MSTRG.12817.4.p1 (mRNA) -

Overview
NameMSTRG.12817.4.p1
Unique NameMSTRG.12817.4.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000098_pilon:1073007..1073912-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12817.4.p1 ID=MSTRG.12817.4.p1|Name=MSTRG.12817.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=906bp|location=Sequence derived from alignment at sc0000098_pilon:1073007..1073912- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGAATCGCCCTTTTGCACACGGCAACATTGGTTGCGTGTTTTCTATAA
AAAGTGGCATTAGAAGTAATATTTACACTGCTAGATTTAACCAGTGTAAT
TCATTTATAATCAAGTGAATAAAAAAGAAAATGGCGGCAGAAGATTCGAA
CCGATTATTGAGCAATGGTGAAAATGAAAAAGAACTCAGTGAAGTGAATG
GAATTGAGGCAAAAGTGATGGGTACCGAAAAAGATGAATTATTCGCAAAA
ATCGAGGAGGACTCTGGGACTGGATTGAAACGACAAGTCAATTTGTTGGG
CGGTATTTGTCTACTGGTTGGAACGATTATCGGATCAGGTATATCCCGAA
ATCAAAACCCTTTTCCCCTTTTTTTCAAAATCGATTTTCTTTTTTTACTG
AATTTACTTGAAAATGTCCCCAGTGTACTTGTTTCTTTTTTATTCCATCG
CATTAACTCCTTTCTGCGGCCACCTTTCGATAAAAACCACCCTCTCTTCC
GCCCGTCCAATTAGGTATCTTTGCATCACCGACAACCATTGCTGAACGTG
TACAAAGCCCTGGAGCCACTCTTCTTGTATGGACTGGATGTGGATTAATC
GCTATGTTTGGTGCATTATGTTACGTTGAGCTTGGAACAATGTACCCAAA
CGAATCTGGTGGTGAATACATCTACATTCAAAAAGCGTTCGGTGATTTGC
CAGCTTTCTTGTTAGCTTTCACCAGTGTTTCCATCATCAAGCCCTCCTCA
ATGGCACTGATCGCTCTTACTTGTGGTGATTACCTGATGGTGGCCATATC
TAATCTAAATCCCCACCAAATTTTACAAAATTGATCAATCGCCAAATTAA
ATCCTCGCCAAAAATCGCATTTTGGCCAATCGCCAAATTAAATCCACGCC
AAAATT

Coding sequence (CDS) from alignment at sc0000098_pilon:1073007..1073912-

>MSTRG.12817.4.p1 ID=MSTRG.12817.4.p1|Name=MSTRG.12817.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1056bp|location=Sequence derived from alignment at sc0000098_pilon:1073007..1073912- (Clytia hemisphaerica_ch_hm2_pilon)
GTATCTTTGCATCACCGACAACCATTGCTGAACGTGTACAAAGCCCTGGA
GCCACTCTTCTTGTATGGACTGGATGTGGATTAATCGCTATGTTTGGTGC
ATTATGTTACGTTGAGCTTGGAACAATGTACCCAAACGAATCTGGTGGTG
AATACATCTACATTCAAAAAGCGTTCGGTGATTTGCCAGCTTTCTTGTTA
GCTTTCACCAGTGTTTCCATCATCAAGCCCTCCTCAATGGCACTGATCGC
TCTTACTTGTGGTGATTACCTGATGGTGGCCATATCTAATCTAAATCCCC
ACCAAATTTTACAAAATTGAATGGCGGCAGAAGATTCGAACCGATTATTG
AGCAATGGTGAAAATGAAAAAGAACTCAGTGAAGTGAATGGAATTGAGGC
AAAAGTGATGGGTACCGAAAAAGATGAATTATTCGCAAAAATCGAGGAGG
ACTCTGGGACTGGATTGAAACGACAAGTCAATTTGTTGGGCGGTATTTGT
CTACTGGTTGGAACGATTATCGGATCAGGTATCTTTGCATCACCGACAAC
CATTGCTGAACGTGTACAAAGCCCTGGAGCCACTCTTCTTGTATGGACTG
GATGTGGATTAATCGCTATGTTTGGTGCATTATGTTACGTTGAGCTTGGA
ACAATGTACCCAAACGAATCTGGTGGTGAATACATCTACATTCAAAAAGC
GTTCGGTGATTTGCCAGCTTTCTTGTTAGCTTTCACCAGTGTTTCCATCA
TCAAGCCCTCCTCAATGGCACTGATCGCTCTTACTTGTGGTGATTACCTG
ATGGTGGCCATATCTAATCTAAATCCCCACCAAATTTTACAAAATTGAAT
GGCGGCAGAAGATTCGAACCGATTATTGAGCAATGGTGAAAATGAAAAAG
AACTCAGTGAAGTGAATGGAATTGAGGCAAAAGTGATGGGTACCGAAAAA
GATGAATTATTCGCAAAAATCGAGGAGGACTCTGGGACTGGATTGAAACG
ACAAGTCAATTTGTTGGGCGGTATTTGTCTACTGGTTGGAACGATTATCG
GATCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12817MSTRG.12817Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12817.4.p1.exon2MSTRG.12817.4.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12817.4.p1.exon1MSTRG.12817.4.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12817.4.p1MSTRG.12817.4.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098_pilongenomesc0000098_pilon:1073007..1073912 -