MSTRG.15755.1.p2 (mRNA) -

Overview
NameMSTRG.15755.1.p2
Unique NameMSTRG.15755.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000142_pilon:505803..508592-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15755.1.p2 ID=MSTRG.15755.1.p2|Name=MSTRG.15755.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2790bp|location=Sequence derived from alignment at sc0000142_pilon:505803..508592- (Clytia hemisphaerica_ch_hm2_pilon)
AACGGTATATCAGCAAGTCAATGTGTGATCAATTGTGCTGCCAGCATAAA
ATGCAGATCTGTAAATTATCATGGAGGAAGTCAGACGTGTGAACTTCTTG
AGCAGTCTTCTTCAAATGACGGTGAACATCTCATAGTGGAAGCAAAAGGA
TGGATTCATTTCGAGAAATCAAAGGTAATGCAAGAATACGTCACAAAAAA
TTACCAGTAAGGTCATTTTAAATGATCGAGGGCTACATACACTACACAAT
ATATTGTCAGGCAATATATTGATAGTATATTGTTGAATGCCGGCAATATA
TTGAAAAGGTGTCTGCAATATATTGTCAGCTCGATTTGCAATATTCCGAC
AATATAGGGGGACTGTTTGCAGAAAGAAAATTCCTCTTTATAATAGATCA
CCTGTTGTTTACTCCGTACATTACGATTCGAAAACTATATTGTCGAATAT
TGCTCACCAATATATTGTGTAGTCTAAGTAAAGTAGCCCTTTGCTACAAC
ATTTATTACATACTATATTATCATGAACTATGATTACGATCAAATCCTTT
CTCGTAAAATTTTTACAAATCCTTTTGGCCCAGAATTTGGGCATATTTCT
TTTGACCCTTTTTCGTAAATTTCTTTCTTGGGCCATCCCATACCTCCGGT
TGATATTTCACTTGCCAGAATCTGGAGCAAAACATTTTCAATTTGAAAAC
TACCAAAGCATTGTTTCTTTACACCAGCCCGATCAATCCATCATTCCAGA
AGGCGATTATATCAACAAAACAGAAGGTTAGTAAACAATGGTCGACTTTT
TTTGAAATTTTGACAACAAGAAATACCAAACATTATGCAAAAATGACTAA
AGTTGATTCTCCATAACTCGAACCCACACCGGGAACAAACATTTGTTCGA
GTTAAGGAGACATTCAAGTTATAAAGGTTCGAGTTAAAGAAACTCTACTG
GTATTACAATTGACCGCCAGCACTAATTCAAAAAAAAACGAGCGGGGCAT
TTATCCGGCAATCGATGTATAAATTCTCTTTCGAAACGCCAAAGCTCTGA
ATGTCGGGAAAAATTTCAACATCATGAAAACTTAAATTACAGAATTTCGC
CAGACAGTGTCAGGAATTTTGGCAGTGACCACCTACTACAAAATCCATGA
CACCGTCTGAAAACAGCCCTTGTTTTTGAAGTTTCTCGGTTCCAACCTTA
ATATTTTTAGGCTTAAGAACAAGGCCTGTTGATCCCATGGGGATATTGAC
TATAATTCTTCGCCGATGGGAAATTAGCCCGCTTCTTTAGAACTTTGGTG
CCAATCCACTAAGTACGCAAAATGATAAACATGTAAAAATGCTACCCTTA
AAAAGTTAAAAAAAAATTAATATCGTAATTTTTCAGAATTTCATACAGCC
AAAGGAAAGGTGATTCACAAGATACACGTCTTTCCAAAAGAATGGAAATT
GTCATTGAAAGTGTTGGTCAAAAATGATGACTACAGTAAAATGTCACCTC
TTCTGCACTTCGAAAGTAGTAGCTACGATTTTTTGTTTTCTATCGGGATG
CGACACCATAGAAAACTGTACATTTCGATCACAACTCCGACTTTCGGCCG
AGAAAGTCTGACAGGAAAGAAAGATGTTAGATTTGGAGAATGGATGTGGA
TCAAAGTCAGTTTATGTTCATTTCTTGGGAAATGGATGTTATATTGGACT
ATAGATGATGTTGTGCAGACAGAACACACTGTTCAAGGATGGGACATTTT
CACAGATGTGAAAGTTGAGGCGTCCAAAGAAAGATGGTAGAATCACACAT
GGCAAAATCAAAGACATGCTTTTCCAAAAATCAGGTACAGCAAAAAATTC
ACTGTTTCGTTTATCTCTCATTATACAAAGTTTTAGTTTGGGATTTGAAG
AAATATTTTGGCATCACCTGAAACGAAGTATGCAAGTTAATAAAGTTTTC
AAACGCAATCTTGGTGGACCCGAAGGCTCCCTTTTCTTTTAATCTAGTTA
GGGGAAGGAGGCACTCATTTCCCTGAATTTCGTTACCGACTCTTGTTCCT
TTTTAGAATCAAGGGGCACCAAGCACCCCTTTTTAGATGTGTTTTTTTTC
AAGACCAGCTAGGATGATATCCATAACAGTTGTTCATCTTTTCGGCATCT
TTGCTGCCAATTATTAATCTTTATTTTTACAATTTTCATTCAGTTCCCAT
AACATTCGACTGGCCCATTCTTGGAGGTATCATTCCTCGGTGGCACAAAT
CATGGGTTATCAAATTTTCCATGAAAATCTTACAAAACGTAACAATCACA
GCAAATTGGCCTGGTATTTTACAGTTCAGCTTCTCAAAATCACCCGTTAA
AAGTTACGGTCGTCGCCAGCCATGCGTTAAATATAATAAATCTACGAAGA
GATTGGAATTCTCCTACTACATGCCGCCAAGTTCCCCAAATATAGTTGCG
TACTCAAATGGCGTTACCAAAGGTGTTAAATATGACGTGGAAATGGAACT
GAGCTTGTTTTCGGATGGCAAATTTTACTTCTTGGTCTGGATAAATGGGG
TAGGTCATGTTAACAAGGAGCTTCCTGGACCAGCAGATGAATTTGTCAAC
ATGGAGTATCATTATGGTGGCCTTAATACAAATCATAGAAGTGACAAGGC
GTTCGAAGTTTCCAATCTGTTATATGGAGGTATTGAAGAATGATAAGATG
TATTGGCTGCAGTGTATGTGTTGCCGTATTAACGTTGATAACATTACTCA
AGGCTCTTCTTCACAAAAAAATCATTTCTGTCGGGACAGG

Coding sequence (CDS) from alignment at sc0000142_pilon:505803..508592-

>MSTRG.15755.1.p2 ID=MSTRG.15755.1.p2|Name=MSTRG.15755.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000142_pilon:505803..508592- (Clytia hemisphaerica_ch_hm2_pilon)
TTCCCATAACATTCGACTGGCCCATTCTTGGAGGTATCATTCCTCGGTGG
CACAAATCATGGGTTATCAAATTTTCCATGAAAATCTTACAAAACGTAAC
AATCACAGCAAATTGGCCTGGTATTTTACAGTTCAGCTTCTCAAAATCAC
CCGTTAAAAGTTACGGTCGTCGCCAGCCATGCGTTAAATATAATAAATCT
ACGAAGAGATTGGAATTCTCCTACTACATGCCGCCAAGTTCCCCAAATAT
AGTTGCGTACTCAAATGGCGTTACCAAAGGTGTTAAATATGACGTGGAAA
TGGAACTGAGCTTGTTTTCGGATGGCAAATTTTACTTCTTGGTCTGGATA
AATGGGGTAGGTCATGTTAACAAGGAGCTTCCTGGACCAGCAGATGAATT
TGTCAACATGGAGTATCATTATGGTGGCCTTAATACAAATCATAGAAGTG
ACAAGGCGTTCGAAGTTTCCAATCTGTTATATGGAGGTATTGAAGAATGA
ATGCTTTTCCAAAAATCAGTTCCCATAACATTCGACTGGCCCATTCTTGG
AGGTATCATTCCTCGGTGGCACAAATCATGGGTTATCAAATTTTCCATGA
AAATCTTACAAAACGTAACAATCACAGCAAATTGGCCTGGTATTTTACAG
TTCAGCTTCTCAAAATCACCCGTTAAAAGTTACGGTCGTCGCCAGCCATG
CGTTAAATATAATAAATCTACGAAGAGATTGGAATTCTCCTACTACATGC
CGCCAAGTTCCCCAAATATAGTTGCGTACTCAAATGGCGTTACCAAAGGT
GTTAAATATGACGTGGAAATGGAACTGAGCTTGTTTTCGGATGGCAAATT
TTACTTCTTGGTCTGGATAAATGGGGTAGGTCATGTTAACAAGGAGCTTC
CTGGACCAGCAGATGAATTTGTCAACATGGAGTATCATTATGGTGGCCTT
AATACAAATCATAGAAGTGACAAGGCGTTCGAAGTTTCCAATCTGTTATA
TGGAGGTATTGAAGAATGAATGCTTTTCCAAAAATCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15755MSTRG.15755Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15755.1.p2MSTRG.15755.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15755.1.p2.exon4MSTRG.15755.1.p2.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15755.1.p2.exon3MSTRG.15755.1.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15755.1.p2.exon2MSTRG.15755.1.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15755.1.p2.exon1MSTRG.15755.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000142_pilongenomesc0000142_pilon:505803..508592 -