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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1376688..1379566+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1529.3.p1 ID=MSTRG.1529.3.p1|Name=MSTRG.1529.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2879bp|location=Sequence derived from alignment at sc0000007_pilon:1376688..1379566+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTAGAAAGGttataaaatgaaagaataagTAAAAATGTCTTGAAAGAAA
TTACCATCACCATAACGACATGTTCAATAACAAGATCCGTCTGCTCATAC
CTAACCATCGCACCATCATCGAAAACAACAAAAGCTTCACggtaaaataa
aattgttttttgtggCTGGCTAATTACAGTGcagtctctttaattcgaac
cttttataactcgaacctctttaaACCGAttgtttccttaactcgaacaa
gttttctgttCCCTTCCGttattaacaatgccttataaaccttactccat
aactcgaacaaatttgtgttccccgtgcgtgtttgagttatggagccTCT
ACTGTAATGTGCTCTGAGCCCCTCCccggttattaatttttgatttcgaC
CCCTGGACCTTTTTAAGACCCCCATTaaagaattttggaaaatatttcca
GCTATCGATAAAaaagccccttattttgctgtaaatagGCAGGTTTCAGT
CTATCATTACCTTATGTCGGAGTATTTTGGAGGTAAATCTTAGAAACCCG
TCAATTAGCACCAGCCCCCTCCCCGACAAAGTTGaaaaaaaGCAATCCGT
AGAgaaacaattttgtaaaatgtcCTTTAATTATGAGACTCTTTCCTGGT
TTAGACTTATCTTAGAGTCTTTTGATATGAAGGAAAAGACCTTATCATCC
GCATTCACCATGTAAAGTTAACCATACTTCTTTAATCGTTTTACTCGACT
TATGTTATCCCTTTAGGTTTACTGCGTGGAAGTTGTTTGCGACGGCAAAG
TAACCAATGTTGAACATCGATACAGCGAGTTCTATGAACTGTACAGAAag
gtaaaacaaaaatttttcaaacatatCTTCCCAAAACATCGCAAGTCtcc
aaacttttaaattttaataaagaTCTAATCTGAAAGTCAAAGTCCTATGG
TTTCTGAAAATACCATATTTCCATTATTTCCCAGTGTACCTAATACTACT
TTTCAAGCTTTCAAAGATGATCGCAGGAAAGATTGTCTTTCCACCCAAAC
GATTATTGAATAATAAAGATGTCAAGTTGATTGAAGCCAGAAGGAAAGGT
CTCCAACAATACTTACAGGTAACTCACAAAAGCCTCGTTGGTCAAGCTGT
TCTCCTAGTTATTGTATTTTGCTAACCCAGAACCCCCTATAAGACTACGA
TACGCACTTATACTTAACAGACTTTAGTTCATCTGGTAGGCGAATGAGgg
agaaaattcgaaaaaacttCCAAACCTCTACTACTCGAATGTCTCAATAA
CTCGAACGGTTTCCTTCCCCTGGGCCTGACTGTATTCGCGGTGATAAACC
ACCTAGTTTAAAATTGTTAATCAAATGATCAATGaataattgaatatttt
tgtttgactTTTGTTTGACTTTGTATCTATCTTCGCAGACGGTTTTGTAC
ACGTTTCAAGACAACGTACCACCTCGTTTGTTGGATTTTCTCGGTATCCC
TGATTATTATGATCAACAATACGATAATAATTTGTGAGTATAACCTTCCT
AACATTTACTGGAAAACCATTTTGGCAACATCGGCCACTCATAAGTAATT
ATTCTGTTGCAAAATAGGCAAAATAAAAACTGAGTAAGAATCAAATTGCA
CCCGTGTAAATCTCATAACATCGGACTCTAAAGCCTAaccttgttttctt
gttttcctTACGTTAACAGCACGACTGACGAGTTGAATTCATCCTTGGAT
GGTGACCAGAAGTAAGAATGTTTGCTGCACCTCATTTTGTGACTGActct
ttctttttgtcattccctacttttaggttccaaataaacgcccccctgct
tgttaatgttttcagctgtcaacgagaaggccccttattttgctctaaat
agcctgattttgacctatatttaccttatttttgggttttcagaagtaca
attttcaacccccccccgaCAATtaggggggcccgtttattaaaatcttg
aaaattttccaccccccctcccccGCCAGTTTATTTGGAACTTTTAAGAG
TACTTGATGCtcgttaaaattattttttttgcctgaacaTCTTTTTATTT
CGTTCTGTATTcgattcattgttttttttcagtggacaTGACAATACATT
TTCTGCAACCCAAAATATGATTTGCTTTCGTAAGGATGCGTTCCTTGTTC
CAACGCTAAAAGGTACAATTCTAGATTTTGTAGATATAaaccagcggccg
aggtagtgaataGTGTCACTTCGTAGGACACCCCTTAGATCATAATTTCA
CACCCTATTAAATTGGCACGGAATTCTTACATTCAAAATCTTCGATACAT
TTGACCAAGATATGTTAGCAATATAGATGACCAGAGTTTCAACGAAGTGT
ATCAAAGAGGAAAAACAGTCTTGAAATCAAACTAAGGCTCCTGAAATTCT
GAAGGacgaaagttttctttttcgcTCAACCATCATCATATCTCAATATC
TTTCTAGTTCGTAATATCAGCTACAAACAACAAATTACTGTTAACATCGT
TTTAAGGCATTTCCAGCCTACAATCTTGCTTAAACCTTTGCTTTAACTTC
TCTTCTTCGCAAAGTTAATAAATAAAAAGCGATTTCAGAGGATATGTTAT
GACCATTTACCTTACATTTTCACCTTTTCAGATTTGGAAGAAGAAAACAC
TCTTCCAGACATTATCAATAAAGGTTGTTTAGAGGGCATCTATGGATAAT
TTGCTGTGCAACCATTCCAAGATAAAATTGTAAATAGATTTTTTGATATA
GtgaaatttgatatttgaatGATTACTTAGTAATAGATTATTATAATTAC
CTGTTTCCATTTTCCGATTTAAATGATTG Coding sequence (CDS) from alignment at sc0000007_pilon:1376688..1379566+ >MSTRG.1529.3.p1 ID=MSTRG.1529.3.p1|Name=MSTRG.1529.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3633bp|location=Sequence derived from alignment at sc0000007_pilon:1376688..1379566+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCAATAACAAGATCCGTCTGCTCATACCTAACCATCGCACCATCAT
CGAAAACAACAAAAGCTTCACgGTTTACTGCGTGGAAGTTGTTTGCGACG
GCAAAGTAACCAATGTTGAACATCGATACAGCGAGTTCTATGAACTGTAC
AGAAagCTTTCAAAGATGATCGCAGGAAAGATTGTCTTTCCACCCAAACG
ATTATTGAATAATAAAGATGTCAAGTTGATTGAAGCCAGAAGGAAAGGTC
TCCAACAATACTTACAGACGGTTTTGTACACGTTTCAAGACAACGTACCA
CCTCGTTTGTTGGATTTTCTCGGTATCCCTGATTATTATGATCAACAATA
CGATAATAATTTCACGACTGACGAGTTGAATTCATCCTTGGATGGTGACC
AGAAtggacaTGACAATACATTTTCTGCAACCCAAAATATGATTTGCTTT
CATTTGGAAGAAGAAAACACTCTTCCAGACATTATCAATAAAGGTTGTTT
AGAGGGCATCTATGGATAAATGTTCAATAACAAGATCCGTCTGCTCATAC
CTAACCATCGCACCATCATCGAAAACAACAAAAGCTTCACgGTTTACTGC
GTGGAAGTTGTTTGCGACGGCAAAGTAACCAATGTTGAACATCGATACAG
CGAGTTCTATGAACTGTACAGAAagCTTTCAAAGATGATCGCAGGAAAGA
TTGTCTTTCCACCCAAACGATTATTGAATAATAAAGATGTCAAGTTGATT
GAAGCCAGAAGGAAAGGTCTCCAACAATACTTACAGACGGTTTTGTACAC
GTTTCAAGACAACGTACCACCTCGTTTGTTGGATTTTCTCGGTATCCCTG
ATTATTATGATCAACAATACGATAATAATTTCACGACTGACGAGTTGAAT
TCATCCTTGGATGGTGACCAGAAtggacaTGACAATACATTTTCTGCAAC
CCAAAATATGATTTGCTTTCATTTGGAAGAAGAAAACACTCTTCCAGACA
TTATCAATAAAGGTTGTTTAGAGGGCATCTATGGATAAATGTTCAATAAC
AAGATCCGTCTGCTCATACCTAACCATCGCACCATCATCGAAAACAACAA
AAGCTTCACgGTTTACTGCGTGGAAGTTGTTTGCGACGGCAAAGTAACCA
ATGTTGAACATCGATACAGCGAGTTCTATGAACTGTACAGAAagCTTTCA
AAGATGATCGCAGGAAAGATTGTCTTTCCACCCAAACGATTATTGAATAA
TAAAGATGTCAAGTTGATTGAAGCCAGAAGGAAAGGTCTCCAACAATACT
TACAGACGGTTTTGTACACGTTTCAAGACAACGTACCACCTCGTTTGTTG
GATTTTCTCGGTATCCCTGATTATTATGATCAACAATACGATAATAATTT
CACGACTGACGAGTTGAATTCATCCTTGGATGGTGACCAGAAtggacaTG
ACAATACATTTTCTGCAACCCAAAATATGATTTGCTTTCATTTGGAAGAA
GAAAACACTCTTCCAGACATTATCAATAAAGGTTGTTTAGAGGGCATCTA
TGGATAAATGTTCAATAACAAGATCCGTCTGCTCATACCTAACCATCGCA
CCATCATCGAAAACAACAAAAGCTTCACgGTTTACTGCGTGGAAGTTGTT
TGCGACGGCAAAGTAACCAATGTTGAACATCGATACAGCGAGTTCTATGA
ACTGTACAGAAagCTTTCAAAGATGATCGCAGGAAAGATTGTCTTTCCAC
CCAAACGATTATTGAATAATAAAGATGTCAAGTTGATTGAAGCCAGAAGG
AAAGGTCTCCAACAATACTTACAGACGGTTTTGTACACGTTTCAAGACAA
CGTACCACCTCGTTTGTTGGATTTTCTCGGTATCCCTGATTATTATGATC
AACAATACGATAATAATTTCACGACTGACGAGTTGAATTCATCCTTGGAT
GGTGACCAGAAtggacaTGACAATACATTTTCTGCAACCCAAAATATGAT
TTGCTTTCATTTGGAAGAAGAAAACACTCTTCCAGACATTATCAATAAAG
GTTGTTTAGAGGGCATCTATGGATAAATGTTCAATAACAAGATCCGTCTG
CTCATACCTAACCATCGCACCATCATCGAAAACAACAAAAGCTTCACgGT
TTACTGCGTGGAAGTTGTTTGCGACGGCAAAGTAACCAATGTTGAACATC
GATACAGCGAGTTCTATGAACTGTACAGAAagCTTTCAAAGATGATCGCA
GGAAAGATTGTCTTTCCACCCAAACGATTATTGAATAATAAAGATGTCAA
GTTGATTGAAGCCAGAAGGAAAGGTCTCCAACAATACTTACAGACGGTTT
TGTACACGTTTCAAGACAACGTACCACCTCGTTTGTTGGATTTTCTCGGT
ATCCCTGATTATTATGATCAACAATACGATAATAATTTCACGACTGACGA
GTTGAATTCATCCTTGGATGGTGACCAGAAtggacaTGACAATACATTTT
CTGCAACCCAAAATATGATTTGCTTTCATTTGGAAGAAGAAAACACTCTT
CCAGACATTATCAATAAAGGTTGTTTAGAGGGCATCTATGGATAAATGTT
CAATAACAAGATCCGTCTGCTCATACCTAACCATCGCACCATCATCGAAA
ACAACAAAAGCTTCACgGTTTACTGCGTGGAAGTTGTTTGCGACGGCAAA
GTAACCAATGTTGAACATCGATACAGCGAGTTCTATGAACTGTACAGAAa
gCTTTCAAAGATGATCGCAGGAAAGATTGTCTTTCCACCCAAACGATTAT
TGAATAATAAAGATGTCAAGTTGATTGAAGCCAGAAGGAAAGGTCTCCAA
CAATACTTACAGACGGTTTTGTACACGTTTCAAGACAACGTACCACCTCG
TTTGTTGGATTTTCTCGGTATCCCTGATTATTATGATCAACAATACGATA
ATAATTTCACGACTGACGAGTTGAATTCATCCTTGGATGGTGACCAGAAt
ggacaTGACAATACATTTTCTGCAACCCAAAATATGATTTGCTTTCATTT
GGAAGAAGAAAACACTCTTCCAGACATTATCAATAAAGGTTGTTTAGAGG
GCATCTATGGATAAATGTTCAATAACAAGATCCGTCTGCTCATACCTAAC
CATCGCACCATCATCGAAAACAACAAAAGCTTCACgGTTTACTGCGTGGA
AGTTGTTTGCGACGGCAAAGTAACCAATGTTGAACATCGATACAGCGAGT
TCTATGAACTGTACAGAAagCTTTCAAAGATGATCGCAGGAAAGATTGTC
TTTCCACCCAAACGATTATTGAATAATAAAGATGTCAAGTTGATTGAAGC
CAGAAGGAAAGGTCTCCAACAATACTTACAGACGGTTTTGTACACGTTTC
AAGACAACGTACCACCTCGTTTGTTGGATTTTCTCGGTATCCCTGATTAT
TATGATCAACAATACGATAATAATTTCACGACTGACGAGTTGAATTCATC
CTTGGATGGTGACCAGAAtggacaTGACAATACATTTTCTGCAACCCAAA
ATATGATTTGCTTTCATTTGGAAGAAGAAAACACTCTTCCAGACATTATC
AATAAAGGTTGTTTAGAGGGCATCTATGGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000007_pilon | genome | sc0000007_pilon:1376688..1379566 + |
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