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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000115_pilon:277564..282369+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14039.3.p1 ID=MSTRG.14039.3.p1|Name=MSTRG.14039.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4806bp|location=Sequence derived from alignment at sc0000115_pilon:277564..282369+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTGGTTTTCTACACATAagttaaaagaaataaaaattgagtGAAGTAGG
AAGCATAGACGATTGTTCAAGATGGCTGCCGCTTCTACATCATCTGAAAA
ACTCAATTCTTGTGTAAAAACAGATGTATTTTTATCCCACGATTGGGGTG
AAGATGGTATAACTAATCACAAAAAGGTCGAGAAAATCAACGAGGCGATC
AAAGGATTGGGATATGTGACTTGGTTCGACAATGAACGAATGGTTGGTAA
CGTACGAGAACAGATGGCAAACGGAATCCTAAACACCAAATGTTTTATTG
CTTTCATTACAAAGCATTATCATAACAAAGTGGTCTTCGGTCTTGATAAA
GATAATTGTCGagctgaatttaattttgccAGCATGAAAGTCCCAATGGT
TGCTGTACTTCTTGATCCATCGATGAAAAACCCTCATGATTGGAAAGGGA
ATCTAGGATTCACACTCGCAACACAATTATATATTGATTTGTCTGGTGAT
ATCAATGATGAAAAGTATTTGACGAATCAACTCAAACTTCTGAAAAAAGA
TTTGACGTCCAAAGGAATCTTCCCAAATAAATTAGAAGAGACAGCGAATG
AATTGAAAGGTAATTTTTGTCTCGTTTTGTAGAAATCGTATCGATATAAA
GGCCAGCTTTAAGAAAACTAACCACCCAAGAAATTATTGactaaattttc
ttaatttcaacTATAAACATACGagtaaaagtgtgataactggtttaaCG
ATTTAACGGATTATCTTTTTGTACGGCCCATTTAAAATGTTGATTTCATT
ATATTCACTTTAATTACAAAATCATTTCCCTCCCTTTTCTACGGAAGCCC
ATTAGTGCCATTTAGATTTTCCTTTAGTTTTTTAAcgacgaaactaaaaa
aattgacgacaaaactaaaaaattgacaacaaaaataaaaaattgacgac
gaaaatgaaaaattgacgacgaaactgaaaataaattgttactTTGTTTC
GTTGTCgaaaaaattgacaacgaaactaaaaaaattgacgacaaaactaa
aaaattgacgacgaaactgaaaataaattgttacttcgtttcgtcgtcga
aaaaaaTCGACAACGAAACtagaaaatatttgagaatGGTGGCCCTGGTG
GTTGAAAATTAATTCTGGTGGATTATGAAGTGGGATTTGATAGTTCCGGT
GAATGCAATGCTGGTGAAGATGGTTCTTGTGAATGAGATGCTGGTAATGA
TGAACTAGAATAAGGATGTGATGGTGGCCCGGGGATGCTGGCCCGGGGAT
GGTGGAGATTGTTGGAATCAACGGTGTCAATGGAATCATTGGAATTAATC
AATagcaaatgatggaatcaatggagcagatgatggaatcaataatggag
cagatgatggaatcaatggtgcaaatgATGAAATAAATAGAACAGATGAT
GGAATCCATTGTGCGGGTGATGGAACCAACTATTGATTCTATCATTTGCA
CCattcatttcatcattgattagtTCCAATGATTTCATTGACACCCCAGT
GACTCCAACATCTCCACTATCACATCCTTATTCTGGTTCATCATTGCCAG
CATCTTATTCACAAGAACCATCTTCACCagcattgcattcaccagaacta
tCAAATCCATTTTCAGAATCCACCAGAATCAATaatatttccatttttca
accatcagggccaccattttcaattttttttagttttatagttcgatttt
ttcgacgacgaaaagaagtaacaatttattttcagtttcgtcgtcaattt
ttcagtttcgtcgtcaatttctttagtttcgtcgttAAAAAACTAAAGGA
GAATCTAAATGGCACTAATGGGCTTCCgtacttttttgtttatttattcg
GTTATTCAATTCGCATTTTACGTTTTTGTGATAAGAACATTCATTCATGT
TCACGTTATCGATATCTGAAATTACCCGAAAATGCGAAATCTTTCGGTAT
CCGAattttcttgtcgaatatctcAAAAATTATTATACTCAAGTCAACGC
CCCAGTAATAAATATTACGCTTACAGTTTTAGATATTCGATGGGAAGGCG
ATCCTTTGGTGAAGAACGCTGTTGAAAATCAAGAAACAATACAGGATGAA
AGCATTGAGAAATTGAAGGGGAAAGTAAATAATCTACGGAGAAATGGGGA
GTGGGCCGAAGCTATTCCTCTTTATGAAGATATTATTAAGAAACAATCTT
CCACTTTCGGTGAGAACCACAAGGATACTCTGGATACCAGATACTGGTTG
GCTCTTTGTCATTGCCAGCAAAATGATTACCAAAAAGCCATACCAATTTT
CCAGGATGTAGCCGACAAACAATCTTCCACTTCAGGTGAAAACGACAAGA
ATACTCTGAATACCAGATACTGCTTGGCTCTATGTTATTACGAACAAAAT
GATTACCAAAAAGCCATACCAATCTTCCAGGATGTAGCTGACAAACGAAC
TTCCACTTTGGGTGAGAACCACGAGGATACTCTGAATACCAGATACTGCT
TGGCTCTTTGTTATTACGAACAAAATGATTACCAAAAAGCCATACCAATT
TTCCAGGATGTAGCTGACAAACGAACTTCCACTTTAGGTGAAAATGAAGC
AGATACTCTGGATACCAGATACTGGTTGGCTCTTCGTCATTACCAGCAAA
ATGATTACAAAAAAGCCATACCAATTTTCCAGGATGTAGCCGAGAAACAA
TCTTCCACTTTAGGTGAGAACCACGAGGATACTCTGAATACCAGATACTG
GTTGGCTTTTTGTTATCACCAACAAAATGATTACCAAAAAGCCATACCAA
TCTTCCAGGATGTAGCTGACAAACGAACTTCCACTTTAGGTGAAAATGAA
GCAGATACTCTGGATACCAGATACTGGTTGGCTCTTTGTCATTACCAGCA
AAATGATTACAAAAAAGCCATACCAATTTTCCAGGATGTAGCCGAGAAAC
AATCTTCCACTTTAGGTGAGAACCACGAGGATACTCTGAATACCAGATAC
TGGTTGGCTTTTTGTTATCACCAACAAAATGATTACCAAAAAGCCATACC
AATCTTCCAGGATGTAGCTGACAAACGAACTTCCACTTTGGGTGAGAACC
ACGAGGATACTCTGAATACCAGATACTGCTTGGCTCTTTCTTATTTCAAA
CAAAATGATTACCAAAAAGCCATACCAATCTTCCAGGATGTAGCCGATAA
ACGAACTTCCACCATAGGGGAGAACCACGAGGATACTCTGAATACCAGAT
ACTGGTTGGCTCGTTGTTATTACCAACAAAATGATTACCAAAAATCCATA
CCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTTTAGGGGAGAA
CCACAAGGATACTCTGAATACCAGATACTGGTTGGCTTTTTGTCATTACC
AGCAAAATGATTACAAAAAAGCCATACCAATTTTCCAGCATGTAGCCGAC
AAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTCTGAATACCAG
ACACATGTTGGCTTTTTGTTATCACCAACAAAATGATTACCAAAAATCCA
TACCAATTTTCCAGCATGTAGCCAACAAACAGTCTTCCACTTTAGGGAAG
AACCACAAGGATACTCTGAATACCAGATACTGGTTGGCTTTTTGTTATTA
CGAACAAAATGATTACCAAAAAGCCATACCAATTTTCCAGCATGTAGCCG
ACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATACTCTGAATACC
AGATACTGGTTGGCTTTTTGTTATCACCAACAAAATGATTACCAAAAAGC
CATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTTTAGGGA
AGAACCACAAGGATACTCTGAATACCAGACACATGTTGGCTTTTTGTTAT
CACCAACAAAATGATTACCAAAAAGCCATACCAATTTTCCAGGATGTAGC
CGACAAACAAACCTCCACTATAGGGGAGAACCACGAGGATACTCTGAATA
CCAGATACTGGTCGGCTCGTTGTTATTTCAAACAAAATGATTACCAAAAA
GCCATACCAATTTTCCAGGATGTAGCTGAGAAACAAACTTCAACTTTGGG
TGAGAACGACGCAGATACTCTGAATACCAGACACATGTTGGCTCGTTgtt
gttacaaacaaaattaTTACCAAAAAGCCATACCAATTTTCCAGGATGTA
GCTGAGAAACAATCTTCCACTTTGGGTGAGAACGATAAGAATACTCTGAA
TACCAGATACTGGTTAGCTGGTTGTTATTTCAAACAAAATGATTACCAAA
AAGCCATACTTATACTAGAAGACGTCTTTAGAAGACAAACCTCAACGTTA
GGAGGAAACCACAACCAAACTGTTCGAAGCAAGGGACTTTTAAATACTTG
CAACGAATTGATTAATTAGTAAAATAACAATACAttttgacttaatattt
ttagttttatagttctatagttttattgtctttttttgaattatAGTCGA
ACGTGCACAGCGCCCTGTGTTTAACTCGAGCAAAAGTTctagccaaatcc
gaccttttttgaaggcTTCAGGCTCCCCAAAGAATTTTTGATATGCAggc
agacattctcagatttcTAGCCCGAGCTAAAgggaaaaaattgaagatga
gaacataatttttatttacttttaatcATACATTCCGTCATCATTTTTGT
GGTAAAATTTCAGCATTGCTTATATTCATGTaagcttgcatccgtttttg
gTTTGG Coding sequence (CDS) from alignment at sc0000115_pilon:277564..282369+ >MSTRG.14039.3.p1 ID=MSTRG.14039.3.p1|Name=MSTRG.14039.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5862bp|location=Sequence derived from alignment at sc0000115_pilon:277564..282369+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGCCGCTTCTACATCATCTGAAAAACTCAATTCTTGTGTAAAAAC
AGATGTATTTTTATCCCACGATTGGGGTGAAGATGGTATAACTAATCACA
AAAAGGTCGAGAAAATCAACGAGGCGATCAAAGGATTGGGATATGTGACT
TGGTTCGACAATGAACGAATGGTTGGTAACGTACGAGAACAGATGGCAAA
CGGAATCCTAAACACCAAATGTTTTATTGCTTTCATTACAAAGCATTATC
ATAACAAAGTGGTCTTCGGTCTTGATAAAGATAATTGTCGagctgaattt
aattttgccAGCATGAAAGTCCCAATGGTTGCTGTACTTCTTGATCCATC
GATGAAAAACCCTCATGATTGGAAAGGGAATCTAGGATTCACACTCGCAA
CACAATTATATATTGATTTGTCTGGTGATATCAATGATGAAAAGTATTTG
ACGAATCAACTCAAACTTCTGAAAAAAGATTTGACGTCCAAAGGAATCTT
CCCAAATAAATTAGAAGAGACAGCGAATGAATTGAAAGTTTTAGATATTC
GATGGGAAGGCGATCCTTTGGTGAAGAACGCTGTTGAAAATCAAGAAACA
ATACAGGATGAAAGCATTGAGAAATTGAAGGGGAAAGTAAATAATCTACG
GAGAAATGGGGAGTGGGCCGAAGCTATTCCTCTTTATGAAGATATTATTA
AGAAACAATCTTCCACTTTCGGTGAGAACCACAAGGATACTCTGGATACC
AGATACTGGTTGGCTCTTTGTCATTGCCAGCAAAATGATTACCAAAAAGC
CATACCAATTTTCCAGGATGTAGCCGACAAACAATCTTCCACTTCAGGTG
AAAACGACAAGAATACTCTGAATACCAGATACTGCTTGGCTCTATGTTAT
TACGAACAAAATGATTACCAAAAAGCCATACCAATCTTCCAGGATGTAGC
TGACAAACGAACTTCCACTTTGGGTGAGAACCACGAGGATACTCTGAATA
CCAGATACTGCTTGGCTCTTTGTTATTACGAACAAAATGATTACCAAAAA
GCCATACCAATTTTCCAGGATGTAGCTGACAAACGAACTTCCACTTTAGG
TGAAAATGAAGCAGATACTCTGGATACCAGATACTGGTTGGCTCTTCGTC
ATTACCAGCAAAATGATTACAAAAAAGCCATACCAATTTTCCAGGATGTA
GCCGAGAAACAATCTTCCACTTTAGGTGAGAACCACGAGGATACTCTGAA
TACCAGATACTGGTTGGCTTTTTGTTATCACCAACAAAATGATTACCAAA
AAGCCATACCAATCTTCCAGGATGTAGCTGACAAACGAACTTCCACTTTA
GGTGAAAATGAAGCAGATACTCTGGATACCAGATACTGGTTGGCTCTTTG
TCATTACCAGCAAAATGATTACAAAAAAGCCATACCAATTTTCCAGGATG
TAGCCGAGAAACAATCTTCCACTTTAGGTGAGAACCACGAGGATACTCTG
AATACCAGATACTGGTTGGCTTTTTGTTATCACCAACAAAATGATTACCA
AAAAGCCATACCAATCTTCCAGGATGTAGCTGACAAACGAACTTCCACTT
TGGGTGAGAACCACGAGGATACTCTGAATACCAGATACTGCTTGGCTCTT
TCTTATTTCAAACAAAATGATTACCAAAAAGCCATACCAATCTTCCAGGA
TGTAGCCGATAAACGAACTTCCACCATAGGGGAGAACCACGAGGATACTC
TGAATACCAGATACTGGTTGGCTCGTTGTTATTACCAACAAAATGATTAC
CAAAAATCCATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTTCCAC
TTTAGGGGAGAACCACAAGGATACTCTGAATACCAGATACTGGTTGGCTT
TTTGTCATTACCAGCAAAATGATTACAAAAAAGCCATACCAATTTTCCAG
CATGTAGCCGACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGATAC
TCTGAATACCAGACACATGTTGGCTTTTTGTTATCACCAACAAAATGATT
ACCAAAAATCCATACCAATTTTCCAGCATGTAGCCAACAAACAGTCTTCC
ACTTTAGGGAAGAACCACAAGGATACTCTGAATACCAGATACTGGTTGGC
TTTTTGTTATTACGAACAAAATGATTACCAAAAAGCCATACCAATTTTCC
AGCATGTAGCCGACAAACAGTCTTCCACTTTAGGGAAGAACCACAAGGAT
ACTCTGAATACCAGATACTGGTTGGCTTTTTGTTATCACCAACAAAATGA
TTACCAAAAAGCCATACCAATTTTCCAGCATGTAGCCGACAAACAGTCTT
CCACTTTAGGGAAGAACCACAAGGATACTCTGAATACCAGACACATGTTG
GCTTTTTGTTATCACCAACAAAATGATTACCAAAAAGCCATACCAATTTT
CCAGGATGTAGCCGACAAACAAACCTCCACTATAGGGGAGAACCACGAGG
ATACTCTGAATACCAGATACTGGTCGGCTCGTTGTTATTTCAAACAAAAT
GATTACCAAAAAGCCATACCAATTTTCCAGGATGTAGCTGAGAAACAAAC
TTCAACTTTGGGTGAGAACGACGCAGATACTCTGAATACCAGACACATGT
TGGCTCGTTgttgttacaaacaaaattaTTACCAAAAAGCCATACCAATT
TTCCAGGATGTAGCTGAGAAACAATCTTCCACTTTGGGTGAGAACGATAA
GAATACTCTGAATACCAGATACTGGTTAGCTGGTTGTTATTTCAAACAAA
ATGATTACCAAAAAGCCATACTTATACTAGAAGACGTCTTTAGAAGACAA
ACCTCAACGTTAGGAGGAAACCACAACCAAACTGTTCGAAGCAAGGGACT
TTTAAATACTTGCAACGAATTGATTAATTAGATGGCTGCCGCTTCTACAT
CATCTGAAAAACTCAATTCTTGTGTAAAAACAGATGTATTTTTATCCCAC
GATTGGGGTGAAGATGGTATAACTAATCACAAAAAGGTCGAGAAAATCAA
CGAGGCGATCAAAGGATTGGGATATGTGACTTGGTTCGACAATGAACGAA
TGGTTGGTAACGTACGAGAACAGATGGCAAACGGAATCCTAAACACCAAA
TGTTTTATTGCTTTCATTACAAAGCATTATCATAACAAAGTGGTCTTCGG
TCTTGATAAAGATAATTGTCGagctgaatttaattttgccAGCATGAAAG
TCCCAATGGTTGCTGTACTTCTTGATCCATCGATGAAAAACCCTCATGAT
TGGAAAGGGAATCTAGGATTCACACTCGCAACACAATTATATATTGATTT
GTCTGGTGATATCAATGATGAAAAGTATTTGACGAATCAACTCAAACTTC
TGAAAAAAGATTTGACGTCCAAAGGAATCTTCCCAAATAAATTAGAAGAG
ACAGCGAATGAATTGAAAGTTTTAGATATTCGATGGGAAGGCGATCCTTT
GGTGAAGAACGCTGTTGAAAATCAAGAAACAATACAGGATGAAAGCATTG
AGAAATTGAAGGGGAAAGTAAATAATCTACGGAGAAATGGGGAGTGGGCC
GAAGCTATTCCTCTTTATGAAGATATTATTAAGAAACAATCTTCCACTTT
CGGTGAGAACCACAAGGATACTCTGGATACCAGATACTGGTTGGCTCTTT
GTCATTGCCAGCAAAATGATTACCAAAAAGCCATACCAATTTTCCAGGAT
GTAGCCGACAAACAATCTTCCACTTCAGGTGAAAACGACAAGAATACTCT
GAATACCAGATACTGCTTGGCTCTATGTTATTACGAACAAAATGATTACC
AAAAAGCCATACCAATCTTCCAGGATGTAGCTGACAAACGAACTTCCACT
TTGGGTGAGAACCACGAGGATACTCTGAATACCAGATACTGCTTGGCTCT
TTGTTATTACGAACAAAATGATTACCAAAAAGCCATACCAATTTTCCAGG
ATGTAGCTGACAAACGAACTTCCACTTTAGGTGAAAATGAAGCAGATACT
CTGGATACCAGATACTGGTTGGCTCTTCGTCATTACCAGCAAAATGATTA
CAAAAAAGCCATACCAATTTTCCAGGATGTAGCCGAGAAACAATCTTCCA
CTTTAGGTGAGAACCACGAGGATACTCTGAATACCAGATACTGGTTGGCT
TTTTGTTATCACCAACAAAATGATTACCAAAAAGCCATACCAATCTTCCA
GGATGTAGCTGACAAACGAACTTCCACTTTAGGTGAAAATGAAGCAGATA
CTCTGGATACCAGATACTGGTTGGCTCTTTGTCATTACCAGCAAAATGAT
TACAAAAAAGCCATACCAATTTTCCAGGATGTAGCCGAGAAACAATCTTC
CACTTTAGGTGAGAACCACGAGGATACTCTGAATACCAGATACTGGTTGG
CTTTTTGTTATCACCAACAAAATGATTACCAAAAAGCCATACCAATCTTC
CAGGATGTAGCTGACAAACGAACTTCCACTTTGGGTGAGAACCACGAGGA
TACTCTGAATACCAGATACTGCTTGGCTCTTTCTTATTTCAAACAAAATG
ATTACCAAAAAGCCATACCAATCTTCCAGGATGTAGCCGATAAACGAACT
TCCACCATAGGGGAGAACCACGAGGATACTCTGAATACCAGATACTGGTT
GGCTCGTTGTTATTACCAACAAAATGATTACCAAAAATCCATACCAATTT
TCCAGCATGTAGCCGACAAACAGTCTTCCACTTTAGGGGAGAACCACAAG
GATACTCTGAATACCAGATACTGGTTGGCTTTTTGTCATTACCAGCAAAA
TGATTACAAAAAAGCCATACCAATTTTCCAGCATGTAGCCGACAAACAGT
CTTCCACTTTAGGGAAGAACCACAAGGATACTCTGAATACCAGACACATG
TTGGCTTTTTGTTATCACCAACAAAATGATTACCAAAAATCCATACCAAT
TTTCCAGCATGTAGCCAACAAACAGTCTTCCACTTTAGGGAAGAACCACA
AGGATACTCTGAATACCAGATACTGGTTGGCTTTTTGTTATTACGAACAA
AATGATTACCAAAAAGCCATACCAATTTTCCAGCATGTAGCCGACAAACA
GTCTTCCACTTTAGGGAAGAACCACAAGGATACTCTGAATACCAGATACT
GGTTGGCTTTTTGTTATCACCAACAAAATGATTACCAAAAAGCCATACCA
ATTTTCCAGCATGTAGCCGACAAACAGTCTTCCACTTTAGGGAAGAACCA
CAAGGATACTCTGAATACCAGACACATGTTGGCTTTTTGTTATCACCAAC
AAAATGATTACCAAAAAGCCATACCAATTTTCCAGGATGTAGCCGACAAA
CAAACCTCCACTATAGGGGAGAACCACGAGGATACTCTGAATACCAGATA
CTGGTCGGCTCGTTGTTATTTCAAACAAAATGATTACCAAAAAGCCATAC
CAATTTTCCAGGATGTAGCTGAGAAACAAACTTCAACTTTGGGTGAGAAC
GACGCAGATACTCTGAATACCAGACACATGTTGGCTCGTTgttgttacaa
acaaaattaTTACCAAAAAGCCATACCAATTTTCCAGGATGTAGCTGAGA
AACAATCTTCCACTTTGGGTGAGAACGATAAGAATACTCTGAATACCAGA
TACTGGTTAGCTGGTTGTTATTTCAAACAAAATGATTACCAAAAAGCCAT
ACTTATACTAGAAGACGTCTTTAGAAGACAAACCTCAACGTTAGGAGGAA
ACCACAACCAAACTGTTCGAAGCAAGGGACTTTTAAATACTTGCAACGAA
TTGATTAATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000115_pilon | genome | sc0000115_pilon:277564..282369 + |
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