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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:644400..646384+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11085.1.p1 ID=MSTRG.11085.1.p1|Name=MSTRG.11085.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1985bp|location=Sequence derived from alignment at sc0000079_pilon:644400..646384+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGTAAGAATTGTTAACTATTCGAACATGTCCCAAAAGTCAGCCAGCTAT
TTATCAGTGTAATGTATAAACTATGGTTATAGGAATTTAAAAAAGTCTCA
AACATCAACAAGCTTAAAGTTAAAGATATCAATAATCAAACAGAATTAGT
GTACTGTAAGGCATACAATTATTGGCTATTCAAGCCATGGCATCAGGTAa
atatattattatttattgtttaaaatgaagtaaggaatttttatctttat
tacTATCATATGGAACAATATATGAAATCAAAAAGTAAATTTATATATTA
TCTTGACCCTTATATTGAAAGTGATTATAAAGTTATTATTTGGACTTTTT
GGacaataaaaattattaaaaagtgaTTCTTGTTTACCAAAAACAGTTAT
TTAATCTGCtttttttAAGCGATTTACTTGACTTCTTCTCTCATTTTTTC
AAGGTTCTACTACATCTGACACCAATAAAATCATGCAATCAGATGACTGG
ACTGTACCGGGTAAAGCCTTTTTTGTATTTGTACTCTCATAGCATAATTT
ATCGGGttgaatttgtcaaaaaaaagtttcatttttttgttttatcattt
tattatgCTTTCACAAGAAGCTTAAGACAGAAGTTCAAGTATAATTAGTT
TCTACAAAGGATTGACTACAACTAGTACAAGAACGCAACAATTGTTTGGT
TGTAGTGATATCTTTGACAAgttttcccaaaatattttgcagcAATTTTG
TATATACCATGAAgaacctttttattttatatacctTTAGGACCTTCTAC
AGCATATATGCCAGCTACTGATACAGAAAGATCAATAAATTCTACGTTTT
GGGAAGGTATTCtaattgtaattatttttcagtcattttttttttatgtg
cATTGTTGCCTCTTACTTTGTTACTTTTACCTTTTTGTACATTCCGTTTA
ATTGGGTCTTCTCTTATTTTGTTTAGATATCAATGAATCAACTTCTAATG
CCTTCGACAAGATTATCAAGACCAGCGAGGCGTGCTACCTTATCCATTCT
ATTGATGTTATCTTGGAAGCAGCTTCCCACGAAAGCCATTTGAGTCTGCT
CTCATGTGAACAAAGCCTACTTATATTCTTTCAATACATTTTCCAAaggc
tagatttttgaaattctcaatgaGGGTTTTCTTGCAGTAAATAACTTGAG
CTGAAGAATATCTAAGATTctgcttttacttttttcttttttttaatgct
ccaaaggctagatttttgaaattctcaatgagggttatcttgcagtaaat
aacttgagctgaagaatatctaagattctgcttttactttttttcatttt
ttgtatgcCATTTAAGGttcatcttttttaaaaaagccaTATCAAATAGG
TTAAGTGAATAAGACCAACCAAGAATGTCCAACCTTACAAATAGGGTACA
ATACATTGTTATCaggaggacccaccatggttgggtccgaatagaaaatt
ttgggaaatttatACTTCAAAACAGCCTGTAAGAGCCCTGGAAATagaag
atttgattgaaaaaagaaattcaagtattttcaagtattccaatttatca
ttttcaagtatatactggaaaaatgggcattttttcaaaaactccagtat
aatcaagtaccaatatttttttccagtatattcaagtattttcaagtatt
tccagtatcgctggccaccctgaTCCAGGACCGCTTTCCAACATCCCATG
AAAGCCTACCTGCAAATCTGTGACTGTTCTGGGAAGTCAGAAGTCGCCTA
TCGCATTGGAACGGTATAATAATGTTAGACAAACGCCTTGTGATACCCAA
GGAACTCCGTCATCAGATCCTTCAAGCCCTTCATTCCACCCATCAAGGCT
GCACAGGCATGCAGGCCCGAGTCAGTCAATGATTGTATCTATTGGCCAGG
AATCAACAAAGATATCAACAGAATCCATGACTGCT Coding sequence (CDS) from alignment at sc0000079_pilon:644400..646384+ >MSTRG.11085.1.p1 ID=MSTRG.11085.1.p1|Name=MSTRG.11085.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1545bp|location=Sequence derived from alignment at sc0000079_pilon:644400..646384+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCAGGTTCTACTACATCTGACACCAATAAAATCATGCAATCAGA
TGACTGGACTGTACCGGGACCTTCTACAGCATATATGCCAGCTACTGATA
CAGAAAGATCAATAAATTCTACGTTTTGGGAAGATATCAATGAATCAACT
TCTAATGCCTTCGACAAGATTATCAAGACCAGCGAGGCGTGCTACCTTAT
CCATTCTATTGATGTTATCTTGGAAGCAGCTTCCCACGAAAGCCATTTGA
GTCTGCTCTCATtatattcaagtattttcaagtatttccagtatcgctgg
ccaccctgaATGGCATCAGGTTCTACTACATCTGACACCAATAAAATCAT
GCAATCAGATGACTGGACTGTACCGGGACCTTCTACAGCATATATGCCAG
CTACTGATACAGAAAGATCAATAAATTCTACGTTTTGGGAAGATATCAAT
GAATCAACTTCTAATGCCTTCGACAAGATTATCAAGACCAGCGAGGCGTG
CTACCTTATCCATTCTATTGATGTTATCTTGGAAGCAGCTTCCCACGAAA
GCCATTTGAGTCTGCTCTCATtatattcaagtattttcaagtatttccag
tatcgctggccaccctgaATGGCATCAGGTTCTACTACATCTGACACCAA
TAAAATCATGCAATCAGATGACTGGACTGTACCGGGACCTTCTACAGCAT
ATATGCCAGCTACTGATACAGAAAGATCAATAAATTCTACGTTTTGGGAA
GATATCAATGAATCAACTTCTAATGCCTTCGACAAGATTATCAAGACCAG
CGAGGCGTGCTACCTTATCCATTCTATTGATGTTATCTTGGAAGCAGCTT
CCCACGAAAGCCATTTGAGTCTGCTCTCATtatattcaagtattttcaag
tatttccagtatcgctggccaccctgaATGGCATCAGGTTCTACTACATC
TGACACCAATAAAATCATGCAATCAGATGACTGGACTGTACCGGGACCTT
CTACAGCATATATGCCAGCTACTGATACAGAAAGATCAATAAATTCTACG
TTTTGGGAAGATATCAATGAATCAACTTCTAATGCCTTCGACAAGATTAT
CAAGACCAGCGAGGCGTGCTACCTTATCCATTCTATTGATGTTATCTTGG
AAGCAGCTTCCCACGAAAGCCATTTGAGTCTGCTCTCATtatattcaagt
attttcaagtatttccagtatcgctggccaccctgaATGGCATCAGGTTC
TACTACATCTGACACCAATAAAATCATGCAATCAGATGACTGGACTGTAC
CGGGACCTTCTACAGCATATATGCCAGCTACTGATACAGAAAGATCAATA
AATTCTACGTTTTGGGAAGATATCAATGAATCAACTTCTAATGCCTTCGA
CAAGATTATCAAGACCAGCGAGGCGTGCTACCTTATCCATTCTATTGATG
TTATCTTGGAAGCAGCTTCCCACGAAAGCCATTTGAGTCTGCTCTCATta
tattcaagtattttcaagtatttccagtatcgctggccaccctga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:644400..646384 + |
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