|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3213368..3215896+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.162.2.p1 ID=MSTRG.162.2.p1|Name=MSTRG.162.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2529bp|location=Sequence derived from alignment at sc0000001_pilon:3213368..3215896+ (Clytia hemisphaerica_ch_hm2_pilon)
TATGTAGTGGtgacatttttaaaacacaCATGAAGATATATCATAAGAAA
AGTTTCTCTGatttgaaaattgcaaaattgatTGAAAGCCAATGGAACGG
GTGGACGAATATTAAATCCAAAGATATTTGGTTTGGTCCGTATAATAATA
AAACGACAGAAAATTCTGAATCATGGGACAACTACAATCTTCAATCCGAT
TATCCAtcccttaaatgtcaatatgaaaagaCGATGAAAGTTTTCACATC
AAACGTAAACGAATCTTTATACACCGAAAACGATTCCTTTCCTAGAATCG
ACAAATTATTCGAATCTGCTGATAGCCTTCCATATCTTTCGTCGAAATCA
CCAAATTTAAAGAACTTTGAAATATGTAATGAACCTGTCAAGAGCACCTT
GTCATTAGATCAACTACCAAAGTCGGAATTCAGTAAATCTGATTCTCCCG
TTCGGATTAAAATGGAAAAAGACATCACTGTTACACCCGTAGAAAGTCAC
CCTCTTTGTCGCATCGAACAGGCTAACAAAGCATTGACACCAGCGGAAAT
TCTTGCAATtgtcaaaaatcaaacaaagattTCTCAAGTAAAGTATAAAG
CGTGCTCCGTACAAGATGAAGCGAAAGTTGCACTGGTAGAGATCCCTAAG
AAATTAACCAGAGAGGAAGGACAGAATACTCCAATAGTGGACTCTGTACA
TCATCAATCGAGTATCCTTCGTTCTTCTGACGAGGAGAAAATTCTTATAA
CACCGTCAACTAAAGAAGGAAAAGGTGTCCTTAACATTGTCAACAGTATT
GATTACACGAACTTGTCAGAAGATGCCGACTGTGGGTCTTCAGAGAGCCG
AAAGTCTGCTCGTTTAGAAGTGGATTATAATAATCGTTTTCAATGCGCAA
ATGAAACTCAGAATATGTTTATGGAAAACTCGTTTAGTGTAAGAATGAAT
CCTTCCTCGAGTCTGCTGATACCAAAACGAAAGCTTTTTCAAGACTCGAT
ACAGTCGGACGTCGACAATATACAACCGAGATGTCAAAAGGAAAGCCAAT
TACATTCGAAGGTTGTTAAGGTACAACAAATCTTTTTGTGTTTCCATTTG
ACCTTTATGCCTTATAAACGCCATCccttgtatcccgctgcatacggttt
gtttacaaatttcgtcagtacttttatgccctttaattttagaaaaaata
tgtaGCTATCAAAactgatcaaaagaaaaattccctctttgctctaaata
gcctgattttaatTTATTATCTCCCTTACATGTTCAGCTGTACATTTCCC
ATCATCCAggaaattacccccccccctagtttattaaagattttttcatt
cttttgttttaggaCTTCGTAACAGATGTTGAAAACGTTGCCACAATGAC
CAAAATATTCATCAGGTAAAATATAACGATGTTTTATagtgaatttttct
aaaatgtaatctccataatttaaaaaataatcctaACTTCTCGTGCTGAT
TTTCTGCCAGGGCCATTTTCTGGAAAGGTAATGTAAACTGTAGAATGTAC
ATTTGACTTGAGGTAATTGTGAAATTTAATTGCTTGTAGAATTTTTAGAT
TAGGTAAGATGTTTAGATTTCTAACTACTTTTatctaggctgctggcatc
cattAACGGATTTGTgctcctatactacctggggttttgtagaggtctga
aATTCAGACTAAACTACTTCGTGTTCTTCGTTGAGGTCATCGAACTTAAT
ATAAACACCCTGgaagtttttgaaagttgtaCTTTATAAATGTAATtagt
taaggcttggggacacgagaagtctttttcgcgttggtgcaatgcaacat
gctccttcccaccaacacaagaaaaaaatgcttgtctcatggtttcttat
tttatttcatgggacaaaaagtgagggaaatacccaaaagacacgctgat
tttgtccaacaaaagtgagatttcacttttattggtagaaagaaaaatgg
ggtggagacacgagaaagtgttttaggttggtgggatggagcatgttgca
atgcaccaacgcgaaaaaaacttctcgtgccCCCAAGCCTTAAGTCAACC
AATCCATcacgtttttcattttcagtaaagCACCCGAGTTGGAGAGCAAA
TTGACATCAATCTGTAAAGAAGTGTTGAAAGAAATGTCCCAACCTTTAAA
ACAGAATTTAGCTTCGAACTATCAGAACAAGCGGGGTTTGTAACTACCAT
TATCTGTGATGTGCTATTAttgtcgtgttttatgtcgtgtttttgtgttt
gttgtttttttgataaaatcttcatATCGTGTTTTCGAAGGTATTTTACG
CATTGTAAAGCCTTGCGTTCTGCGACATTTAGCTTGATACAGATTTAGAT
GTCGGACTACCCAAGACTACCTATACTTTCCGTATTCTAGTACACATTtc
tttatgagaacaaactatataataacACAAGTcttccatggccaaaatat
taagaacaagtctagaaaattttaaggcc Coding sequence (CDS) from alignment at sc0000001_pilon:3213368..3215896+ >MSTRG.162.2.p1 ID=MSTRG.162.2.p1|Name=MSTRG.162.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3474bp|location=Sequence derived from alignment at sc0000001_pilon:3213368..3215896+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTAGTGGtgacatttttaaaacacaCATGAAGATATATCATAAGAAAAG
TTTCTCTGatttgaaaattgcaaaattgatTGAAAGCCAATGGAACGGGT
GGACGAATATTAAATCCAAAGATATTTGGTTTGGTCCGTATAATAATAAA
ACGACAGAAAATTCTGAATCATGGGACAACTACAATCTTCAATCCGATTA
TCCAtcccttaaatgtcaatatgaaaagaCGATGAAAGTTTTCACATCAA
ACGTAAACGAATCTTTATACACCGAAAACGATTCCTTTCCTAGAATCGAC
AAATTATTCGAATCTGCTGATAGCCTTCCATATCTTTCGTCGAAATCACC
AAATTTAAAGAACTTTGAAATATGTAATGAACCTGTCAAGAGCACCTTGT
CATTAGATCAACTACCAAAGTCGGAATTCAGTAAATCTGATTCTCCCGTT
CGGATTAAAATGGAAAAAGACATCACTGTTACACCCGTAGAAAGTCACCC
TCTTTGTCGCATCGAACAGGCTAACAAAGCATTGACACCAGCGGAAATTC
TTGCAATtgtcaaaaatcaaacaaagattTCTCAAGTAAAGTATAAAGCG
TGCTCCGTACAAGATGAAGCGAAAGTTGCACTGGTAGAGATCCCTAAGAA
ATTAACCAGAGAGGAAGGACAGAATACTCCAATAGTGGACTCTGTACATC
ATCAATCGAGTATCCTTCGTTCTTCTGACGAGGAGAAAATTCTTATAACA
CCGTCAACTAAAGAAGGAAAAGGTGTCCTTAACATTGTCAACAGTATTGA
TTACACGAACTTGTCAGAAGATGCCGACTGTGGGTCTTCAGAGAGCCGAA
AGTCTGCTCGTTTAGAAGTGGATTATAATAATCGTTTTCAATGCGCAAAT
GAAACTCAGAATATGTTTATGGAAAACTCGTTTAGTGTAAGAATGAATCC
TTCCTCGAGTCTGCTGATACCAAAACGAAAGCTTTTTCAAGACTCGATAC
AGTCGGACGTCGACAATATACAACCGAGATGTCAAAAGGAAAGCCAATTA
CATTCGAAGGTTGTTAAGgaCTTCGTAACAGATGTTGAAAACGTTGCCAC
AATGACCAAAATATTCATCAGCACCCGAGTTGGAGAGCAAATTGACATCA
ATCTGTAATGTAGTGGtgacatttttaaaacacaCATGAAGATATATCAT
AAGAAAAGTTTCTCTGatttgaaaattgcaaaattgatTGAAAGCCAATG
GAACGGGTGGACGAATATTAAATCCAAAGATATTTGGTTTGGTCCGTATA
ATAATAAAACGACAGAAAATTCTGAATCATGGGACAACTACAATCTTCAA
TCCGATTATCCAtcccttaaatgtcaatatgaaaagaCGATGAAAGTTTT
CACATCAAACGTAAACGAATCTTTATACACCGAAAACGATTCCTTTCCTA
GAATCGACAAATTATTCGAATCTGCTGATAGCCTTCCATATCTTTCGTCG
AAATCACCAAATTTAAAGAACTTTGAAATATGTAATGAACCTGTCAAGAG
CACCTTGTCATTAGATCAACTACCAAAGTCGGAATTCAGTAAATCTGATT
CTCCCGTTCGGATTAAAATGGAAAAAGACATCACTGTTACACCCGTAGAA
AGTCACCCTCTTTGTCGCATCGAACAGGCTAACAAAGCATTGACACCAGC
GGAAATTCTTGCAATtgtcaaaaatcaaacaaagattTCTCAAGTAAAGT
ATAAAGCGTGCTCCGTACAAGATGAAGCGAAAGTTGCACTGGTAGAGATC
CCTAAGAAATTAACCAGAGAGGAAGGACAGAATACTCCAATAGTGGACTC
TGTACATCATCAATCGAGTATCCTTCGTTCTTCTGACGAGGAGAAAATTC
TTATAACACCGTCAACTAAAGAAGGAAAAGGTGTCCTTAACATTGTCAAC
AGTATTGATTACACGAACTTGTCAGAAGATGCCGACTGTGGGTCTTCAGA
GAGCCGAAAGTCTGCTCGTTTAGAAGTGGATTATAATAATCGTTTTCAAT
GCGCAAATGAAACTCAGAATATGTTTATGGAAAACTCGTTTAGTGTAAGA
ATGAATCCTTCCTCGAGTCTGCTGATACCAAAACGAAAGCTTTTTCAAGA
CTCGATACAGTCGGACGTCGACAATATACAACCGAGATGTCAAAAGGAAA
GCCAATTACATTCGAAGGTTGTTAAGgaCTTCGTAACAGATGTTGAAAAC
GTTGCCACAATGACCAAAATATTCATCAGCACCCGAGTTGGAGAGCAAAT
TGACATCAATCTGTAATGTAGTGGtgacatttttaaaacacaCATGAAGA
TATATCATAAGAAAAGTTTCTCTGatttgaaaattgcaaaattgatTGAA
AGCCAATGGAACGGGTGGACGAATATTAAATCCAAAGATATTTGGTTTGG
TCCGTATAATAATAAAACGACAGAAAATTCTGAATCATGGGACAACTACA
ATCTTCAATCCGATTATCCAtcccttaaatgtcaatatgaaaagaCGATG
AAAGTTTTCACATCAAACGTAAACGAATCTTTATACACCGAAAACGATTC
CTTTCCTAGAATCGACAAATTATTCGAATCTGCTGATAGCCTTCCATATC
TTTCGTCGAAATCACCAAATTTAAAGAACTTTGAAATATGTAATGAACCT
GTCAAGAGCACCTTGTCATTAGATCAACTACCAAAGTCGGAATTCAGTAA
ATCTGATTCTCCCGTTCGGATTAAAATGGAAAAAGACATCACTGTTACAC
CCGTAGAAAGTCACCCTCTTTGTCGCATCGAACAGGCTAACAAAGCATTG
ACACCAGCGGAAATTCTTGCAATtgtcaaaaatcaaacaaagattTCTCA
AGTAAAGTATAAAGCGTGCTCCGTACAAGATGAAGCGAAAGTTGCACTGG
TAGAGATCCCTAAGAAATTAACCAGAGAGGAAGGACAGAATACTCCAATA
GTGGACTCTGTACATCATCAATCGAGTATCCTTCGTTCTTCTGACGAGGA
GAAAATTCTTATAACACCGTCAACTAAAGAAGGAAAAGGTGTCCTTAACA
TTGTCAACAGTATTGATTACACGAACTTGTCAGAAGATGCCGACTGTGGG
TCTTCAGAGAGCCGAAAGTCTGCTCGTTTAGAAGTGGATTATAATAATCG
TTTTCAATGCGCAAATGAAACTCAGAATATGTTTATGGAAAACTCGTTTA
GTGTAAGAATGAATCCTTCCTCGAGTCTGCTGATACCAAAACGAAAGCTT
TTTCAAGACTCGATACAGTCGGACGTCGACAATATACAACCGAGATGTCA
AAAGGAAAGCCAATTACATTCGAAGGTTGTTAAGgaCTTCGTAACAGATG
TTGAAAACGTTGCCACAATGACCAAAATATTCATCAGCACCCGAGTTGGA
GAGCAAATTGACATCAATCTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3213368..3215896 + |
|
