MSTRG.14979.1.p1 (mRNA) -

Overview
NameMSTRG.14979.1.p1
Unique NameMSTRG.14979.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000128_pilon:964432..965884+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14979.1.p1 ID=MSTRG.14979.1.p1|Name=MSTRG.14979.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1453bp|location=Sequence derived from alignment at sc0000128_pilon:964432..965884+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGATTCTTGGAAAGCCGAGAGCTGAAAGTTGATTACTCACAGTATACCA
CAGAGCTATgtaataaatgaataaaatacgaagtattagaaaatagaaaa
gaatcATAAAATGTAGGTACAATTTGGTCGAATCCAACACTCGACCAATA
CCTTCATACACTTCACTACATACGAGATTAGAACAAGCGAAAACGAGTGA
AAAATGTTAAGACTTTTCTTGAGTCTGATTATTATTTCACTTTTTATCAG
CTACGGACAAGTTATATTAAAAGGAAAAGTGTCAGCGCATTCCATACaaa
atgaaccaatcaaaaaAGACACCCAAGCAATCGTTCAAGGAGCCGAAAAG
ACATCGAAAAGAATCGAAAAACCAAAACCGTTGGAAATGAACCAGGATCA
AGATTCAGAAGAAAATGATAACCAAGATGCCGATGACGAGGAAATTGCAC
CAAGAGCGAAGCGTTACGATCCTGATAGTGATGTTCGATACCGATACAAC
ACCAATCGTGACAGCGATAACAACAACGATGGTGGTACAACCTACATTTA
TGGATATGCAGGTGGTTCAGGCGTAGGAATAATTGTCTTTTTAGCCATAC
TTTATTGGTGTTGTTGCAGACCTAACTAAAACTAAATGACGGAACAGTAG
AACCTAAAGCAGAGTTATCTGTGTATAATTTATCATCTCTGCAAAgttaa
agaagaagaaagatcaCGTGATCTGAGATTGGAACCCTCAGATTGGAACA
TAACTACGTAAAGCTTATAACTAATATTTTGTATACCtgttaattttcaa
taattttcgaattaaagaaaaactACAATCTGTGACataatacttggcac
aaaagggaaattccccatgaaatttcaaaaccacaaacgatttttaagtg
ctctaaaaaagtaggttggaagggtagagttttaactctgagttttaacg
ctagaatgaaaaccttaggatctgaggatccaaaagttcaaaaaaggtcc
gatagggcttgaaatatagcctggaaaccgataaatccctcccaaatcga
aatattcgatgacatgaagttgaaggcccgaaattgacattcttgcTCGc
acttcaattttcaaaaaacggtaaaataaccaaaattgccaatatgttat
ggcactgattgtagtaaTTAGGAGTTAACTACCTTGTAAATCCATAATGA
TAGATTAAAAGTCAtaattaaaggcaaaaagcatTAGATTAAAGTGATAT
TATATATTAGGCTCTAAACTTATCAGGCCGGGCGGGTTTGACTTAAGCAG
GGTTAAGTTTTCATGTGTTAACTATACAGTgtcgtagcaactgggggggg
ggggggcaaggggggctatgccccccaatatttttttcaaaaatggttac
tTTGCAAAATgctaagtttttctttttttttctcgaaagcaTTTTggttt
act

Coding sequence (CDS) from alignment at sc0000128_pilon:964432..965884+

>MSTRG.14979.1.p1 ID=MSTRG.14979.1.p1|Name=MSTRG.14979.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=426bp|location=Sequence derived from alignment at sc0000128_pilon:964432..965884+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAAGACTTTTCTTGAGTCTGATTATTATTTCACTTTTTATCAGCTA
CGGACAAGTTATATTAAAAGGAAAAGTGTCAGCGCATTCCATACaaaatg
aaccaatcaaaaaAGACACCCAAGCAATCGTTCAAGGAGCCGAAAAGACA
TCGAAAAGAATCGAAAAACCAAAACCGTTGGAAATGAACCAGGATCAAGA
TTCAGAAGAAAATGATAACCAAGATGCCGATGACGAGGAAATTGCACCAA
GAGCGAAGCGTTACGATCCTGATAGTGATGTTCGATACCGATACAACACC
AATCGTGACAGCGATAACAACAACGATGGTGGTACAACCTACATTTATGG
ATATGCAGGTGGTTCAGGCGTAGGAATAATTGTCTTTTTAGCCATACTTT
ATTGGTGTTGTTGCAGACCTAACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14979MSTRG.14979Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14979.1.p1.exon1MSTRG.14979.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14979.1.p1MSTRG.14979.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128_pilongenomesc0000128_pilon:964432..965884 +