TCONS_00012108 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012108
Unique NameTCONS_00012108
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length955

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012108 ID=TCONS_00012108|Name=TCONS_00012108|organism=Clytia hemisphaerica|type=transcript|length=955bp
ttagtgaaataaagaaatatacaaactaataatatataaacaataaaaaa
tcagatATTATGGCCTTGGTATTTCGAACATGTTTAAGGAACGTTCGAAG
CCTCACACCACAAAATCAGCAAGCGTTTGCAAGcaCATGGAAAATATACA
CCAAAACAGGCGACAAAGGTACGTCAGCTTTGTTCACTGGAGAGCGTCGA
CCAAAGAATGATGATTTCTTTGAAGCACTTGGATCTACAGATGAATTAAC
CTCTCATATCGGAATCGCTCGAGAATTTTGTAAAGATAAAGGGCACACAG
ATCTCATCGGACGTTTAGAGGAGATCCAATGCATATTACAAGAAGTCAGT
TCGAACGTTGCCACGCCTTCTGATTCAGAAAACACAAGCGTCAATACTGA
TGCCACAAAGTTTGATGGAAGTTACATTGACGATTTAGAGAAGTGGATAG
ACGAGTATGACGAGCAGTTACCTccattgaaaaatttcatactCCCTTCT
GGTGGCAAAAGCAGCGCTTCTTTGCACGTCGCGCGAACTGTTTGCAGACG
CACTGAACGACGtttGGTCCCTCTCATACAAACGTCAAGCATTGATGAAG
ACGTCTACAAATACGTTAATAGGCTAAGTGATTTCTTATTTAACGCCGCC
CGCTTCGCTGCACATTGTGAAAACGAACACGAGCTAGTCTACAAACGAAG
GAGAAAAATTGTGGAGAAAAGATAACGGTATCCAGGCAAGGTGGCTAACA
AGCCCgcagaaaaaaatataatttaatttttttagaatcgtaaattattt
tttttgtaataaacatgatgattgaaaatatatttaaaactttaaactga
GAATTTCGCAAATTGTTTTCTTTCCTAACCTCTCGGGGATAAATTGAACT
TtataccgtcgttttgtataaaATTCTAatttctgcactaagattcttgt
cttTT
Run BLAST on NCBI

protein sequence of TCONS_00012108-protein

>TCONS_00012108-protein ID=TCONS_00012108-protein|Name=TCONS_00012108-protein|organism=Clytia hemisphaerica|type=polypeptide|length=221bp
MALVFRTCLRNVRSLTPQNQQAFASTWKIYTKTGDKGTSALFTGERRPKN
DDFFEALGSTDELTSHIGIAREFCKDKGHTDLIGRLEEIQCILQEVSSNV
ATPSDSENTSVNTDATKFDGSYIDDLEKWIDEYDEQLPPLKNFILPSGGK
SSASLHVARTVCRRTERRLVPLIQTSSIDEDVYKYVNRLSDFLFNAARFA
AHCENEHELVYKRRRKIVEKR
Run BLAST on NCBI

transcript from alignment at sc0000137:59378..65748-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012108 ID=TCONS_00012108|Name=TCONS_00012108|organism=Clytia hemisphaerica|type=transcript|length=6371bp|location=Sequence derived from alignment at sc0000137:59378..65748- (Clytia hemisphaerica)
TTAGTGAAATAAAGAAATATACAAACTAATAATATATAAACAATAAAAAA
TCAGATATTATGGCCTTGGTATTTCGAACATGTTTAAGGAACGTTCGAAG
CCTCACACCACAAAATCAGCAAGCGTTTGCAAGGTTTGTCAGTAATTTTT
TTTTCATTTTTTAACGTTTTTTTTTTTCGAAAGATGATAACTATTAATTT
TTTTGCTCCCGTTCAAGATTCACTGTTATTGCCGTTTACAGATGTAAGGA
ATGCTAATTTTCAATAACTTTTACCACTACGTTTATTGATTTCTGTTTTC
TGATCTCTGATTTTTTTTTGGATTTCAGCACATGGAAAATATACACCAAA
ACAGGCGACAAAGGTGTGTTCTTTTGACTTTATCTCGCAACAATTGCACT
ATGTTGTTAAAATCTTCGAAATTTTTAACATCCTGTCTTTCGGAGTTTAG
TCCCTTACTCCAAAGCTCCTTATAAACGAATAAGACAAAAATGATATCCA
AGAGAAATAGCAATTCTTGAATTAGTAGACGAATTAAGTTAACATTTCTA
TTTATCCATTCATCAGGTACGTCAGCTTTGTTCACTGGAGAGCGTCGACC
AAAGAATGATGATTTCTTTGAAGCACTTGGATCTACAGATGAATTAACCT
CTCATATCGGGTAATAAAGTAAAGCCTCTGGTTTTTTATTTCTATAGTTT
TAGTATACACCTATTAGTCGCAACTGTAAATTACGAAATTTTGGCAACAA
TACCCCTCTCACTATCATTGGAATCATTGAATAGTTAGGTTTGAAAAGTA
CAGCGGAAATGGCCATTATCACTGCTTGGTAGTGTGTCCTTCAAACGACG
AATTAAAAGTTGGTCTATTAATGTGACATTTATTAACGCATTGACCTGAG
AACTTCTGTTGGCATGTTGCTTGGTGAAACGTTTCTAAATTTTGAACTAT
ACACTTTTTTAGAATCGCTCGAGAATTTTGTAAAGATAAAGGGCACACAG
ATCTCATCGGACGTTTAGAGGAGGTAAAAACCCATTCTTCACAAGTTTCA
TTCAACTTCTTCTGTTTAAACAAAACAAACTAAATTCAGGTTTTTAAAAT
ACACAATACATACTCCCTATATAATCATCGGACCATAGTGATTGTTTGCA
TGTAGATCAGACGATTGTAAGCTTCCCCCAACCATTCGGTACAGAACACA
ACATATAAAAAATTGACCGGTTTCATAAAATTATCTTTCCAACGGTATAT
AAAACCTTTATTATTATCTTGGGCTATCAGGGAGCATCAAGATGCGCATA
ATACGCAGAGAACGAGGTTGGATAGAGCACGTAGATTTTCATTGGCCCGT
TTATGTCCATTTGTCAAGGATGTGGCTAAACGGACCTGAGTTTGAGAGTT
TGTAATATGAAGGGAGAAGAATACGAGCGTGCAATTGTCACAAAACCTTT
TCAAATTCATTCGATTCTTCTATGCCCGCCCTCTTTTTGTTTAGATCCAA
TGCATATTACAAGAAGTCAGTTCGAACGTTGCCACGCCTTCTGATTCAGA
AAACACAAGCGTCAATACTGGTGCGTATGGTGAAATCTTTCATTTGCTTC
TAAAGCTAGAACTTTTTTTTGGGTGTGATAGATACTTCTATTTGTTTTCA
TACCGGTTAATGTTCAATACCTTATCGGGGAAAACTTCGTCGGGGAAAAG
TGACGAAATTTTGGACAAGTGACGAATATTTTCCCCGACGAAAATTTTCC
CCAGCCTTAATGCGTTTACCAACTACCAGCAAGTGACGAATTTATCCCCG
ACGAAGTTTTCCCCGATAAGGTATGTTAAGTCTAAGAACAACCTATCAAA
ATGGAATAATATGATGGTCGACAAACAGGAACCTAACCTTTGGAATTCAT
TGTTAGATAATTGTTATTTTTACCAAAAGTTTTTTGGTGATGTTTTTGTT
TTGTTTTCTACATCAAACATTTTTATGCAAAAAAGAAATGACTATGTAAA
TCGTAAATGCTTCAAACCGCACACAATTGTTTGATTAAATGTTTGATTAG
ATTAATGATTTTGGTTTTAGATGCCACAAAGTTTGATGGAAGTTACATTG
ACGATTTAGAGAAGTGGATAGACGAGTATGACGAGCAGTTACCTCCATTG
AAAAATTTCATACTCCCTGTAAGTTGAATTAAACCTTCATGTCCTGAAGA
GACATCTCTGAAATGTCTCAAAAGGGTGACAGTACAAACCTCAAGCTCTG
ACCACCTTCAAAAAGACTTTGTCAGTCTTTTTTACACCATTCCGGATTCA
GACGTCCTTTACCAGCAACCAAAGAAGCTAGGTTTTTTGTTGAGTTTTAG
AAGAATCTTTATGCAGTCGTCTTATTTCAAACTGAATAAACAACAAAACA
TCGCCCTTCTAACGCCCCTGATGACCTTATATATAAAGTTTGATCAACAT
CGACTGATTTCTATAACTAACTTTAAACTACTCTATTTCTTTCAGTCTGG
TGGCAAAAGCAGCGCTTCTTTGCACGTCGCGCGAACTGTTTGCAGACGCA
CTGAACGACGGTAAGAACAATTGAAAAAAGGGGAAATCCCTGCAAAATTT
TAAACAACACAAATGATTCTTAAGCGCTCTAATTCACTTCTGGAACGAAG
AGTTTTAACTTTGTGTTTAAACCAGGGACTTAACCTTTACCACGCCGAGG
CCGTAAATTTACGTTCTAATATATAGCCGAGGCCGTAAATATACGTTTTT
CATGGGGTGTTAAGAAAAGCCGCCCTACCGCCTTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCAAAAA
GACAAGGCGTGCACGGGGTGAAGTTCCCAAAGAGAAGGCGTGGTAAAGGT
TAAGACTAATAGCTCAGGATCCAAAAGTTCCAAATTTTTCTATTAGGTTT
AATTAGGCTGAGAATTAACCTAAGCCACTTAACCCCTCCAAAATCGGAAT
ATCCAATGAAACAAAGTGAAAGTACTAAAATCGTAATTCTCTCCAAATCT
CACAACAAGTCATTAAATGAACAAATTTGACCGAGGTTCTCTCTTCACCC
TGACTTATGTGGTGGGATAGTACAATAGTTCTGTATGAAGAAAATTACAT
TGCTTTTCTACAGGACCTATCACTATTGAAGTGTTCAAAGTTTTTCCCGT
CTCAGACGGATTCCCATCTTAGCGAAATATACTAGGTCACAGTGTGGATC
TAAACCACACTGAAACGACCGCCTTCCATCACGCATCACGCTCGCGAAAG
AGCGTGTGCACATTATTAGCGCATACACATGTCATCTCCAGTACATTTTA
GATTATTCATTGAAAACAGATTACAGTATAGTCATTTTTCATGTCTCGAT
TATTCAATTCCGAATAAAACACATTCAGGGAAAAAAAAGAGAAACAACTG
GGTAATCTAGTTAAAAAAAACGAAAGTAAATGACAGACAAAGTAATGAGC
CAAGTCAAAACGAGATTAGCGTACCACTATGAAAGGAACCGCCTCCGGCG
GTCGCTAAAGAGGCTTTTCCGTCAACATGAGATTTTACATGATTCACAAA
AATCTCTGTGTGTTATAACTAATTAATTGGCCATTCCATTTTATCCATAC
AGAGGGGGTGGACGAACATTTCCAGAGGGTAATCCGAGAAGAATTTCCAG
GGGTTATCTTTTCATTTTTCCAAAGGGGTAAAAAGTTATTCCTAAATTTC
CAGGGAGTTAAGACTGATTTTAGCTCGTCCACCCTATATTTAGGTATCAA
AAAAATCTTTTCAAGGATATTCTTTTGCAAATTTTGCCATTTTCCAGGGG
ATATCCACACATTTTCAATATTTTTTTTGACTTGAAAAGGTTCGTCTGGA
ACAGCCCAATTGACTGCGTATAATCCACTTTTTGTCTCTAACGAAAACCT
TGCTTTGAACACTGCTATTGGAAATTACTTAAAATTTAAGCCTGAATCGA
AGTATCCATCCATGTGTTTGTTTTCTTTTCAGTTTGGTCCCTCTCATACA
AACGTCAAGCATTGATGAAGACGTCTACAAATACGTTAATAGGTATCTCT
TATAACTTTCATTTAAAATCTTGGCTTTAGACAGCCTACTTTCTGCCTAC
TTTAATTCACAATTAGAATAGAGAGTGGCTGTTTATTCATACTCGTGTGT
AACAGCAATAGGATTTGATGGAAAGCTATCTCTTTTGGGCTCAACACGAT
GTTTGTCTTTGACGGCATTTTGTTTAATCAGTTGGAATTGTCAGAGGTGA
TCTCTTTGATTGATCGAAAAAACTCATTTTTGAACAACCATGCGGTATAC
ATAAGTTATAATGAGTAGACGAATGTATAACTGACCACACGAACAAGTGT
TCCCTTTCTCCTTCCATCAATTTGTTGATTGCATCATTTAATAAGACATT
GTTCATTTAATGTTTCCAGCTGATCCAAATAGAGACATATTCTTTAAACC
GCTAGTCGTTAAATAGCGTAAAGTATAACAACTGACACTGCTGGCTAAAT
AGATCATAGCTGAAAAGTCCTAAATAAGCACGAAATGCGCAAACCTGCTC
TGCCACCCAAATCTTCTGAGTGAATAAAGTTTGACAGTAAATTTTTTATT
TCATACATATGATATCATATGATATCAAGCATACATAAGTATCAAATGAC
ACACCAATAATCTAAAAAAAAGTGAAATTTGCCCTAAAGAAATTATTATT
CTATCGGTTACGCTTAACCGCTCCTCCCAGATCCAAAATTCTTATATTTT
CCACTACCATAACAACTTTCTCAATCATCCCAATGTATAACAAAGCTGGT
CTACTGTAACTTACCAAAATTCCGATATTTTCCACTACCCTAACAACTTT
CTCACCCATCCAAATGTATAACAAAAGTTGGTCTAACTTACTTTAAGAAG
TTGTGAAAAATCCGGGAAAAGATTTAATGATTATTTCCTATCTGTTCTTT
TCTCGTCAAAGAAAATACTTTTTCTATTCAACAATCAGGCTAAGTGATTT
CTTATTTAACGCCGCCCGCTTCGCTGCACATTGTGAAAACGAACACGAGC
TAGTCTACAAACGAAGGAGAAAAATTGTGGAGAAAAGATAACGGTATCCA
GGCAAGGTGGCTAACAAGCCCGCAGAAAAAAATATAATTTAATTTTTTTA
GAATCGTAAATTATTTTTTTTGTAATAAACATGATGATTGAAAATATATT
TAAAACTTTAAACTGAGAATTTCGCAAATTGTTTTCTTTCCTAACCTCTC
GGGGATAAATTGAACTTTATACCGTCGTTTTGTATAAAATTCTAATTTCT
GCACTAAGATTCTTGTCTTTT

Coding sequence (CDS) from alignment at sc0000137:59378..65748-

>TCONS_00012108 ID=TCONS_00012108|Name=TCONS_00012108|organism=Clytia hemisphaerica|type=CDS|length=5994bp|location=Sequence derived from alignment at sc0000137:59378..65748- (Clytia hemisphaerica)
GCTAAGTGATTTCTTATTTAACGCCGCCCGCTTCGCTGCACATTGTGAAA
ACGAACACGAGCTAGTCTACAAACGAAGGAGAAAAATTGTGGAGAAAAGA
TAATTTGGTCCCTCTCATACAAACGTCAAGCATTGATGAAGACGTCTACA
AATACGTTAATAGTCTGGTGGCAAAAGCAGCGCTTCTTTGCACGTCGCGC
GAACTGTTTGCAGACGCACTGAACGACGATGCCACAAAGTTTGATGGAAG
TTACATTGACGATTTAGAGAAGTGGATAGACGAGTATGACGAGCAGTTAC
CTCCATTGAAAAATTTCATACTCCCTATCCAATGCATATTACAAGAAGTC
AGTTCGAACGTTGCCACGCCTTCTGATTCAGAAAACACAAGCGTCAATAC
TGAATCGCTCGAGAATTTTGTAAAGATAAAGGGCACACAGATCTCATCGG
ACGTTTAGAGGAGGTACGTCAGCTTTGTTCACTGGAGAGCGTCGACCAAA
GAATGATGATTTCTTTGAAGCACTTGGATCTACAGATGAATTAACCTCTC
ATATCGGCACATGGAAAATATACACCAAAACAGGCGACAAAGATGGCCTT
GGTATTTCGAACATGTTTAAGGAACGTTCGAAGCCTCACACCACAAAATC
AGCAAGCGTTTGCAAGGCTAAGTGATTTCTTATTTAACGCCGCCCGCTTC
GCTGCACATTGTGAAAACGAACACGAGCTAGTCTACAAACGAAGGAGAAA
AATTGTGGAGAAAAGATAATTTGGTCCCTCTCATACAAACGTCAAGCATT
GATGAAGACGTCTACAAATACGTTAATAGTCTGGTGGCAAAAGCAGCGCT
TCTTTGCACGTCGCGCGAACTGTTTGCAGACGCACTGAACGACGATGCCA
CAAAGTTTGATGGAAGTTACATTGACGATTTAGAGAAGTGGATAGACGAG
TATGACGAGCAGTTACCTCCATTGAAAAATTTCATACTCCCTATCCAATG
CATATTACAAGAAGTCAGTTCGAACGTTGCCACGCCTTCTGATTCAGAAA
ACACAAGCGTCAATACTGAATCGCTCGAGAATTTTGTAAAGATAAAGGGC
ACACAGATCTCATCGGACGTTTAGAGGAGGTACGTCAGCTTTGTTCACTG
GAGAGCGTCGACCAAAGAATGATGATTTCTTTGAAGCACTTGGATCTACA
GATGAATTAACCTCTCATATCGGCACATGGAAAATATACACCAAAACAGG
CGACAAAGATGGCCTTGGTATTTCGAACATGTTTAAGGAACGTTCGAAGC
CTCACACCACAAAATCAGCAAGCGTTTGCAAGGCTAAGTGATTTCTTATT
TAACGCCGCCCGCTTCGCTGCACATTGTGAAAACGAACACGAGCTAGTCT
ACAAACGAAGGAGAAAAATTGTGGAGAAAAGATAATTTGGTCCCTCTCAT
ACAAACGTCAAGCATTGATGAAGACGTCTACAAATACGTTAATAGTCTGG
TGGCAAAAGCAGCGCTTCTTTGCACGTCGCGCGAACTGTTTGCAGACGCA
CTGAACGACGATGCCACAAAGTTTGATGGAAGTTACATTGACGATTTAGA
GAAGTGGATAGACGAGTATGACGAGCAGTTACCTCCATTGAAAAATTTCA
TACTCCCTATCCAATGCATATTACAAGAAGTCAGTTCGAACGTTGCCACG
CCTTCTGATTCAGAAAACACAAGCGTCAATACTGAATCGCTCGAGAATTT
TGTAAAGATAAAGGGCACACAGATCTCATCGGACGTTTAGAGGAGGTACG
TCAGCTTTGTTCACTGGAGAGCGTCGACCAAAGAATGATGATTTCTTTGA
AGCACTTGGATCTACAGATGAATTAACCTCTCATATCGGCACATGGAAAA
TATACACCAAAACAGGCGACAAAGATGGCCTTGGTATTTCGAACATGTTT
AAGGAACGTTCGAAGCCTCACACCACAAAATCAGCAAGCGTTTGCAAGGC
TAAGTGATTTCTTATTTAACGCCGCCCGCTTCGCTGCACATTGTGAAAAC
GAACACGAGCTAGTCTACAAACGAAGGAGAAAAATTGTGGAGAAAAGATA
ATTTGGTCCCTCTCATACAAACGTCAAGCATTGATGAAGACGTCTACAAA
TACGTTAATAGTCTGGTGGCAAAAGCAGCGCTTCTTTGCACGTCGCGCGA
ACTGTTTGCAGACGCACTGAACGACGATGCCACAAAGTTTGATGGAAGTT
ACATTGACGATTTAGAGAAGTGGATAGACGAGTATGACGAGCAGTTACCT
CCATTGAAAAATTTCATACTCCCTATCCAATGCATATTACAAGAAGTCAG
TTCGAACGTTGCCACGCCTTCTGATTCAGAAAACACAAGCGTCAATACTG
AATCGCTCGAGAATTTTGTAAAGATAAAGGGCACACAGATCTCATCGGAC
GTTTAGAGGAGGTACGTCAGCTTTGTTCACTGGAGAGCGTCGACCAAAGA
ATGATGATTTCTTTGAAGCACTTGGATCTACAGATGAATTAACCTCTCAT
ATCGGCACATGGAAAATATACACCAAAACAGGCGACAAAGATGGCCTTGG
TATTTCGAACATGTTTAAGGAACGTTCGAAGCCTCACACCACAAAATCAG
CAAGCGTTTGCAAGGCTAAGTGATTTCTTATTTAACGCCGCCCGCTTCGC
TGCACATTGTGAAAACGAACACGAGCTAGTCTACAAACGAAGGAGAAAAA
TTGTGGAGAAAAGATAATTTGGTCCCTCTCATACAAACGTCAAGCATTGA
TGAAGACGTCTACAAATACGTTAATAGTCTGGTGGCAAAAGCAGCGCTTC
TTTGCACGTCGCGCGAACTGTTTGCAGACGCACTGAACGACGATGCCACA
AAGTTTGATGGAAGTTACATTGACGATTTAGAGAAGTGGATAGACGAGTA
TGACGAGCAGTTACCTCCATTGAAAAATTTCATACTCCCTATCCAATGCA
TATTACAAGAAGTCAGTTCGAACGTTGCCACGCCTTCTGATTCAGAAAAC
ACAAGCGTCAATACTGAATCGCTCGAGAATTTTGTAAAGATAAAGGGCAC
ACAGATCTCATCGGACGTTTAGAGGAGGTACGTCAGCTTTGTTCACTGGA
GAGCGTCGACCAAAGAATGATGATTTCTTTGAAGCACTTGGATCTACAGA
TGAATTAACCTCTCATATCGGCACATGGAAAATATACACCAAAACAGGCG
ACAAAGATGGCCTTGGTATTTCGAACATGTTTAAGGAACGTTCGAAGCCT
CACACCACAAAATCAGCAAGCGTTTGCAAGGCTAAGTGATTTCTTATTTA
ACGCCGCCCGCTTCGCTGCACATTGTGAAAACGAACACGAGCTAGTCTAC
AAACGAAGGAGAAAAATTGTGGAGAAAAGATAATTTGGTCCCTCTCATAC
AAACGTCAAGCATTGATGAAGACGTCTACAAATACGTTAATAGTCTGGTG
GCAAAAGCAGCGCTTCTTTGCACGTCGCGCGAACTGTTTGCAGACGCACT
GAACGACGATGCCACAAAGTTTGATGGAAGTTACATTGACGATTTAGAGA
AGTGGATAGACGAGTATGACGAGCAGTTACCTCCATTGAAAAATTTCATA
CTCCCTATCCAATGCATATTACAAGAAGTCAGTTCGAACGTTGCCACGCC
TTCTGATTCAGAAAACACAAGCGTCAATACTGAATCGCTCGAGAATTTTG
TAAAGATAAAGGGCACACAGATCTCATCGGACGTTTAGAGGAGGTACGTC
AGCTTTGTTCACTGGAGAGCGTCGACCAAAGAATGATGATTTCTTTGAAG
CACTTGGATCTACAGATGAATTAACCTCTCATATCGGCACATGGAAAATA
TACACCAAAACAGGCGACAAAGATGGCCTTGGTATTTCGAACATGTTTAA
GGAACGTTCGAAGCCTCACACCACAAAATCAGCAAGCGTTTGCAAGGCTA
AGTGATTTCTTATTTAACGCCGCCCGCTTCGCTGCACATTGTGAAAACGA
ACACGAGCTAGTCTACAAACGAAGGAGAAAAATTGTGGAGAAAAGATAAT
TTGGTCCCTCTCATACAAACGTCAAGCATTGATGAAGACGTCTACAAATA
CGTTAATAGTCTGGTGGCAAAAGCAGCGCTTCTTTGCACGTCGCGCGAAC
TGTTTGCAGACGCACTGAACGACGATGCCACAAAGTTTGATGGAAGTTAC
ATTGACGATTTAGAGAAGTGGATAGACGAGTATGACGAGCAGTTACCTCC
ATTGAAAAATTTCATACTCCCTATCCAATGCATATTACAAGAAGTCAGTT
CGAACGTTGCCACGCCTTCTGATTCAGAAAACACAAGCGTCAATACTGAA
TCGCTCGAGAATTTTGTAAAGATAAAGGGCACACAGATCTCATCGGACGT
TTAGAGGAGGTACGTCAGCTTTGTTCACTGGAGAGCGTCGACCAAAGAAT
GATGATTTCTTTGAAGCACTTGGATCTACAGATGAATTAACCTCTCATAT
CGGCACATGGAAAATATACACCAAAACAGGCGACAAAGATGGCCTTGGTA
TTTCGAACATGTTTAAGGAACGTTCGAAGCCTCACACCACAAAATCAGCA
AGCGTTTGCAAGGCTAAGTGATTTCTTATTTAACGCCGCCCGCTTCGCTG
CACATTGTGAAAACGAACACGAGCTAGTCTACAAACGAAGGAGAAAAATT
GTGGAGAAAAGATAATTTGGTCCCTCTCATACAAACGTCAAGCATTGATG
AAGACGTCTACAAATACGTTAATAGTCTGGTGGCAAAAGCAGCGCTTCTT
TGCACGTCGCGCGAACTGTTTGCAGACGCACTGAACGACGATGCCACAAA
GTTTGATGGAAGTTACATTGACGATTTAGAGAAGTGGATAGACGAGTATG
ACGAGCAGTTACCTCCATTGAAAAATTTCATACTCCCTATCCAATGCATA
TTACAAGAAGTCAGTTCGAACGTTGCCACGCCTTCTGATTCAGAAAACAC
AAGCGTCAATACTGAATCGCTCGAGAATTTTGTAAAGATAAAGGGCACAC
AGATCTCATCGGACGTTTAGAGGAGGTACGTCAGCTTTGTTCACTGGAGA
GCGTCGACCAAAGAATGATGATTTCTTTGAAGCACTTGGATCTACAGATG
AATTAACCTCTCATATCGGCACATGGAAAATATACACCAAAACAGGCGAC
AAAGATGGCCTTGGTATTTCGAACATGTTTAAGGAACGTTCGAAGCCTCA
CACCACAAAATCAGCAAGCGTTTGCAAGGCTAAGTGATTTCTTATTTAAC
GCCGCCCGCTTCGCTGCACATTGTGAAAACGAACACGAGCTAGTCTACAA
ACGAAGGAGAAAAATTGTGGAGAAAAGATAATTTGGTCCCTCTCATACAA
ACGTCAAGCATTGATGAAGACGTCTACAAATACGTTAATAGTCTGGTGGC
AAAAGCAGCGCTTCTTTGCACGTCGCGCGAACTGTTTGCAGACGCACTGA
ACGACGATGCCACAAAGTTTGATGGAAGTTACATTGACGATTTAGAGAAG
TGGATAGACGAGTATGACGAGCAGTTACCTCCATTGAAAAATTTCATACT
CCCTATCCAATGCATATTACAAGAAGTCAGTTCGAACGTTGCCACGCCTT
CTGATTCAGAAAACACAAGCGTCAATACTGAATCGCTCGAGAATTTTGTA
AAGATAAAGGGCACACAGATCTCATCGGACGTTTAGAGGAGGTACGTCAG
CTTTGTTCACTGGAGAGCGTCGACCAAAGAATGATGATTTCTTTGAAGCA
CTTGGATCTACAGATGAATTAACCTCTCATATCGGCACATGGAAAATATA
CACCAAAACAGGCGACAAAGATGGCCTTGGTATTTCGAACATGTTTAAGG
AACGTTCGAAGCCTCACACCACAAAATCAGCAAGCGTTTGCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006809XLOC_006809Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012108-exon-sc0000137-1575043694:65616..65748TCONS_00012108-exon-sc0000137-1575043694:65616..65748Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1575043694:65386..65420TCONS_00012108-exon-sc0000137-1575043694:65386..65420Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1575043694:65089..65182TCONS_00012108-exon-sc0000137-1575043694:65089..65182Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1575043694:64726..64786TCONS_00012108-exon-sc0000137-1575043694:64726..64786Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1575043694:64179..64254TCONS_00012108-exon-sc0000137-1575043694:64179..64254Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1575043694:63581..63678TCONS_00012108-exon-sc0000137-1575043694:63581..63678Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1575043694:63189..63253TCONS_00012108-exon-sc0000137-1575043694:63189..63253Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1575043694:60657..60716TCONS_00012108-exon-sc0000137-1575043694:60657..60716Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1575043694:59378..59710TCONS_00012108-exon-sc0000137-1575043694:59378..59710Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1510915933:65616..65748TCONS_00012108-exon-sc0000137-1510915933:65616..65748Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1510915933:65386..65420TCONS_00012108-exon-sc0000137-1510915933:65386..65420Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1510915933:65089..65182TCONS_00012108-exon-sc0000137-1510915933:65089..65182Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1510915933:64726..64786TCONS_00012108-exon-sc0000137-1510915933:64726..64786Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1510915933:64179..64254TCONS_00012108-exon-sc0000137-1510915933:64179..64254Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1510915933:63581..63678TCONS_00012108-exon-sc0000137-1510915933:63581..63678Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1510915933:63189..63253TCONS_00012108-exon-sc0000137-1510915933:63189..63253Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1510915933:60657..60716TCONS_00012108-exon-sc0000137-1510915933:60657..60716Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1510915933:59378..59710TCONS_00012108-exon-sc0000137-1510915933:59378..59710Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1491911889:65616..65748TCONS_00012108-exon-sc0000137-1491911889:65616..65748Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1491911889:65386..65420TCONS_00012108-exon-sc0000137-1491911889:65386..65420Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1491911889:65089..65182TCONS_00012108-exon-sc0000137-1491911889:65089..65182Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1491911889:64726..64786TCONS_00012108-exon-sc0000137-1491911889:64726..64786Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1491911889:64179..64254TCONS_00012108-exon-sc0000137-1491911889:64179..64254Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1491911889:63581..63678TCONS_00012108-exon-sc0000137-1491911889:63581..63678Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1491911889:63189..63253TCONS_00012108-exon-sc0000137-1491911889:63189..63253Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1491911889:60657..60716TCONS_00012108-exon-sc0000137-1491911889:60657..60716Clytia hemisphaericaexon
TCONS_00012108-exon-sc0000137-1491911889:59378..59710TCONS_00012108-exon-sc0000137-1491911889:59378..59710Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012108-proteinTCONS_00012108-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000137supercontigsc0000137:59378..65748 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
82.2266	80.323	81.8471	92.8761	63.2999	45.4086	24.3347	27.9907	26.8907	34.1028	28.5719	27.1753	14.9921	17.6716	19.3893	26.3429	38.0217	38.971	10.3131	12.5377	25.0597	26.9136	50.2205	38.0729	18.688	18.1369	30.3881	22.2702	38.533	36.9465
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029499PduO-typ
IPR016030AdoCbl_synth_CblAdoTrfase-like
Blast
[Close]
BLAST of TCONS_00012108 vs. Swiss-Prot (Human)
Match: MMAB (Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial OS=Homo sapiens GN=MMAB PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.830e-65
Identity = 105/195 (53.85%), Postives = 130/195 (66.67%), Query Frame = 3 
Query:  108 PQNQQAFASTWKIYTKTGDKGTSALFTGERRPKNDDFFEALGSTDELTSHIGIAREFCKDKGHTDLIGRLEEIQCILQEVSSNVATPSDSENTSVNTDATKFDGSYIDDLEKWIDEYDEQLPPLKNFILPSGGKSSASLHVARTVCRRTERRLVPLIQTSSIDEDVYKYVNRLSDFLFNAARFAAHCENEHELVY 692
            PQ         KIYTKTGDKG S+ FTGERRPK+D  FEA+G+TDEL+S IG A E   +KGHT     L++IQC LQ+V S +ATP  S   + +   T F    I +LE+WID+Y  QLPPL  FILPSGGK S++LH  R VCRR ERR+VPL+Q    D +V K++NRLSD+LF  AR+AA  E   E +Y
Sbjct:   46 PQPSSKTPRIPKIYTKTGDKGFSSTFTGERRPKDDQVFEAVGTTDELSSAIGFALELVTEKGHT-FAEELQKIQCTLQDVGSALATPCSSAREA-HLKYTTFKAGPILELEQWIDKYTSQLPPLTAFILPSGGKISSALHFCRAVCRRAERRVVPLVQMGETDANVAKFLNRLSDYLFTLARYAAMKEGNQEKIY 238
The following BLAST results are available for this feature:
BLAST of TCONS_00012108 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MMAB2.830e-6553.85Cob(I)yrinic acid a,c-diamide adenosyltransferase,... [more]
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