MSTRG.11137.2.p1 (mRNA) -

Overview
NameMSTRG.11137.2.p1
Unique NameMSTRG.11137.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000080_pilon:89524..92409-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11137.2.p1 ID=MSTRG.11137.2.p1|Name=MSTRG.11137.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2886bp|location=Sequence derived from alignment at sc0000080_pilon:89524..92409- (Clytia hemisphaerica_ch_hm2_pilon)
GCCTTGGAATAGTTGAAACATACTTATTTCTATTTCTGTAAATTAATCCG
CAACATTTTCTTTGATTGGTTTAATTTTTTACTACTTTCTTTTTAGCCCT
CATTATTTTTCTTTTATTGTAATCATTTTCCATCAATAACAACATTGTCT
ACAAAAGTTTCATACACTTTGGGAGGTGATAAGAAAGTACTTAAAGCTCT
TGTGTTATGACTTAGTATAAGTCAAGCTTGTCGGTCAGTCGTCAGTCCTC
CCATTACAAGCACTGTCATACTTCTTGTAAAACCTTCTGAATTTAATCGT
TTTACTTTACTGAAGAAGTTCAATAAAATTTTTTTAGTGATAGATAATAT
AATGAATGTATCAAAAAATATGTCAACACCATTATTAATGTCACCAGAGT
TATCAAATCCACCTGAAATTGAGAAGATATTGGATACAACCCTTACAAAG
GTTTTGTCATTTATATTATTTCTGAAAGCAGTTGGAAGATATGTTACTTT
CACTTCCTTGAGAATAGAGAGCAAAACTCACAGGGCTTCAAAAAATGGTC
GGACAAATCACTCCTTATCCTACCCAAGAGTCATCATTTTCAAGCTAAAG
CAACTGTGGTCAGACATTTGTCCAAACCACTTGAAATCGTTATATCAACC
CATGAGTTCAGTCTAGAAATCTTGTGTTTCTGGAAAGCAGCTTTAAAAAT
GTATACATAGAGATAAACTACTGTTCCAAAATTTAAAACATCTGAAAATT
TATCCTTCTTCTAGGACAACAAAAGATACTACAAAGTTAAATGGATTAAA
GTCACTTGGGAATCGGAAGATGATATTGCTTACTTCAACAATCTCATAGA
AGCATTTTGGACAGAGTACACTAAAGAATGTTTATTGCAGTCAGAAACTG
AAAGCTGCTCAAATGTAATACTCTATCAGTATTTACAAGGAATTTTGTCT
AAGAAGTTGATATATGTGCAGCAAGAATTTTTTTTTCTGTTAGCAATCAC
TAATTTTTCTGCTAATTCAAAAAGTCTTTATGTCTAAAGAATTTGAATGT
CACATTTGCTTTTCTTTTAAATTATACAGTTAAATCATTTTAATTTTATT
ATTCTATAAAGTTGAGATGCTAAAAGATTAGTTTAGATATAATGCTAAAT
ATGTAATGTACCATCTACCACCTATAGGATTTGACCAGCAAAGATGCTTG
CCAGTATAACAACTTGGACAATATTGGCAACAAAGAGATATACAATTATA
ATCTATTGCAGCAACATAACGATGTTGTTCCTGACAGCCATCAAACAAGC
GACAAGCATCTGCTATCTCACACCCCAGTAGAATCAAATCTATTATCCAT
ATCTAGTCATGAGATGTTGTCTCCTTCAAATTGTAGCTCACACCACGTAG
CAGCGCCATCTGACATGCTACATTCTCACATCACCAATAATGAGCTTGAC
ATGATCCCATCGTTCTCTCAAGATTGTGATTATAGTTTAGATGAATCAAA
CTTGTTAAAGTCTAATGAAGAACAGAATCAAACAGCAAAAATGATTGGTA
CATAATTTTCATTGTTATAGAGAACGGGAAATATTTCAGGAAAGTATATC
AAGCTAAATTTACATTATTTTCAGATAGGAATTCATCACTTTTATACCTT
AAAGCTACTTTTGAAAGCATTAGGGCTGATTAGAGTTTTTTGACTTTTCC
ATTATACTGAGATTTTGTTAGAAATTTACTTTTTAAACTTTCAATTTTTT
GCCCATAGAAACTGATGTAACACCAGCTAAACAACTCTCTCATACACTCT
TATGTAAGGATATAGAGAAGACAGAGCCAAACAAATCTTTGGTTGTTTAC
AAATGTTCATTTTGTGCCATCAATTTTGAATCAAAAGAAAAATATTTAGA
ACATGAAAAATCACATGCAGATCGAAAGTGCATTATTTGCGGAAAGGAAT
TCCAACGTCTGGGTCACTTGAAGGTGCACATGCATTCTCATAATAATATA
AGACCCTTTGAATGCAAAGAGTGTGGAAAAGCCTTCCATGAGAAATGTTC
GTTAAATAAACATCAGCAAGTACATTCTAATGTGCGCAATCATGAATGTT
CCACATGTGGTATGAAATTTAAGCGAGCACAGCATCTTCGAAGACATAAT
GAAGTACATAAACAAAACAAACAGTTTACTTGTCTTTTATGTAATAAACA
ATTTTTACAAAAATCTGCCCTTGAAGCTCATATCAATGTTCATACAGGAA
ATAAGCCATTTAAATGTAAGGTTTGTTCTCATTCGTTTGCTGACAGGGCA
ACGTTAAGAAGACATACTTTAACGCATGCTAAAGAAAAACCTTACCAATG
TTTGTTATGCAGTAAAGAGTTTTGCCGGCAAAATTCTTTGAAACTTCACA
TGGTGAGTAAACACAAAGATTCAGAAGAATCTGCAACTTCTTCAGAATCA
ACTGAGAAGAAAAGCCAAGATGATTAAAATTAAAGTAATATTCTATCATA
ATTTATTTTAGACATTTTAATGATTTTATTATGCCTAGTTTATTTATGCT
CAAGTTTCAGATGTAGATAAGAACTTGTTTTACATTCACTCACCATCAAG
ATAAGGTTATCACTGTTTTTTACTAACATTCTGCCGGTTGGTAGGGTGAA
GGTTTAAATTACAGGCTTGCGCCAAAATGGACTTTGTTCGAGTCCTAAGC
ACTTCCAGGCAGGGAAGTATGGTGAAATATGGTGATGGACTCTCTACCTT
CACTTATTTTGTTAACTTTTACATTTTTTTGTTTGTTTATGATTTGATGT
GTTTTTGCTTGTCCTCTCAGTCTCATAAACAATTTAATTATCTGAATACC
AGGCTCAATATTGAAATTCAATAATTTATATCAGCA

Coding sequence (CDS) from alignment at sc0000080_pilon:89524..92409-

>MSTRG.11137.2.p1 ID=MSTRG.11137.2.p1|Name=MSTRG.11137.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5352bp|location=Sequence derived from alignment at sc0000080_pilon:89524..92409- (Clytia hemisphaerica_ch_hm2_pilon)
AAACTGATGTAACACCAGCTAAACAACTCTCTCATACACTCTTATGTAAG
GATATAGAGAAGACAGAGCCAAACAAATCTTTGGTTGTTTACAAATGTTC
ATTTTGTGCCATCAATTTTGAATCAAAAGAAAAATATTTAGAACATGAAA
AATCACATGCAGATCGAAAGTGCATTATTTGCGGAAAGGAATTCCAACGT
CTGGGTCACTTGAAGGTGCACATGCATTCTCATAATAATATAAGACCCTT
TGAATGCAAAGAGTGTGGAAAAGCCTTCCATGAGAAATGTTCGTTAAATA
AACATCAGCAAGTACATTCTAATGTGCGCAATCATGAATGTTCCACATGT
GGTATGAAATTTAAGCGAGCACAGCATCTTCGAAGACATAATGAAGTACA
TAAACAAAACAAACAGTTTACTTGTCTTTTATGTAATAAACAATTTTTAC
AAAAATCTGCCCTTGAAGCTCATATCAATGTTCATACAGGAAATAAGCCA
TTTAAATGTAAGGTTTGTTCTCATTCGTTTGCTGACAGGGCAACGTTAAG
AAGACATACTTTAACGCATGCTAAAGAAAAACCTTACCAATGTTTGTTAT
GCAGTAAAGAGTTTTGCCGGCAAAATTCTTTGAAACTTCACATGGTGAGT
AAACACAAAGATTCAGAAGAATCTGCAACTTCTTCAGAATCAACTGAGAA
GAAAAGCCAAGATGATTAAGATTTGACCAGCAAAGATGCTTGCCAGTATA
ACAACTTGGACAATATTGGCAACAAAGAGATATACAATTATAATCTATTG
CAGCAACATAACGATGTTGTTCCTGACAGCCATCAAACAAGCGACAAGCA
TCTGCTATCTCACACCCCAGTAGAATCAAATCTATTATCCATATCTAGTC
ATGAGATGTTGTCTCCTTCAAATTGTAGCTCACACCACGTAGCAGCGCCA
TCTGACATGCTACATTCTCACATCACCAATAATGAGCTTGACATGATCCC
ATCGTTCTCTCAAGATTGTGATTATAGTTTAGATGAATCAAACTTGTTAA
AGTCTAATGAAGAACAGAATCAAACAGCAAAAATGATTGGACAACAAAAG
ATACTACAAAGTTAAATGGATTAAAGTCACTTGGGAATCGGAAGATGATA
TTGCTTACTTCAACAATCTCATAGAAGCATTTTGGACAGAGTACACTAAA
GAATGTTTATTGCAGTCAGAAACTGAAAGCTGCTCAAATATGAATGTATC
AAAAAATATGTCAACACCATTATTAATGTCACCAGAGTTATCAAATCCAC
CTGAAATTGAGAAGATATTGGATACAACCCTTACAAAGAAACTGATGTAA
CACCAGCTAAACAACTCTCTCATACACTCTTATGTAAGGATATAGAGAAG
ACAGAGCCAAACAAATCTTTGGTTGTTTACAAATGTTCATTTTGTGCCAT
CAATTTTGAATCAAAAGAAAAATATTTAGAACATGAAAAATCACATGCAG
ATCGAAAGTGCATTATTTGCGGAAAGGAATTCCAACGTCTGGGTCACTTG
AAGGTGCACATGCATTCTCATAATAATATAAGACCCTTTGAATGCAAAGA
GTGTGGAAAAGCCTTCCATGAGAAATGTTCGTTAAATAAACATCAGCAAG
TACATTCTAATGTGCGCAATCATGAATGTTCCACATGTGGTATGAAATTT
AAGCGAGCACAGCATCTTCGAAGACATAATGAAGTACATAAACAAAACAA
ACAGTTTACTTGTCTTTTATGTAATAAACAATTTTTACAAAAATCTGCCC
TTGAAGCTCATATCAATGTTCATACAGGAAATAAGCCATTTAAATGTAAG
GTTTGTTCTCATTCGTTTGCTGACAGGGCAACGTTAAGAAGACATACTTT
AACGCATGCTAAAGAAAAACCTTACCAATGTTTGTTATGCAGTAAAGAGT
TTTGCCGGCAAAATTCTTTGAAACTTCACATGGTGAGTAAACACAAAGAT
TCAGAAGAATCTGCAACTTCTTCAGAATCAACTGAGAAGAAAAGCCAAGA
TGATTAAGATTTGACCAGCAAAGATGCTTGCCAGTATAACAACTTGGACA
ATATTGGCAACAAAGAGATATACAATTATAATCTATTGCAGCAACATAAC
GATGTTGTTCCTGACAGCCATCAAACAAGCGACAAGCATCTGCTATCTCA
CACCCCAGTAGAATCAAATCTATTATCCATATCTAGTCATGAGATGTTGT
CTCCTTCAAATTGTAGCTCACACCACGTAGCAGCGCCATCTGACATGCTA
CATTCTCACATCACCAATAATGAGCTTGACATGATCCCATCGTTCTCTCA
AGATTGTGATTATAGTTTAGATGAATCAAACTTGTTAAAGTCTAATGAAG
AACAGAATCAAACAGCAAAAATGATTGGACAACAAAAGATACTACAAAGT
TAAATGGATTAAAGTCACTTGGGAATCGGAAGATGATATTGCTTACTTCA
ACAATCTCATAGAAGCATTTTGGACAGAGTACACTAAAGAATGTTTATTG
CAGTCAGAAACTGAAAGCTGCTCAAATATGAATGTATCAAAAAATATGTC
AACACCATTATTAATGTCACCAGAGTTATCAAATCCACCTGAAATTGAGA
AGATATTGGATACAACCCTTACAAAGAAACTGATGTAACACCAGCTAAAC
AACTCTCTCATACACTCTTATGTAAGGATATAGAGAAGACAGAGCCAAAC
AAATCTTTGGTTGTTTACAAATGTTCATTTTGTGCCATCAATTTTGAATC
AAAAGAAAAATATTTAGAACATGAAAAATCACATGCAGATCGAAAGTGCA
TTATTTGCGGAAAGGAATTCCAACGTCTGGGTCACTTGAAGGTGCACATG
CATTCTCATAATAATATAAGACCCTTTGAATGCAAAGAGTGTGGAAAAGC
CTTCCATGAGAAATGTTCGTTAAATAAACATCAGCAAGTACATTCTAATG
TGCGCAATCATGAATGTTCCACATGTGGTATGAAATTTAAGCGAGCACAG
CATCTTCGAAGACATAATGAAGTACATAAACAAAACAAACAGTTTACTTG
TCTTTTATGTAATAAACAATTTTTACAAAAATCTGCCCTTGAAGCTCATA
TCAATGTTCATACAGGAAATAAGCCATTTAAATGTAAGGTTTGTTCTCAT
TCGTTTGCTGACAGGGCAACGTTAAGAAGACATACTTTAACGCATGCTAA
AGAAAAACCTTACCAATGTTTGTTATGCAGTAAAGAGTTTTGCCGGCAAA
ATTCTTTGAAACTTCACATGGTGAGTAAACACAAAGATTCAGAAGAATCT
GCAACTTCTTCAGAATCAACTGAGAAGAAAAGCCAAGATGATTAAGATTT
GACCAGCAAAGATGCTTGCCAGTATAACAACTTGGACAATATTGGCAACA
AAGAGATATACAATTATAATCTATTGCAGCAACATAACGATGTTGTTCCT
GACAGCCATCAAACAAGCGACAAGCATCTGCTATCTCACACCCCAGTAGA
ATCAAATCTATTATCCATATCTAGTCATGAGATGTTGTCTCCTTCAAATT
GTAGCTCACACCACGTAGCAGCGCCATCTGACATGCTACATTCTCACATC
ACCAATAATGAGCTTGACATGATCCCATCGTTCTCTCAAGATTGTGATTA
TAGTTTAGATGAATCAAACTTGTTAAAGTCTAATGAAGAACAGAATCAAA
CAGCAAAAATGATTGGACAACAAAAGATACTACAAAGTTAAATGGATTAA
AGTCACTTGGGAATCGGAAGATGATATTGCTTACTTCAACAATCTCATAG
AAGCATTTTGGACAGAGTACACTAAAGAATGTTTATTGCAGTCAGAAACT
GAAAGCTGCTCAAATATGAATGTATCAAAAAATATGTCAACACCATTATT
AATGTCACCAGAGTTATCAAATCCACCTGAAATTGAGAAGATATTGGATA
CAACCCTTACAAAGAAACTGATGTAACACCAGCTAAACAACTCTCTCATA
CACTCTTATGTAAGGATATAGAGAAGACAGAGCCAAACAAATCTTTGGTT
GTTTACAAATGTTCATTTTGTGCCATCAATTTTGAATCAAAAGAAAAATA
TTTAGAACATGAAAAATCACATGCAGATCGAAAGTGCATTATTTGCGGAA
AGGAATTCCAACGTCTGGGTCACTTGAAGGTGCACATGCATTCTCATAAT
AATATAAGACCCTTTGAATGCAAAGAGTGTGGAAAAGCCTTCCATGAGAA
ATGTTCGTTAAATAAACATCAGCAAGTACATTCTAATGTGCGCAATCATG
AATGTTCCACATGTGGTATGAAATTTAAGCGAGCACAGCATCTTCGAAGA
CATAATGAAGTACATAAACAAAACAAACAGTTTACTTGTCTTTTATGTAA
TAAACAATTTTTACAAAAATCTGCCCTTGAAGCTCATATCAATGTTCATA
CAGGAAATAAGCCATTTAAATGTAAGGTTTGTTCTCATTCGTTTGCTGAC
AGGGCAACGTTAAGAAGACATACTTTAACGCATGCTAAAGAAAAACCTTA
CCAATGTTTGTTATGCAGTAAAGAGTTTTGCCGGCAAAATTCTTTGAAAC
TTCACATGGTGAGTAAACACAAAGATTCAGAAGAATCTGCAACTTCTTCA
GAATCAACTGAGAAGAAAAGCCAAGATGATTAAGATTTGACCAGCAAAGA
TGCTTGCCAGTATAACAACTTGGACAATATTGGCAACAAAGAGATATACA
ATTATAATCTATTGCAGCAACATAACGATGTTGTTCCTGACAGCCATCAA
ACAAGCGACAAGCATCTGCTATCTCACACCCCAGTAGAATCAAATCTATT
ATCCATATCTAGTCATGAGATGTTGTCTCCTTCAAATTGTAGCTCACACC
ACGTAGCAGCGCCATCTGACATGCTACATTCTCACATCACCAATAATGAG
CTTGACATGATCCCATCGTTCTCTCAAGATTGTGATTATAGTTTAGATGA
ATCAAACTTGTTAAAGTCTAATGAAGAACAGAATCAAACAGCAAAAATGA
TTGGACAACAAAAGATACTACAAAGTTAAATGGATTAAAGTCACTTGGGA
ATCGGAAGATGATATTGCTTACTTCAACAATCTCATAGAAGCATTTTGGA
CAGAGTACACTAAAGAATGTTTATTGCAGTCAGAAACTGAAAGCTGCTCA
AATATGAATGTATCAAAAAATATGTCAACACCATTATTAATGTCACCAGA
GTTATCAAATCCACCTGAAATTGAGAAGATATTGGATACAACCCTTACAA
AG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11137MSTRG.11137Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11137.2.p1MSTRG.11137.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11137.2.p1.exon4MSTRG.11137.2.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11137.2.p1.exon3MSTRG.11137.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11137.2.p1.exon2MSTRG.11137.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11137.2.p1.exon1MSTRG.11137.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080_pilongenomesc0000080_pilon:89524..92409 -