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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000130_pilon:690784..693406+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15070.1.p1 ID=MSTRG.15070.1.p1|Name=MSTRG.15070.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2623bp|location=Sequence derived from alignment at sc0000130_pilon:690784..693406+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAGAGTTTCATCTTCAATTACTCCTACCTACTGAACTGGATAAAGCATG
ACTACTTTCTAATAGTAAAATTTGACGGATTTTTCCTTATACGTATTTTA
TTTATAGAGAatgaagtaaaaacaaaaattaaaagtaCTTGCAAGGTGTT
GTGATAACCTGCATAATGTTAACGTCAACGTCTCTGCACGCGACCACGTC
AAACGTTGCGTACTTAGTGAACGAATTCCAATATACAAGAAGCACTCTAT
CTATAAACCATTATGGTGATACAGAGCTCCAAAACATGGCGCCTAAGCCT
CAGGATGAAATGTCTGAATCAGACGGTTACGATCTAGACGAACTAAAAGC
AGCAGATCAACAAAAACCGTTTCGGGAACGTGGTAAACGGATTCGGATTA
ACGTCTCCGGTCGGATTTTCGAAAGTTACCAAAGAACATTAGTCTCTAAA
GAAGGTTCGATTTTCGGATATAGCAGTATTATGAAATATTATGATGAGGA
AAATAAAGAATTCTTTTTCGACAAAGATCCCCACACATTCGAAGCGATCT
TAGTTTATTTACAATGTGGACTCTTACAGCAACCGGAAAAAGTAGATTTC
AAAGCGTTCATTGAAGATCTACAGTTTTTCGGGTTCGGAGACAAAGCGTA
TCATATTTACCGGCGTGAAGCTATCATACCGGATACATCATGCGCAAATC
AAGGAACACGTGAAGAAATCGGATTTCGCCTTTTTCTTTATAACATGCTG
GAGTATCCAGATATCAACTTGACCGCACAAATTTTTGCCGGGTTAACCAG
TTTTATTATCTTCATCTCAATTATAGTATACTGTATCGAAAGTTTACCGT
CAATGCATCCAAACGCTGTTGATAATCTTTCCTATGTCGAAGCATTCTGT
GTAGTTTGGTTTACAATAGAACTTTCAGCCAGATTTATACTTTGCCCTGA
AAAACTCAAATTCGTGAAAAGTCTAATGAACTGGGTTGATTTAGTATCCA
TTGTACCGTTCTATATAACTATACTGATGCCTGAGAATAAGGATTCGAAC
GTTGTAGGGTTGGCCATGTTGCGTGTGTTACGTGTTGCACGGGTGTTTCG
TGTCTTTAAACTGTCACGCTACTCCAAAGCAATTTATCTTATCATTTTAA
CGATAAGCACCAGTGTACGTGAACTAATGCTGCTTCTAATGTTTATCATC
ATTTTAATGGTTTTATTCGCAGCAGCTATTTATCAATTTGAACATGATGA
TCtggatgagaaaaataaatttaaaagcaTACCTCACACTTTTTGGATTG
TTATTGTTACCATAACAACGGTCGGGTATGGAGATATGGTACCGTACACA
CCAGGTAAGACAAACCTAATGATGATCTTCGACTAGGTTAtgaaccatag
atttataaagcccgaagggctagatagcgtacttttgctgaaaagtgtgc
cgaggttaggtaagaaatcctacctaagtcacgtgacgtTACAATAGagt
ttcagcgcttgaccaatttgaagcttcgcgggttttcgaaaacaaatagc
aacaatattttttccgatattcacttttttttgcctgcgatggcttaaag
cacatctagcccttcgagctttataaatctatagtATGAACGTACTTCCA
CTATCAAACAAATAGAATCTTTAAGAATAGAAACAGGttttaaaaacatt
aataaagaaaataatcaaaacgtTTCACCAAAATAACAAAGCAACATTCA
GAACACATTACATtgatatacagtgtgtcccaaaaaaagcggacaaattt
ttatgtaaagtaaaatcctcgtaatttatgccaaattttatgactcgTAT
ACTCAatatttcaatgtcaaaaaccttttcaatcatcttgggaattgaat
atctattgattgaacagaataatcttatttcaattattctaagcCAAGTT
TAGATATGAGTTTTAATGATTTTACTATTTAAAATTGTCCGCtttttttG
GAACACACTGTAAATATAGCTGTTTGAGAAGCTACTCATAACATtacaat
ttgtttatttttcagagGGTCAATTTATcacctcaattttggcaatcaCT
GGAGTGGTCATCGTAGCACTTCCTATACCCATCATCGTCAATAATTTCAC
ACGATTCTATGAACGTATCATGTCCAAATCATCCAAATATCAATTCGAGT
TTGATGAAAGTAAATCCGAGGAGAATAAAGAAACACACTTGGTAGTGACT
CAATGTGAAAGTACTATCTAAAATACACCATTGAGACACGATTCAGACAc
gtttaaattttaaatcaagttctAGTTGCGTTAGGAGAacagtcaaaaaa
gtttcaaaaatgaaaaaagggaaataatgtttctatttttgtttttaggg
TTTCATTGACTTTTCATTGATTCTTGTATCAACCCCGTCAATTTAAAGTT
TTGCtcatatttttgaaactttgcttCGACTTGTTTCGACCACTTTCTAT
TTGAGATTTCATCTACGGTCCAAAATATTCTCTACCATCCTCACTCTTTA
TGTACATAAAATTGTTTATTCGTAATCGAACTTATATTAGGAGTATATTA
CGAAAGATTGTATATAATTATGC Coding sequence (CDS) from alignment at sc0000130_pilon:690784..693406+ >MSTRG.15070.1.p1 ID=MSTRG.15070.1.p1|Name=MSTRG.15070.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2790bp|location=Sequence derived from alignment at sc0000130_pilon:690784..693406+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAACGTCAACGTCTCTGCACGCGACCACGTCAAACGTTGCGTACTT
AGTGAACGAATTCCAATATACAAGAAGCACTCTATCTATAAACCATTATG
GTGATACAGAGCTCCAAAACATGGCGCCTAAGCCTCAGGATGAAATGTCT
GAATCAGACGGTTACGATCTAGACGAACTAAAAGCAGCAGATCAACAAAA
ACCGTTTCGGGAACGTGGTAAACGGATTCGGATTAACGTCTCCGGTCGGA
TTTTCGAAAGTTACCAAAGAACATTAGTCTCTAAAGAAGGTTCGATTTTC
GGATATAGCAGTATTATGAAATATTATGATGAGGAAAATAAAGAATTCTT
TTTCGACAAAGATCCCCACACATTCGAAGCGATCTTAGTTTATTTACAAT
GTGGACTCTTACAGCAACCGGAAAAAGTAGATTTCAAAGCGTTCATTGAA
GATCTACAGTTTTTCGGGTTCGGAGACAAAGCGTATCATATTTACCGGCG
TGAAGCTATCATACCGGATACATCATGCGCAAATCAAGGAACACGTGAAG
AAATCGGATTTCGCCTTTTTCTTTATAACATGCTGGAGTATCCAGATATC
AACTTGACCGCACAAATTTTTGCCGGGTTAACCAGTTTTATTATCTTCAT
CTCAATTATAGTATACTGTATCGAAAGTTTACCGTCAATGCATCCAAACG
CTGTTGATAATCTTTCCTATGTCGAAGCATTCTGTGTAGTTTGGTTTACA
ATAGAACTTTCAGCCAGATTTATACTTTGCCCTGAAAAACTCAAATTCGT
GAAAAGTCTAATGAACTGGGTTGATTTAGTATCCATTGTACCGTTCTATA
TAACTATACTGATGCCTGAGAATAAGGATTCGAACGTTGTAGGGTTGGCC
ATGTTGCGTGTGTTACGTGTTGCACGGGTGTTTCGTGTCTTTAAACTGTC
ACGCTACTCCAAAGCAATTTATCTTATCATTTTAACGATAAGCACCAGTG
TACGTGAACTAATGCTGCTTCTAATGTTTATCATCATTTTAATGGTTTTA
TTCGCAGCAGCTATTTATCAATTTGAACATGATGATCtggatgagaaaaa
taaatttaaaagcaTACCTCACACTTTTTGGATTGTTATTGTTACCATAA
CAACGGTCGGGTATGGAGATATGGTACCGTACACACCAGagGGTCAATTT
ATcacctcaattttggcaatcaCTGGAGTGGTCATCGTAGCACTTCCTAT
ACCCATCATCGTCAATAATTTCACACGATTCTATGAACGTATCATGTCCA
AATCATCCAAATATCAATTCGAGTTTGATGAAAGTAAATCCGAGGAGAAT
AAAGAAACACACTTGGTAGTGACTCAATGTGAAAGTACTATCTAAATGTT
AACGTCAACGTCTCTGCACGCGACCACGTCAAACGTTGCGTACTTAGTGA
ACGAATTCCAATATACAAGAAGCACTCTATCTATAAACCATTATGGTGAT
ACAGAGCTCCAAAACATGGCGCCTAAGCCTCAGGATGAAATGTCTGAATC
AGACGGTTACGATCTAGACGAACTAAAAGCAGCAGATCAACAAAAACCGT
TTCGGGAACGTGGTAAACGGATTCGGATTAACGTCTCCGGTCGGATTTTC
GAAAGTTACCAAAGAACATTAGTCTCTAAAGAAGGTTCGATTTTCGGATA
TAGCAGTATTATGAAATATTATGATGAGGAAAATAAAGAATTCTTTTTCG
ACAAAGATCCCCACACATTCGAAGCGATCTTAGTTTATTTACAATGTGGA
CTCTTACAGCAACCGGAAAAAGTAGATTTCAAAGCGTTCATTGAAGATCT
ACAGTTTTTCGGGTTCGGAGACAAAGCGTATCATATTTACCGGCGTGAAG
CTATCATACCGGATACATCATGCGCAAATCAAGGAACACGTGAAGAAATC
GGATTTCGCCTTTTTCTTTATAACATGCTGGAGTATCCAGATATCAACTT
GACCGCACAAATTTTTGCCGGGTTAACCAGTTTTATTATCTTCATCTCAA
TTATAGTATACTGTATCGAAAGTTTACCGTCAATGCATCCAAACGCTGTT
GATAATCTTTCCTATGTCGAAGCATTCTGTGTAGTTTGGTTTACAATAGA
ACTTTCAGCCAGATTTATACTTTGCCCTGAAAAACTCAAATTCGTGAAAA
GTCTAATGAACTGGGTTGATTTAGTATCCATTGTACCGTTCTATATAACT
ATACTGATGCCTGAGAATAAGGATTCGAACGTTGTAGGGTTGGCCATGTT
GCGTGTGTTACGTGTTGCACGGGTGTTTCGTGTCTTTAAACTGTCACGCT
ACTCCAAAGCAATTTATCTTATCATTTTAACGATAAGCACCAGTGTACGT
GAACTAATGCTGCTTCTAATGTTTATCATCATTTTAATGGTTTTATTCGC
AGCAGCTATTTATCAATTTGAACATGATGATCtggatgagaaaaataaat
ttaaaagcaTACCTCACACTTTTTGGATTGTTATTGTTACCATAACAACG
GTCGGGTATGGAGATATGGTACCGTACACACCAGagGGTCAATTTATcac
ctcaattttggcaatcaCTGGAGTGGTCATCGTAGCACTTCCTATACCCA
TCATCGTCAATAATTTCACACGATTCTATGAACGTATCATGTCCAAATCA
TCCAAATATCAATTCGAGTTTGATGAAAGTAAATCCGAGGAGAATAAAGA
AACACACTTGGTAGTGACTCAATGTGAAAGTACTATCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000130_pilon | genome | sc0000130_pilon:690784..693406 + |
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