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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000097_pilon:727812..731278+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12725.1.p1 ID=MSTRG.12725.1.p1|Name=MSTRG.12725.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3467bp|location=Sequence derived from alignment at sc0000097_pilon:727812..731278+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTCAACATTTATTACCTCCATAATTTGATGCGCAGCCTAGCAGTGAATA
CATGTTTTTATGGTGAATTTGTCTTTGTCATCAAAATTATTGCAATGGAG
TAGCGTCATCAAACAGTCAAAGTGAAAAAAGTAGACCAAAGAACCAGAAA
ATAAAGTATAAAACATCTTGAATTTTACAAACATTTTGTACCGCAACCAT
TGATAGAAGACTTGATAAACATTGTTAACTCATCAAAGATTCGATATGTT
GAAAGAAGTTCAATCTGGAGTGCAATTCGTAACTGATTTTCTTTCAAGAA
ATGACATCATACCCCAACCGAAAATCGATCAATTTTCAACGATTTTAGAG
AAACTTTTGTTTAATAAATATAACAACCACTGGTTTCCTAAGAAACCCCT
TCAAGGCTCTGGTTTTAGATGTATACGTATTACTCAAACTATAATGGATC
CTGAAATTGAAAAGGCTGCTAGACTGAGTGGGGTTTCAGCTTTTGATCTG
ACCAATACTCTTCCCAAGGAATTTACAATGTGGATTGATCCTGAAGATGT
ATCTTACAGGATAGGAGAAGACGGTTCAATATGTACCTTAGAAAGTGATT
TGAAAGTGCAGTCTTCACCAAGTCTAATCCGTAGATGTCAAACAGAAGTA
AATAAGAAAGATTTAATTGACCCTCCAGCATTTCAACAATGCTTGAGTTA
GTTGCAGTAATtcaatttatatatatatatgatatgttaattttttattt
tttattttagctgAATTTTCTCAGATATATAGGTGCACAATTTTTAGGAA
GGCAATCTGTTTTCTTGTTCCAGCTGATTTCTTGCTTGATCTACCATGAA
TTTAATATAAAAAACTGCACCCCAAGGAAATTACGGATCAaaaatctaga
ggaaaaaacttttagattatatttgaaaagttttgcaaaCTTTCTTTATG
GAGTTTGAAAGCCATCCCCATCTGCAGAGGcaatttttgacattcaaaaa
aggGATGCTTATGCAAAGCTAATACCAATCTATCTTAGAAATAGACCTTT
GCCAGTTAGGATGTCACgttgaagaataaaaaactctatcattaaaacaa
tgacacatATATAATTTGTTTAAGTGTGCATAAATTTTTTCCTATCATCA
TTTTGATGCTGGAGTAACATAACATCCTAACTAGCAAAAGATCTATCCAT
GAATGCAAACCAAATTCTTATCATTTGTGGTTACAAACCCATAGAAGAAT
CTGTTGTGGAATACAATGCCAGACGGTGTCCatcgaacaacttcaaacaa
aaatcgcaatcaaaccaatcaaacgggatcgaataattgcgatttgattg
tcaaacgtaatcgaatctcaatcgaatggccgattcctgggtaatattcg
attgtgttcgattgcgttcgagtaaggttagattggttcgattgatagct
GACTATGTTCATTTGGTtcaattgattgtcaattacattcgattaatctt
cgatttcatTCAATTatgattatgttcgatgagtttgattgcgttcgatg
agtttgattgaaattaaattaatttgGATCACTCCGTTAGAGCTATTACG
CGTGGGTGGCCGAGCGCTTAAGTGCCGTACGAAAGCGAATAagatctaat
acaattgaatcaatcaaacataatcgaatacaatccaacataatcgaagc
aatcgaacggcaaatcctgagTAATATTCGAttacgattcgattgcgttt
gacaatcgaatagaccttttttcaaagaggccaccctgttgaataattat
gtagtccagcagaaaaacaatgataaaaccacgcataattattacaatat
gcatgatacagtaattatacaTGGCTCTATTAttctttttatggctggac
tacataattattcaacaggacgtcctctttgaaaaaaggtctattgcaat
tattcgattgtgttcaattgcgttcaattgattcatcGTTCGATTCGTTC
AATTGACACCATCTGGACAATGACAtgtgattggttgaaaagtagataat
ttgattttagcaaaaattacTGATACCATTTGATAGACCATAAAATTCCA
AGCAAAAAGTATACTACTACAAGTCTTTTACCCAAACGCACAAAAAGATA
ATGGCCATTTAAAGTTGAAATTCTGTTATGTCAGTCCAACTCACATCATT
TTCAACTTCTAAGGCCTGTATTTCTTGATATGTTTAAATACAAGACTTGT
TGAATACACTTTTTTCTCAGAATTTTTTCATGATCTATCTGATGGTATTA
ACCatttttgtttaattcaacttttagaaaattgtcaattttttgccgtt
ttttggggttagagttttgCCTAAAACGCCAATTTTGTTGGTCATAAAAA
GGTTCGCCACACAAAATTAGTGGGCCCTTTCAAAAAGTATCAAAGTCCTG
TTTACTTTCAAACCAATCACATGTAGTTGCATCCCACAAAAGATGCCATA
GATCTGCATGGATCATACCATACCAGCAATTATTTAATAAATTGAGtcaa
tgtagaaaaaaaaatttctggtcTTCAAAACAGATTTAACTTTACCTTAC
TGTTTTCGCTGTTTATCAGTGAGGTAAagtaatttcaaagaaaaatttca
tttttcaactcaTCGTAATTTTTGTACTTTCCTCTGTTGGTGGATGGTAA
GTGGTAAGGTATTCACTTAATTACAGTATATATAGTCTAAATGGAAGAAA
CTTACAGTACTTAGGGCTATCTTTCCAAAAGAATGTTCAACATTCAAATA
GCTTCCGAGCACTGATTAGTTGATTTGGCTCAATTATATCATAATTTCCT
GATATGACCATTCAGGTAGATTTGAATGTTGAGCAAGCCATGAGCACAGT
AAGTGTTCTTGtttttcctcctaatttcaacgcatttttctgacatttag
aaaaaaggttttttatatttttttgatatttcctATTTCATGGTAGATGC
TTTCAAGATACCAAGAgtcaaacatttttgaagagTTTTATTGCAAAGAA
TTTGATCAGCACTTTCTAATTGTTCTGTCTTATATGATTATGTTCAGGTT
CCAGAtcattttggaaaattctttgGGAGATGTTCTTGATAGTAAGGTCT
TTATTATTATCTACCACAAAGTATAATTTTCTTGTTGCAACGATCATGTA
AAtaaatttagaatatttttaactAGTGTAAAGTGTGAATTTAGATTTAT
GCCTAATGTTGTTACATTTTATAATATAGCATATTGTATATATACAACAT
TGAATTTTTATATGCATCATAATAATTGCTTTAGTTCATGGAACTGCTTG
AAGGATATAAAtgcatttcatttttattttgttttaaactaGGGTgggcg
tcaaatgtcaaagtcagaaaattcgagatgtagtgttttttttcatgaaa
atttaacctattgtgag Coding sequence (CDS) from alignment at sc0000097_pilon:727812..731278+ >MSTRG.12725.1.p1 ID=MSTRG.12725.1.p1|Name=MSTRG.12725.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=456bp|location=Sequence derived from alignment at sc0000097_pilon:727812..731278+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAAAGAAGTTCAATCTGGAGTGCAATTCGTAACTGATTTTCTTTC
AAGAAATGACATCATACCCCAACCGAAAATCGATCAATTTTCAACGATTT
TAGAGAAACTTTTGTTTAATAAATATAACAACCACTGGTTTCCTAAGAAA
CCCCTTCAAGGCTCTGGTTTTAGATGTATACGTATTACTCAAACTATAAT
GGATCCTGAAATTGAAAAGGCTGCTAGACTGAGTGGGGTTTCAGCTTTTG
ATCTGACCAATACTCTTCCCAAGGAATTTACAATGTGGATTGATCCTGAA
GATGTATCTTACAGGATAGGAGAAGACGGTTCAATATGTACCTTAGAAAG
TGATTTGAAAGTGCAGTCTTCACCAAGTCTAATCCGTAGATGTCAAACAG
AAGTAAATAAGAAAGATTTAATTGACCCTCCAGCATTTCAACAATGCTTG
AGTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000097_pilon | genome | sc0000097_pilon:727812..731278 + |
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