA TAGATGGTGGGGTTCTTTGGAAAGACCTATCTTCTTAGCgtacttatttt ttgaattaggCCATCAATCAAGATTACCGTCAGCCGAAAAAAGGGTAAAT AAATGAAGGAAATTTTGTTGGGTAGTAATAGCTATACTTTTTAATATCGA GTTCTATGCTTTATCATTGAAATATGATTTCTGTGAGTCATCGGCGATTC AACTAAATTTTTGAAGTAATGAGGGGGTCTATGTaacaaatcctgcatta ctaaaaatattATCGACAGTAGCACATCGATAGTAGAACCAtagagtttc aagcccgaagggctagaggcaaGACTTCCCTTTTCAGGCAAGATAAATTG AAACTactcatttcccatccaaaacacgaatagaacgcgccgtaatcatg acgacagattgtatctagcggttcctttgttttggaggactacatttttt gaaatctaacgatagattttagtttcaatctggcgtatattgtgtaaaaa ctacgcgcgggcgttttaagtggtttcattttccctccaggagtctcgcc tctactcttcgggcttgaaactcaatgtttagaacgtcgaattagacaGA GTCACCTGTATTCCAATTTTTTGTAGTTGATCCTGGAgacaaaatattga aagaatTCGAAGCATTATTATCAAATTTGAAAGACACAGATCTATTAGTG ATGGTGGATGTCACTCAACCAGCTGAAAATTTCACTGAAGCATTAAAGAA TATATCGAAAGACGCAGTGCCTTGTATGAAGAAATTCAGTGAAGAAAAGA ATTCTGTTTCCGTTATGACGTTCTCTTCTACTCCGCAATTGATCATCGAC TTTGATTCTCCATGTCTAAAAGATATTGCTTGTATGGAAGACAAAGGAAA AACTATAAAGTAAGAATACTCATGTCAGTATTGTGGGAAACTTAAGATTT TTAAGGAGCTTTTTTCAAAGCTATGATTTGTTgacttcaaataatttttt tggcttTGGCTAAAGTGAAATAGATTATTTTGGTTTCAAGCTCTTTTTTG AATAAGATCCTCAATCCAAATTAAAAGACAACCTTCAGCtcaaaaataaa ggaaattAAACTGGGCAGAGTACTGAATAAGTTAAGTAAACcgtcataca cgtttttttataagataacgcaaaatttttgaagtcttcggatgttctta aatttttgagctttaagtctaaaaatgttcttaacatgttcttattttca ccatttttttagcatttttgtccattttccttaagaaattggatgtttta gagtctgcaagccctaaaatgttcttaacttgttcttaacattttgagca TTGAAGccttatatgttcttatatagtttgttcttataaaaaaatgtgta tcatGTATTTAAAAAACGATCATTTCGATGACTTACCTTCCCGCAATACA TTAATAGGATGAACAATTTCCAGAGGGTTGCTGCTGTTTGTTTACGTGTC GTACTTAAATGTTactaaaattatgcaaaaattatgCAAAAGAGCCTCTT ATGTATGATGCGTGACATTGAGTCAATTTCTTGGCTGAAATGATACTATG GAACAATAAAGTATTTGGTTTACATTTTGGaattaatacaccttttcgac cgtagccgccaattgcagcgtggacatttttttgtccgttttaccacgcC CTAAAATCGTCCTAGTCtctttttcgcacctatagacaatagaaaaatgt gtaaaaaaggattggatcgggTTTAATGTGATAAAACGGACAAAACAATG TCGgcgcggcaattggtggctacggtcaaAAAGATGTATTAAGTAATTAT CAATTTTGGGAGCTTCCAAGACTGAAAACTCAAAGATACTAAAACTTGCT TATCAGTGCCCCCTGCCTCGGTGAATTTGGAGTTCAGACAGTCAaggaca ccttcaaattagcctatcataggctgattagcctatcataggctatttag ccgaaaatcgataaaaacctcaatttctgacgaaatataaatagtcgcgt ctatTTTTCACCATTACTTCATTGTCTAAATATTAAATATATATGTAATA AATATATTGTCTAATattcaattttggaaacagaaatatgaataaattta ctatccatcggctaactaaccgattataggctaattttctgataataAAG TGCCGTGTACAAAAACACATGTTTGTTNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNAAAGCCCGATTTCCTTACCCTGCGCA TGCGCACGCATGCGCAGTaccaaaaagtggaatatttcctaaaccaaaat tgacccaaagtcaaaatttgtcatgaaCATTACTCTGACCATGAGAAACC ATGTATTCCTTAGagaagacgcgactatttatatttcgtcagaaatcaag gctgataggctaatttgaaggtgtcctTGACTGTCAGACGGGAGTTCAGA GCTCAGGATTCACGGAAATTTAATAAAAACCGGGGGGGGGATTCACAACT GAGCAACTgcacgttgtttttttataagaacatccaaaattgttgaagcc ttcggatgtttctacctttttgagttttaagcctaaaaatgttcttattt tgtttattttgtgaatacttttgtccattttcccaagaaatcgGGGTTTT TTGAGTCCAcgaagccttagaatgttcttaacttgttcttaacattttgg ccagtgaatgtttttatatagtttgttcttaagaaaaaaaacgtatatcc tgtaaatttttaattctttttcagGACAAAAAATGAAGCACGTAATTTGA AGAAGGCTTTGAGGAAAGCTAAACAACATTTATCGCAtcgtaaaaagatt tttaaagataaaaaacaattacTGCTACTCATCACGTTCGGAGCTGATGA ACCAGTTTCAAGCAAATCCACAAAAATCACCAAGACTAACGTTTTCTCAC GTATTGGTAAAAAATTCAGCCGAGATGACGTCACAGTTGCCGTCGTCGGA ATTGGGAAGGAGGCGATCAAACAGAAAAGTCATTTAAGTGATATTCTCCA CCCtgaaaagaaaaattcgaaCGAGGAAGATAAATATTTAATGTTTTCTG AAGAAGACTATATAACGGAGATTCTAATGTTCTCAGTTAATTTCAGTAAG TATGCATACTTCTTTCGaccattaaaggttttgtttttagataagagtca tatcgtttgcttacttgtcaattttaattcgaaagctttttcacattgga ttgattGGATTCattgagcaagattggtcagaaaaaggaaaattttgctt atatcagcacaatataacaataggtaaaCACTATCCTGATATGAagtatg tgtctgatatgaaacggaaacacttatgtaaaaagaaaacctttaaaccC TTTCCGTGTCAAAATTGAATTTATGCTGTTCCACTTTCTTTCAACTTTGT CAAGCGtttttcttaaaggttttatacaaaaaaaaacaacatttaaaCCA ATGGTTTTAAAAATCAACAAGTTGTAAATCTTcgtttttatcttttgaaa aagatttttaccaATTTCAAGCTAAATTTCAATGcttgattttactttcg ttttgaaaaACCAAAATGAAAAGTAGGGTTAAAACTATTATCGCGTCTCT ACTTATGTAGTAAACCTTCATAACTCGATTTTCCATAGCATATCTAAACC CCCTGTGCTTTCGCTCATTGGAAAGTTTACCATAATTTCGTCCCTGGTGA GGAAAATACCCCACATTTCAttcccactgagaaattgacttagATTTCAT ATAAGTTCAAAATTCGATGTAAAGAATTGGGGAGCTACTGTATTTTTTGA GctcggaacaatagaatttctatccacaTTAAGAATATCCCCGCTGTGGA GAATGGTACCaatggggctgtgagacaggggtgtatctcTGGAATGTACC GCTCAATTGAGAGAATCTTTAAGTTATGTTAtgtccaccattatggaagc aaacattcgatttgcgtaagaattgcctctacagattcgaaaatttgctt ccataatggcgaaaATTACGTTACagaacaaaatatgaaaatctctatat ctaaattttgatttatctCTTATAGCTTGCGTTGATAAGTTCAATGATAT TTTTGGTATGGATTTCTGAAGATGTCGATTTGGAGAAGAATTGCTCATTT TGTAactaattattttattatttcatattttaaagCGGCAAAAATAGTAT AAAATAGACGAAAGAAATTTCATAGTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005286TCONS_00005286Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005286-proteinTCONS_00005286-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:288997..293624 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.8 1.08 0.35 0.59 3.17 2.78 0.8 0.85 0.78 0.92 1.35 0.15 7.36 5.23 0.86 0.59 14.76 16.56 16.01 18.28 19.48 17.42 41.9 43.91 41.56 45.2 98.33 49.78 375.93 419.23