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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011527 ID=TCONS_00011527|Name=TCONS_00011527|organism=Clytia hemisphaerica|type=transcript|length=1118bp
GATGTGTCTCTCATACGTTCGCCTTTTGGTGGCTGTGGAATACGGCTTTG
TATTTGTCCTTGTTTTGGTTGTGATTGTTGGATTTTTGGGAGTCGTGGAA
TTCTAGAGACAGTTTGTTGGATGGATTGTTTTGGTTGAGCTGGTGGTTGA
GGAATCCTTGGCAAGGCTAAGGTTTGAGGAGCTTGGTTTTGTGGAGCAAC
ACAGCTTTGACGAACTTGGCTTTGTGGAGAGACGGTTTGAATCAGATCTC
TCTGTTGAGAGATGGATGGTAAAACTGGAGTTTTATTCAACTCTTGGCGA
ACGTCTTGTTGTTTTGGTGCACCACGTACACGGACTGACGGATCACGTAA
ACGTAAAATATCTTTGTTCAAAAGACTTGGTTTGACGATTCCTTTGATGG
ATGTACGTTTGATGGCAAGTTCGTATTCAGAATGTATGTTTTGTTGCGAT
TCTACAACAATTGGCTGGCGTTTGACGACTCTGCTTTGAACAGGTGGCAA
GATTGTGGCCTTGTTAAATTCGTTACGCCTTGGTTTAGATTTTCCATAAC
CAGTGGACCCAACGTTATTGTAAGATTTGACTTTCtctttgaagatttta
acttTGGATTCAGGAGCAATTCTCTTGGTTGAAACGACGTGAGTTGGGAT
TGGTGGTAATCCCTTTGGAGCGACAGCTTCCGGCATGACAGCTCTTTGTG
GTTTTCGAATCACAGAACGGTTATCATAGTAAGTCTGTTCTTCGTCAAAC
TTGTTTTCATAATCATATTCTTCATGATCTTCTGGTGATTCCAGCTCTGG
AGAAATGACATCTCGATTCAAAACACGTTCCAACGGTGATGAACTGACTG
AAGATTGAGAATCGGGAGAATATCGGTCAAATCTTTCATATGGTGATACC
ATTTTACGATTATCTTGTTCGATTGGTGAGTTAACAACTCGGCCTTTGCG
TCGAGGGGAGCGAACAACTCGTTCTTTCAACTCAGGAGAGTGAATAATTG
GACATTTAGATGCTGGGGAGTGAACGACTCGTCTGTTGTCGTGTCTAGGA
GAATCATCTTCTTGTTCTTGAGATTCAGGGGAGTTAGCAACTCGTTCTAG
AGGTTCAGGAGAGTAGAC Run BLAST on NCBI protein sequence of TCONS_00011527-protein >TCONS_00011527-protein ID=TCONS_00011527-protein|Name=TCONS_00011527-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp
VYSPEPLERVANSPESQEQEDDSPRHDNRRVVHSPASKCPIIHSPELKER
VVRSPRRKGRVVNSPIEQDNRKMVSPYERFDRYSPDSQSSVSSSPLERVL
NRDVISPELESPEDHEEYDYENKFDEEQTYYDNRSVIRKPQRAVMPEAVA
PKGLPPIPTHVVSTKRIAPESKVKIFKEKVKSYNNVGSTGYGKSKPRRNE
FNKATILPPVQSRVVKRQPIVVESQQNIHSEYELAIKRTSIKGIVKPSLL
NKDILRLRDPSVRVRGAPKQQDVRQELNKTPVLPSISQQRDLIQTVSPQS
QVRQSCVAPQNQAPQTLALPRIPQPPAQPKQSIQQTVSRIPRLPKIQQSQ
PKQGQIQSRIPQPPKGERMRDT Run BLAST on NCBI transcript from alignment at sc0000128:481909..483026 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011527 ID=TCONS_00011527|Name=TCONS_00011527|organism=Clytia hemisphaerica|type=transcript|length=1118bp|location=Sequence derived from alignment at sc0000128:481909..483026 (Clytia hemisphaerica)
GTCTACTCTCCTGAACCTCTAGAACGAGTTGCTAACTCCCCTGAATCTCA
AGAACAAGAAGATGATTCTCCTAGACACGACAACAGACGAGTCGTTCACT
CCCCAGCATCTAAATGTCCAATTATTCACTCTCCTGAGTTGAAAGAACGA
GTTGTTCGCTCCCCTCGACGCAAAGGCCGAGTTGTTAACTCACCAATCGA
ACAAGATAATCGTAAAATGGTATCACCATATGAAAGATTTGACCGATATT
CTCCCGATTCTCAATCTTCAGTCAGTTCATCACCGTTGGAACGTGTTTTG
AATCGAGATGTCATTTCTCCAGAGCTGGAATCACCAGAAGATCATGAAGA
ATATGATTATGAAAACAAGTTTGACGAAGAACAGACTTACTATGATAACC
GTTCTGTGATTCGAAAACCACAAAGAGCTGTCATGCCGGAAGCTGTCGCT
CCAAAGGGATTACCACCAATCCCAACTCACGTCGTTTCAACCAAGAGAAT
TGCTCCTGAATCCAaagttaaaatcttcaaagaGAAAGTCAAATCTTACA
ATAACGTTGGGTCCACTGGTTATGGAAAATCTAAACCAAGGCGTAACGAA
TTTAACAAGGCCACAATCTTGCCACCTGTTCAAAGCAGAGTCGTCAAACG
CCAGCCAATTGTTGTAGAATCGCAACAAAACATACATTCTGAATACGAAC
TTGCCATCAAACGTACATCCATCAAAGGAATCGTCAAACCAAGTCTTTTG
AACAAAGATATTTTACGTTTACGTGATCCGTCAGTCCGTGTACGTGGTGC
ACCAAAACAACAAGACGTTCGCCAAGAGTTGAATAAAACTCCAGTTTTAC
CATCCATCTCTCAACAGAGAGATCTGATTCAAACCGTCTCTCCACAAAGC
CAAGTTCGTCAAAGCTGTGTTGCTCCACAAAACCAAGCTCCTCAAACCTT
AGCCTTGCCAAGGATTCCTCAACCACCAGCTCAACCAAAACAATCCATCC
AACAAACTGTCTCTAGAATTCCACGACTCCCAAAAATCCAACAATCACAA
CCAAAACAAGGACAAATACAAAGCCGTATTCCACAGCCACCAAAAGGCGA
ACGTATGAGAGACACATC Coding sequence (CDS) from alignment at sc0000128:481909..483026 >TCONS_00011527 ID=TCONS_00011527|Name=TCONS_00011527|organism=Clytia hemisphaerica|type=CDS|length=1116bp|location=Sequence derived from alignment at sc0000128:481909..483026 (Clytia hemisphaerica)
GTCTACTCTCCTGAACCTCTAGAACGAGTTGCTAACTCCCCTGAATCTCA
AGAACAAGAAGATGATTCTCCTAGACACGACAACAGACGAGTCGTTCACT
CCCCAGCATCTAAATGTCCAATTATTCACTCTCCTGAGTTGAAAGAACGA
GTTGTTCGCTCCCCTCGACGCAAAGGCCGAGTTGTTAACTCACCAATCGA
ACAAGATAATCGTAAAATGGTATCACCATATGAAAGATTTGACCGATATT
CTCCCGATTCTCAATCTTCAGTCAGTTCATCACCGTTGGAACGTGTTTTG
AATCGAGATGTCATTTCTCCAGAGCTGGAATCACCAGAAGATCATGAAGA
ATATGATTATGAAAACAAGTTTGACGAAGAACAGACTTACTATGATAACC
GTTCTGTGATTCGAAAACCACAAAGAGCTGTCATGCCGGAAGCTGTCGCT
CCAAAGGGATTACCACCAATCCCAACTCACGTCGTTTCAACCAAGAGAAT
TGCTCCTGAATCCAaagttaaaatcttcaaagaGAAAGTCAAATCTTACA
ATAACGTTGGGTCCACTGGTTATGGAAAATCTAAACCAAGGCGTAACGAA
TTTAACAAGGCCACAATCTTGCCACCTGTTCAAAGCAGAGTCGTCAAACG
CCAGCCAATTGTTGTAGAATCGCAACAAAACATACATTCTGAATACGAAC
TTGCCATCAAACGTACATCCATCAAAGGAATCGTCAAACCAAGTCTTTTG
AACAAAGATATTTTACGTTTACGTGATCCGTCAGTCCGTGTACGTGGTGC
ACCAAAACAACAAGACGTTCGCCAAGAGTTGAATAAAACTCCAGTTTTAC
CATCCATCTCTCAACAGAGAGATCTGATTCAAACCGTCTCTCCACAAAGC
CAAGTTCGTCAAAGCTGTGTTGCTCCACAAAACCAAGCTCCTCAAACCTT
AGCCTTGCCAAGGATTCCTCAACCACCAGCTCAACCAAAACAATCCATCC
AACAAACTGTCTCTAGAATTCCACGACTCCCAAAAATCCAACAATCACAA
CCAAAACAAGGACAAATACAAAGCCGTATTCCACAGCCACCAAAAGGCGA
ACGTATGAGAGACACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011527-exon-sc0000128-1491911889:481909..483026 | TCONS_00011527-exon-sc0000128-1491911889:481909..483026 | Clytia hemisphaerica | exon |
| TCONS_00011527-exon-sc0000128-1510915933:481909..483026 | TCONS_00011527-exon-sc0000128-1510915933:481909..483026 | Clytia hemisphaerica | exon |
| TCONS_00011527-exon-sc0000128-1575043694:481909..483026 | TCONS_00011527-exon-sc0000128-1575043694:481909..483026 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000128 | supercontig | sc0000128:481909..483026 . |
Blast
The following BLAST results are available for this feature:
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