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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000133_pilon:526436..532032- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15254.1.p2 ID=MSTRG.15254.1.p2|Name=MSTRG.15254.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5597bp|location=Sequence derived from alignment at sc0000133_pilon:526436..532032- (Clytia hemisphaerica_ch_hm2_pilon)
TCTCTAATCAATTGGTTACAAATTTCCTATAAAAGAATAGGAAGCATTTT
AAAAAGTTATAAGAGTGTTTTGTTTTCGAGAATTATGGAACAATCAGAAT
TGGAGGATGATAAGATTGAGCCAAGAGAAAAGGAAAAGAATTATTTGATT
TACCATGTTGAAAGCTACGATGACACCAATAACATATTGCATGACCATGA
ACAGACACATGGCTTTAAATATGCTTGCTGGTATCAGTCAAAGAATTTCG
GAAATTCAGGTAATCATTTTTAACTTACTTTACTTTTTGATTTTTAAAAT
TTTTTAGCTTTGACATATTAGCTTAGGACTACTACTACTGTCCGGATGCA
CATTGTATATAAGTTAAGGTCCATTGTGGAAAAGTCATTTGATTCCCTCA
ATGTATGATACAGTTGATTGCTTCAGCACTGGAATCTCTCACATAGCAGC
TCCCTCAAGTCTAAAATCAAAGTGAGAAGACAATTGTACACCTTCCAAAC
TGGCCTTTCCTTGTAAGTTCCAGAACAGTTGCAAAATCCGAAGCAAAATC
CTTTTTTCACAGGCTTTGAAGAACGATATTTTTTTCTCCAGATTGGCTCA
TTAGTTTTTTCTGATTTTTTGCACAAAGAGGGATAAACTATAAACCCTCG
AATGTGAAGGAGCCTGATTTTCGAAAATAAAAATTTTTGGGCAAATTTGG
GGCAATAAACGGCTAAAAAACAGGTTTTTTGGACTTCGTGAAAAATTGAA
ACATTAATTTTTTCTGATTTTTTGCATGAAAGTAGGGTACCATCATAGGT
GGCTCAAGCAGATTTTTGCAAAAAAAATTTTTTGGCTCAAAAAAACCCAT
GTTTGTCTTCAAGATTCACTATTAATAAGCATACATCAATGTTCTTAGTC
AAATTACTCAATTTTTTTATGAGATAGATGTTTTTTTTGCTCACGAGGGC
TTACTTTTAAATAATAATTAATATGTGTTTTTACACATGAAATTTTGGTT
GCTTGGCGTGTTTTTATAGAAAAACTGGCCAAATTCGATATTTTTTTATA
AGCACATTATCAATTACTTAGGTATTAGCTTTTTCTTGAGAATGGCTTTT
TCATTCTTTATGATTTTTTACACAAAGATGCATAACTATAAACCGTCGAA
TGTGACGGAGGTCGATTTTTGGAAACAAAATTTTTGGTTAAATTTCAGCA
AAAACAGCTAAAAAGGGTTTTTTGGACTTTGTGAAATATTGGATCATTGT
TTTTTTCCTGATTTTTTGCATGAAAGTAGGTAAAAGATGGCTCAAGCACA
TTTTTGTAAAAAAAGAATTTATCAGCTCAAAAAACGCATCTTTATCTATA
AGAATCACTATTAATAAGCATACATCAATGTTCTTAGCCAAATTACTCAT
TTTTTTGATGAGATATGTTTTTTTGCTAACGAAGTCTTGAATATGAAAGA
ATATTTCAAGAGCATGAAAGTTTGGTTTCTAAACGTTTTTTTTTTTAAGA
AACAAACGACTAATTTTAATAGATTGTCACTATTTGTGTTCTGAATGATG
GTTTAATGGTCATGCTCACATATATATCAATTATATAATGTGTTAAATGC
ATAACCAGGTAGGTCCATAAAAGTATCACTTGTTTCTATAGATTTTTATG
AGAAGACCCACAAAATCATGTGGAATGACGAAACAATCACTTTCAGTGGA
GTTCCTTTTATTATTCTGGGAACTAAAAAATTGGATTGTCACTTTGGAAA
AGATCGAAATATTGTACCAAAGAAGAGAAGGTTGGCTCAGGTAATTATTT
CAAAGTAAATTGAAAGTTTCATAATTTTCTTAAGATGACAAGTAGGTTTT
AGTGTCTAGCAGTAGCGTGAACCTAGAGAGTAAACTTTATAAATTCACTA
ACTTCATTGCCCATTTCCTTCACTAAAAAAGTAGTTTTTTTCACCCTCCC
TGCCTGTGTAGGCAGATATTTTAACACTTTGAGATGAGGGGTGTCAATTT
TTTTATTTTTGCATCTTCAAGCTGGTCAATCCAACAGAGTATTGTCCTCT
AGCAGTTTTCTTTTATTCATTATATTGAGATATATGATTCTATAATTTTT
AGAAAGCTGAAGCTGATAAACCATATAAAAATCCAAGAAGTATTCGCATG
ACTGTCAAAAATAACTGTCCCTGTCAGGTTGTGGTTAAAGAACTGGTTCA
TTTCCCTGACCATACAGTAAGATTTCTTTATCAAATAATCTAGTTCATTT
TCCTGGTTTGAAGCAATAATGATTTCTTCTATGTATCTTTCTGTTAAGCC
AAGATCAATATCAATTTTTTTCGCAATAAGAATTACCATTTACTCTGTTT
ATTTTCTGTTCTTTTTTAAGATAACAGGTGACACTAAATGGAAAAGAGAG
ACTGGGTCAAAGCTATTAAGGAAAGCAATCAAAAATCGTACCTTGGCAAA
TTTCAAGAAAAGTTTCATTCTAATGATTCCACCTGCAGAAGAGCATGTCA
ACCATCCTAATATGGTAATTGAAAAAAACACAAATAGAAAATATCACTAA
TTATTTCTGAACTTTTGATTTGAGTGTATCTAGCATTTTTGTTGTGTTTG
AATTTATTAGTAATAAGTTTCATACTTAGAAGGTACAGTAGAGCATTTTT
TTAATGTCAATTTTTGTCATTTAGAATAATTTTGTCAATTGATATTGTTA
TTTCGTGGAGTGTGATCACTCTTTTAGTTTCAAAGATACTGTGATAATAC
TCTATTTTATTTCCTTCTCTCAGGAGGTCATCCAAGTCATCCGTAATCCT
GAACGACCTAGTCCTCCTGCAACTCAAATTACACATAAAGTGCGGAAACC
ACCTCCTAAACCTCCAATATGCTGGGGAGAAAAGACACGTGACTTATTAG
ATGAAGTCAAAACTTTAACTTACTTGATGGAAAACGAGGAAAGTGTTATG
AAAGATTTACATTCAAATTTGGAAGAGATCAAGAAATACATGATACTTGC
TATACAAGAGAAAGATCAAGTGCGTAACAGTGTTTTGAGTGTTGGTTCAG
ATACTCAACAAGAAGAACATCATCATCACCATCAACATATAGTAGTTGCT
AAGACTGACCATGAGGAGGACGGACAACATTCTAAACCTACACATAATGA
TGGACAGAATATTAAGACGATAAAACAGGACTTAGTTGTTGAAAGACAGC
CAGGCAGTGAAAATGAAGTACAACTTTTTATAGAGCATCCAAGTTTAACG
AAAAATGAAATGTTAGTTCCACATCATCATACTGAAAATGAGGAGGAGGA
GCCTGGAACGAGCTCCACGACTATTGAAGAAGAAGACCCTCCTAATATAG
ACGAAGATGTTATAAGACAACATAATTTGAATCCACAAGAATTCCAAGTG
TTAACGAACATGATACATGTTTTATTGGAAGAAAAGAATAGCTCAGTAGA
TCCTCCAACTACTTAATGGTGATAGGATAAGCTTTGATTTCTTTGTCTGG
TTCATTCACTTCGTATTAGTACTTTCAGCTTATCTGATAGATTTACGGTT
ATTTATCTGTTCTAAAATAATATGAGGGAACTGTTTTTTGAACTTTTGTC
GCTAATGTTTGAGTAGCCAATATAGCTACTTATTAATTCTAGTGCTCTTA
AAAAAACATCAGCCTCAAAATCATGATAGGATTAATTTCCGAAAATGCAC
ATCCTGTGATTTTTTGAAGGTGATTTCTTAACTTTGTCCTTTTTTCCCGT
CACCTCGCATAGCTAGCTTCCTCTAGGGGCTAGTAACCTTTAGCAAAAGC
TGTCTATTTTTGTGTTGTTACTTTAACTCACTTGTTAATCTTTTCTTTAT
TTTCAGTCAAAAAAAGAAAAAAAAAGAACGAACATGAAAAAGAATGATTC
GAATAAAACATAGAAGATGCTATCTGGTTTTAGTTTTATTGTTAATATTG
TTAGCATGGGTTCATTTCAAATTACTCCCATCAATTACTGACCAGTATAA
TACAGACTGCTATCTCAGTGAACAATCGAAAAAAGATCTTGAAATTTTAC
TGAAAATCATTATATCATCATTTGAGAAAAATAAGGTTTTCTATTGGTTA
GATTATGGCTCGTTGCTAGGTGCAGTTCGTTACCATGGTATTATCCCTTG
GGATGGAGACGGGGATGTCTCTTTCCTTAAGGATGATCCTAATGTAAGTG
AGGCTTTACGTGATATAAATAACCGAGGAGTATCTGCTAACACCATGATA
GCAACTTATGGATCCGCATCTGTTGACCTCGTGCGTTGGACTGAGCATGA
AAATACTTACACCAAATATTACCCAAGCTGGGTCAAAGATGGTCTAATAA
CCAAGATTAGTCATAAGTTAGAATATATCCCTAAAGAGTTTATTGGAAAA
CGAACTATCTTGGAATTTGTTGGTATTCAAGTTGCCGTGCCCGAGAAATA
TATTGGCTTGTTGAAACGCAGGTATCGTTTGTCGTATTGGTTTTCGGTAC
CGTTTAAATGGAAATGTTATGTACCATGTTTTATGAAAACTGACCAATCG
TGTGATGATTGATGGTGGATGGATTGAACGTTTTGTTAAAATGATGGGCT
GTCAAGCGATTATTTTTTTGTTTTTAGTGACCTTTGGTATGGGATTATTG
TTTTAAGATAACTACACGTTTTTTTTTTAAGAAACACACTTTTAAGAAAC
ATGAGGCTCAGAATGCTTAAAAACTAAGAAACATCTAAGAATATAATGCT
GAGGCTGAGAATGAGAAAATAACATTTTTTTAATTCGTTTTTTTTTAAAG
GACTTTCCAATCAAAACAAATATTTATTTATAAAAATGTTTATTTTTAAT
TGCATGAAAATTAGGCTGATTATGTCAAAAAGGCCGATTTCTTAAGAAAC
ATTGAGGCTGGCTTGGTAAAACTAGTTTCTTAAAAACAAACGTGTATTTC
CTCTACTTTTTAATGTTCAATACACTGCACAAGTTAGAAAGTATAAAATA
AATACCTACCCAGGTTTGTCTTTCCCAATGATATTACCCTAATTTGTTTA
TTGATTCGTTCGTTAATTTTAAAAGTTTTTTCACTTTTGCTAATCCCGGT
GGGGGTACCTAGGCAATTGAAGAGTACATGTATCTGGCGCCTTTAAGGGT
GCCTTTTTCAAACCTTGAAGTCTTTTTGAGGGTTGGAAATAATCAGAAAT
AAATAGAATAGGGAACTTTTAACTTTTTGCCCCTTATTAGATCAAAATGG
TCAAATTATTCTTAATTAGGGTCGTAAAATCCATAAAAAATTTTCCTTCT
TTTTAGTTCCTCTAAGGGTCCGAGGGTCGAAATCCTGCGGCACATACCCG
CCAGCTATCCTCCTCCTCCGGAATAATATTTTGTGCAATTCTATTTGACT
CATGAAAATGCATTTTTAATAACACGTTTTTTTTTAACTACTTTTATTTT
TAAAAATATTAATTGCTTTTTTTTACTTACAGGTATTATTTTCAATACTT
TTTATTTTTCATATTTATTTTGCATAAATCACTTAATATAATCTTTGAAT
TATGTGAAGGAATAAATAAGTTAACAGAACTAAATTTTTGGGCCAAT Coding sequence (CDS) from alignment at sc0000133_pilon:526436..532032- >MSTRG.15254.1.p2 ID=MSTRG.15254.1.p2|Name=MSTRG.15254.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=669bp|location=Sequence derived from alignment at sc0000133_pilon:526436..532032- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTCGAATAAAACATAGAAGATGCTATCTGGTTTTAGTTTTATTGTT
AATATTGTTAGCATGGGTTCATTTCAAATTACTCCCATCAATTACTGACC
AGTATAATACAGACTGCTATCTCAGTGAACAATCGAAAAAAGATCTTGAA
ATTTTACTGAAAATCATTATATCATCATTTGAGAAAAATAAGGTTTTCTA
TTGGTTAGATTATGGCTCGTTGCTAGGTGCAGTTCGTTACCATGGTATTA
TCCCTTGGGATGGAGACGGGGATGTCTCTTTCCTTAAGGATGATCCTAAT
GTAAGTGAGGCTTTACGTGATATAAATAACCGAGGAGTATCTGCTAACAC
CATGATAGCAACTTATGGATCCGCATCTGTTGACCTCGTGCGTTGGACTG
AGCATGAAAATACTTACACCAAATATTACCCAAGCTGGGTCAAAGATGGT
CTAATAACCAAGATTAGTCATAAGTTAGAATATATCCCTAAAGAGTTTAT
TGGAAAACGAACTATCTTGGAATTTGTTGGTATTCAAGTTGCCGTGCCCG
AGAAATATATTGGCTTGTTGAAACGCAGGTATCGTTTGTCGTATTGGTTT
TCGGTACCGTTTAAATGGAAATGTTATGTACCATGTTTTATGAAAACTGA
CCAATCGTGTGATGATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133_pilon | genome | sc0000133_pilon:526436..532032 - |
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