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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000069_pilon:538665..547335+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10082.1.p1 ID=MSTRG.10082.1.p1|Name=MSTRG.10082.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8671bp|location=Sequence derived from alignment at sc0000069_pilon:538665..547335+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAGCATTAAATTAAAAGTACTAACAACTATTTCAACACAATATTAAC
GACAATGAAACTGGTCGATATCAcaaaagcttttcaaaatgcAAGAAAGT
ATACCAAAGATATCAATGAAACAGATTGTCTGAATGCTATCCAGAAACTG
AAGCTGTGAGTTTCTAATCTCTATCTATATCTTTATAACCATTGAGACTT
ACATTTTACAGTTCAGTAGAAGACCTAACAGACTTTGCCTGACTGACATA
AATTTcacccaaaaaacaaaaacaaacaagaaaacaTGTGCAGGTCCTTA
TGGGAAATATTTTACCTTAAAGCAAGGTTTAACTAAATCACACTGTGCAT
ATTCTTACTGCTGTTTCTCATCTTTACGTTTGATATAAACCTCTATATTC
TTTCGTTCCAGAGGTCTTTGTTACAAGTTAGAAATTGGTTATCCTTTTGT
TTTTCTCAGATCAAACTACAAGGATATTCCCAGTATCCCACTCAACAAGG
TGAAAGAATTGTTTGTGCAGCTTCTTGGAGATGGTTTTCATTTGGATGAT
ACGAAATTTAAAGAAGTTCAAGATTTTCTTTCCAATTGCACAGTAAGATT
TATCATTTGTTATCTTAGTTGTCCCTTTTATAGCAGTTTGAACTACCTAC
CTACAGTGCGTCTaaaaaaaTGATTTACCGAGTGTCTCAGAAAAAAGTCT
CCCACTTTCGGTATAATATACCCtcgttttttgcattttttaactATTTT
GATATCAAATCTCTAGAAATTACACGGTTTTAAGGTACAATCTTTGATCT
TTCTTTGTTATAAAAGTAGCATTTGATTGACTGCTTCTACCATACAAATG
GTAGATCCCAAACCtacgaaaaaaataaactatGTACTCAACTAATAAAC
TCTTGTATGGTTTGCATTGAAAGacttgtctttgttttttagttgAAGAA
AATGGTCGACGAGCGACTATTAGCTAAGGTGCTGAGATATCTTCTTCGAA
AGGTAATTGtctttttagaatattttagaaaatcgTTGTGCGCACTTTCT
TCGTGAAGTTTCTAAAGATTCAAATCGCTTCACACTTCTTCCCTATTCTG
ATGCAAGGCTAGATGCATTATATTATTAAAGTAACTTGAAAAATGACTCT
TTATTGAAACTCCTTGCTTCAACCCATTTTGTTATATATAAAACTAGACA
GGAACACGTCGGCGTTTTAAATCTGATGTATACTCATTTCACCATCATTA
TAtgaagaagaaatcatagcatagaTCCAGGCTAATACAAGACATAAACA
ACATCCGCCTTAGTGTCCATAGCAtccattttgatgacgttttgTGTTTC
TAACTGAATATTGTGATGACGAAAGAGCCTGGTGCACAACggtccaaatt
tttcaaaagttctcTGCTATCTTATAAAGGAAGATATTTacgcgggaaga
aattttctcggaatttaatttcgccgTTCACAGCACAAAATTCGGAAGTT
TCGCGGttgagagacttttttgtttataataatatggcctattttgcctt
aaaaagaccaattttagaggTGAATTGTCAATTCCTTAGAACATTCTTGT
TACTCTATatgtaaatatattttcagcATGAGGCTACCGTGTCGAATATC
GAATCATCCGCCACTACATTTAGCCCAAAACCGTTATTTCCTTTGACGAG
ACGTGTATTTGTCAGTTTGAATCAAATCATTCTCCACTAAAACCACACTA
ACTAGCAAACTTTGTTTCAGAACTTATTACTGTTATTCCAATGGCGGTTT
GTCGgctgcccacgctaaagctctaaaggagcgggccgaTTTCCCATCGG
AAAGATAAGTCGACCTTcgatgtgccgcatccccagtcgggtttAGCTAC
CCTTGGCCTAAACCTGAAAATATTTCGGCTGGACCCGCTAacccccgaaa
acgagggctgagTTACCGCTGCAGcatccttgacgcggtcttgcaaaatt
ccatCATCTAAACCttaattttcccgaccttcagaacTTTAGCGTGTCAG
TTGAAATTTCTACATCTAATGAGTGCCAGATAATTTCAGAACTGTACCGT
TAACATATCttttttttAGGATAGTACCAAAAAGGTTGCACTTTTGATAG
TGGAtgtacagaacgattttatcaGTGGTTCACTAGCCTTGAAACATTCA
CCAGCCTGTGAGGATGGTGTTGATGTTGTACCCGTCATCAATCAAATGGt
tcaaatgaaatttcatttctttgtatATACAATGGATTGGCATCCACAAG
ATCATATCTCGTTTATCACCAATGTTTCAAGGTacttcgtttttttttgt
ttatagttTAATACACAATAGGCTGTTTTAACCCTTTAACAGCCGTGGCA
tttttttACAccctcgacctatttgccaatgtcggcatatgccgacatgg
gcaaaaggtagcgattttcacttcattttctgaataatgtATGAAGTATC
AGTCAAGGACTAAAATTGtgagttgaacattgtagaATATAGTTATTTTg
caacatagaaaagtttttaactattcattttttggacctaccccggtggg
gtgaaggtcctataaattaacccgtgttcgttagttcgttcgttagttac
caacttttctcgagattggctcattcaatttttctgattttttgcacaaa
ggtgcattactataaaccctcgaatgtgacggagcccgattttcgaaaaa
aaaatttttccggccggtagaaccggaaatgtcccgaaaaaagcggtttt
ttgagattttctcgagattttatcattagttttttgcgattttttgcaca
tagatgcacattagtactgccgaaaaggtgtcgaaaaccgtttgccgaaa
aaaaattttttccggtctgtagaaccggaaatgtgccggaaatcgacgtt
ttttcacatttccgtcacatttttttcaacttatttaattgtttctttac
agaaaaatgttttttatgatgatgcccaaaacttagcatcgtttgatttc
caaaaaatcatcctttgaatccggaactccttaaaaatcgccggaacagc
cgaaaaccggcgtaaaacggttttccttcattttttcaacttatactcga
cagattttcatgattttttgcacaatgatgtaaaatggcaatgcccaaaa
tgtgacagagcccaattttcgaaaaagaaatttttccggccggtagaacc
ggaaatgtcccgaaaaaagtggttttttgagattttctcgagattttatc
attagttttttgcgattttttgcacatagatgcacattagtactgccgAa
aaggtgtcgaaaaccgtttgcagaaaaaaaaaattttccggtctgtagaa
ccggaaatgtgccggaaatcgtcgttttttcacatttccgtcacattttt
tcaacttatttaattgtttctttacagaaaaatgttctttatgatgatgc
ccaaaacttagcatcgtttgatttccaaaaaaatcatcctttgaatccgg
aactccttaaaaatcgccggaacagccgaaaaccggcgtaaaacggtttc
cttcattttttcaacttatactcgacagattttcatgattttttgcacaa
tgatgtaaaatggcaatgctcaaaatgtgacagagcccaattttcgaaaa
agaaatttttccggccgctagaaccggaaatgtcccgaaaaaagcggttt
tttgagattttctcgagattttctcattagttgtttgcgattttttgcac
atagatgcacattagtactgccgaaaaggtgtttcttaattgctttctcc
gttccaatagatatataattcgaaatttaaaattatacattacttccatt
aaattctaattattcgttttataaataggtaggtccattaaagtattgct
tgtttcatttcaaaccatctaatacaaaatctttgtagaagtgttaaatt
ttgcggcaaagaaatggaaatttcacatgtcggcatatgccgacaatggc
atggaaatcaaaaatgctcatgtcggcataggcacggaaagggttaagca
TGTTCATAtcttctacaatcagtgccgaaatatattggtAATTTTGGGAG
TTGTTACTCTCGGGTACATAATAGGGGGATTggaataggggggggggggg
ggttggaaaaatctcaaaacttaattagcgggggggttggaataaaaatg
ttccgggtggaaaatatttgagaaggaggctaatacagcagaatttaCCC
GAGAGTAAGTGGTTTCAGGCTATGTTCTCAGCCACATTGGAATATTGGAA
TATTTTGAGCtattagatcctgagatcctaagatCGCTAAGTCTAATGtg
aaaactcagagttaaaattttactttctaaCTTACTTCAAAGCACATAAT
AATCACTTGTGGCTTTGAAGTTTTgggggaattccccttttgtgccaaat
atttcggcgccgattgtagaGGGGTTTTTATTTGACTCATTCGAGTAAGA
AATGTAAGAGAGACCTTCCAATATTCAGAGCTCCTTTCATCTTCTAGTGA
TTTAAAAAatggtatttcttgaatttcttgagctgtactttatatatttt
catgaaattttgcacactgatgcaaaatgtcaatacctaaattgtgaggg
agaccgattttcgaaaaacattttttccggccgaaaatgccggaaatatg
ccggaaaaaccggttttttgacattttgtcgaattttcatcttttgtttt
ttcagattttttgcagagagatgcgtattcgcaatgctcaaaaaatggcc
gagttcgattttcgagaaaaaaattttccggttgaaaatgccggaaatcg
ccgtttttgcagattttcattggattttttccttatatttctatgttttt
cacacaaaaacattattaatagcaatgcccaccatcaagcatgtttcaat
tttccataaaattgatttttgaagccggaactattttaaaagtcgccgga
acaacctattttcgccggaaaaacggtatttcttgaatttctcgagctgt
acattatatatttttatgaaattttgcacactgatgcaacatgacaatac
ctaaaatgtgacggagaccgattttcgaaaaacattttttccggccgaaa
atgccggaaatatgctggaaaaaccggttttttgacattttgtcgaattt
tcatcttttgttttttctgattttttgcaggaagatgcgtattcgcaatg
ctcaaaaaatggccgagttcgatttttgagaaaaaaaattttccggttga
aaatgccggaaatcgccgttttttgcagattttcattggattttttcctt
atatttctatgtttttcacacaaaaacattattaataacaatgctcacca
tcaagcatgattcaattgtcaataaaactgattattgcgaccagaacttc
ctatttatttttccctacaacccttccctctcccccatcaCCAATCAATG
AGGAATTctttgtgttgtgtattttcgctaaacgctatattttctgactg
atttttttcatttttcttttcgcattgctatctaactttcatcatcaggt
aggtctattcagcatgttgcttgtttacgTTCTGAGTTTTAAGAATATTA
AATTCATCTATCTAATTTTATCTGGAAGTTCCTACAGGAaagttgtctgt
acacagaccgtgtatttacggctaatttcaaaattcattactaTGAAGTG
ATAAACGTGTGATGCATTCTGGTACAGAACAGGGAAGGGGTCCGTGTAAC
AGTTTTTGGAGGAGATGAAATTAAGGtgtactgaaataaaaaaaatctga
gGGATTCCAAAAAGTGAAGATAAAACCTAAGAGGTCCCCAGAAAAgtcga
agaattttttttcgtaaAGGAcctctcccggggggggggaggtggtactc
aggcaaatggagggtacggtatttgttgcccttaagggtacttttttgga
tttccaactaagggttggaaaaatcagaaaatctaatttcagtcccacta
agggccggaaaaataggaaaatttcaactttttacttcctgaaagatcga
aatttggtcaaaattggtccctttgttttctccttttcagtcccggtaag
ggtccaaaggtcgaaagtcgggcggcacccccccccgtcagctcgcaacc
ctagtacaccccccccccccccccggggacctCTTCATGAagcatatatt
tttttgtactttttggtGCCTAAAATTAAGCAAtccaaatatttatttta
agttACCCTCCCATGGATGTTATTGGGACCCCCgcccactttttgaaaat
actttgCGTTGTTAAAAGAAAGGTCCCTTATTTTTGCTCTGAGTAGGACG
ATAACTTAGACTGACTCCTATTTTGCCCTTGTATTTTGTATCCTCTATTT
TCTCCAATAATATGATCAGAATCGAGATGAAATTGATTACTTGCTGGCTC
TTTACTTAATATTGAAATGAATCATTTGGTTTTCttcaatttcgaatgtt
ttgattttgtcttTGTATGCCATTTTTGTCAATCAGaggtgacgtaatgt
tttcatCCATCGGATTGTTCTATTGGTTCTTTTCGATTTCAATTAggttt
ctgattggtcaaaaaaCACTAGAAATCACTGAAGCGTAAAATCTGAGCAA
ATAATTCGAATCATGACATTTGCGTCACGAGTTCCGGAAAAGCGATCGTT
TTGTTTGGATATGTGTAGACAAGAGTGGGggtatttttttgagttttaaa
agattttttttcttttctggtGTGGTGTACATTCAATCAAGCTCTCGAGG
TAACAGGTTTGGACTTTCGATTTTGCTGTTGTTGAGCTATGATAGCGGAT
CTGAAATCTTCGAGTATTATAATTGTCTGACAATTCAGGACTTTTTTCAc
tgttcttaagttttttcaagttttgaatgAGTTTCTTTCGTAGTATGAAA
TCTCTGTCTGTCTGTCCGTACAGTTAGATACTAAtaaatgatttttgttt
tgctagTAGGTGTAAGAGGGTTTTTGTTAAACAGCCCTTTAACCCAAGAT
TTCCGGCCATACTCTCACGACCTAGTCCTACCGAGTAATATTTTCATCAG
TATTATTTAGGCACCAAAttggggaaagtgacgaaattttcctcCCAATC
AATTTCATTGAACTATGACAAAATTGTCTGATGATGTATACTGTGATGTA
TGTGCTTATTATAAGCTTTTTATGAAACATCTTATTTCACCTTTTGCTCT
GAATATTTACGactcaaatgaaatttttcacactacTGTAACCTTTTTGT
TGTATTGTGACATATTAAAAGAGTGTCCAGATTTTCTATCCTGgcaacat
ttttattccaattcTCAGGAAATCAAAGCTGATAATTCAATGCGTCTACT
CAAAGGAACCGATCCAAAAGTGGATAGCTATAGTGCGTTCTGGGATAACA
ATCATACACACCAAACGAAGCTTTTCTCAGAACTGGTCGATCGTGATATT
ACAGATATCGTTGTCTGTGGATTAGCAACCGATATCTGTGTCAAGTTCAC
TTCAATTGATGGTCAGAAACATGGCTTCAACACTACAGTTGTTCTGGATG
CGTGTCGTGGTGTTGCTCATGAAGGCATTGAAACTGCCAGGTGTGAGCAA
CAAGCTTGCGGTATCAAAATTATTGTTAGCTCTGAGGTTTCATCCTTGTT
GGCCTAAGCTATTGACATCGCTAAGAGAAGACTGAATAAAGTTTACTGGC
TAGAATCACACTCAGTAGTGTATGAAGCATTTTTAATATTGGGAGGGGGG
TGACACCGTGGGTGCCGACCATGCTTTGATCTGAGGGGGGAATTGGGAAA
TTTGCAAAATAGGCCTCTATATTTTCTCTAATGTTTTAGATAGTCGTCTT
TAAGAAACCAtctctgaaaaaattattgggaaaagccccccccctgcACC
CCCGGCGGTTACTACGGCATTGTACTCAATATGAAGGGAAGGGGCAGTTT
TTTGGGAATATGTACGTCACTTGTAATTAATTTGtaattcaattaattta
ttgtctttttagactttttttttattattttctattatgtttttaGGGTT
TAAATCGAACACccaaatagaacaaaaaattatttgccCTTCGGGATAGC
AGATATTCCGCTCAATAGCCGGAAAATTAACAGCtcggatggttttggag
tgtttCTTCTGATTGATTTTCAAATAGGAATTTCCCAGTTGgagctgaaa
ttgtagggtatttctTCCACCGCGGATGACCTAAATTACTagcatagtgt
gcaagggggctCCAGGTCCCGCCTaaccctaaaattcccaccctcaatcc
agactcccagatcccagctaaaaatgttATCCCCACGAAAAATTATACTA
GTTCGAGGAAATAAACGAAAATTCTTAcagtataataataaaaaggagaa
aactttAGCTTAGTTtagtaaaagaattatttatagaacatagaatttag
aaaaaattataattatattgaaaataagaaaaaacaaacgttaactttta
ccaaaacaacaaaaatcccac Coding sequence (CDS) from alignment at sc0000069_pilon:538665..547335+ >MSTRG.10082.1.p1 ID=MSTRG.10082.1.p1|Name=MSTRG.10082.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3315bp|location=Sequence derived from alignment at sc0000069_pilon:538665..547335+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACTGGTCGATATCAcaaaagcttttcaaaatgcAAGAAAGTATAC
CAAAGATATCAATGAAACAGATTGTCTGAATGCTATCCAGAAACTGAAGC
TATCAAACTACAAGGATATTCCCAGTATCCCACTCAACAAGGTGAAAGAA
TTGTTTGTGCAGCTTCTTGGAGATGGTTTTCATTTGGATGATACGAAATT
TAAAGAAGTTCAAGATTTTCTTTCCAATTGCACAttgAAGAAAATGGTCG
ACGAGCGACTATTAGCTAAGGTGCTGAGATATCTTCTTCGAAAGGATAGT
ACCAAAAAGGTTGCACTTTTGATAGTGGAtgtacagaacgattttatcaG
TGGTTCACTAGCCTTGAAACATTCACCAGCCTGTGAGGATGGTGTTGATG
TTGTACCCGTCATCAATCAAATGGttcaaatgaaatttcatttctttgta
tATACAATGGATTGGCATCCACAAGATCATATCTCGTTTATCACCAATGT
TTCAAGGAAATCAAAGCTGATAATTCAATGCGTCTACTCAAAGGAACCGA
TCCAAAAGTGGATAGCTATAGTGCGTTCTGGGATAACAATCATACACACC
AAACGAAGCTTTTCTCAGAACTGGTCGATCGTGATATTACAGATATCGTT
GTCTGTGGATTAGATGAAACTGGTCGATATCAcaaaagcttttcaaaatg
cAAGAAAGTATACCAAAGATATCAATGAAACAGATTGTCTGAATGCTATC
CAGAAACTGAAGCTATCAAACTACAAGGATATTCCCAGTATCCCACTCAA
CAAGGTGAAAGAATTGTTTGTGCAGCTTCTTGGAGATGGTTTTCATTTGG
ATGATACGAAATTTAAAGAAGTTCAAGATTTTCTTTCCAATTGCACAttg
AAGAAAATGGTCGACGAGCGACTATTAGCTAAGGTGCTGAGATATCTTCT
TCGAAAGGATAGTACCAAAAAGGTTGCACTTTTGATAGTGGAtgtacaga
acgattttatcaGTGGTTCACTAGCCTTGAAACATTCACCAGCCTGTGAG
GATGGTGTTGATGTTGTACCCGTCATCAATCAAATGGttcaaatgaaatt
tcatttctttgtatATACAATGGATTGGCATCCACAAGATCATATCTCGT
TTATCACCAATGTTTCAAGGAAATCAAAGCTGATAATTCAATGCGTCTAC
TCAAAGGAACCGATCCAAAAGTGGATAGCTATAGTGCGTTCTGGGATAAC
AATCATACACACCAAACGAAGCTTTTCTCAGAACTGGTCGATCGTGATAT
TACAGATATCGTTGTCTGTGGATTAGATGAAACTGGTCGATATCAcaaaa
gcttttcaaaatgcAAGAAAGTATACCAAAGATATCAATGAAACAGATTG
TCTGAATGCTATCCAGAAACTGAAGCTATCAAACTACAAGGATATTCCCA
GTATCCCACTCAACAAGGTGAAAGAATTGTTTGTGCAGCTTCTTGGAGAT
GGTTTTCATTTGGATGATACGAAATTTAAAGAAGTTCAAGATTTTCTTTC
CAATTGCACAttgAAGAAAATGGTCGACGAGCGACTATTAGCTAAGGTGC
TGAGATATCTTCTTCGAAAGGATAGTACCAAAAAGGTTGCACTTTTGATA
GTGGAtgtacagaacgattttatcaGTGGTTCACTAGCCTTGAAACATTC
ACCAGCCTGTGAGGATGGTGTTGATGTTGTACCCGTCATCAATCAAATGG
ttcaaatgaaatttcatttctttgtatATACAATGGATTGGCATCCACAA
GATCATATCTCGTTTATCACCAATGTTTCAAGGAAATCAAAGCTGATAAT
TCAATGCGTCTACTCAAAGGAACCGATCCAAAAGTGGATAGCTATAGTGC
GTTCTGGGATAACAATCATACACACCAAACGAAGCTTTTCTCAGAACTGG
TCGATCGTGATATTACAGATATCGTTGTCTGTGGATTAGATGAAACTGGT
CGATATCAcaaaagcttttcaaaatgcAAGAAAGTATACCAAAGATATCA
ATGAAACAGATTGTCTGAATGCTATCCAGAAACTGAAGCTATCAAACTAC
AAGGATATTCCCAGTATCCCACTCAACAAGGTGAAAGAATTGTTTGTGCA
GCTTCTTGGAGATGGTTTTCATTTGGATGATACGAAATTTAAAGAAGTTC
AAGATTTTCTTTCCAATTGCACAttgAAGAAAATGGTCGACGAGCGACTA
TTAGCTAAGGTGCTGAGATATCTTCTTCGAAAGGATAGTACCAAAAAGGT
TGCACTTTTGATAGTGGAtgtacagaacgattttatcaGTGGTTCACTAG
CCTTGAAACATTCACCAGCCTGTGAGGATGGTGTTGATGTTGTACCCGTC
ATCAATCAAATGGttcaaatgaaatttcatttctttgtatATACAATGGA
TTGGCATCCACAAGATCATATCTCGTTTATCACCAATGTTTCAAGGAAAT
CAAAGCTGATAATTCAATGCGTCTACTCAAAGGAACCGATCCAAAAGTGG
ATAGCTATAGTGCGTTCTGGGATAACAATCATACACACCAAACGAAGCTT
TTCTCAGAACTGGTCGATCGTGATATTACAGATATCGTTGTCTGTGGATT
AGATGAAACTGGTCGATATCAcaaaagcttttcaaaatgcAAGAAAGTAT
ACCAAAGATATCAATGAAACAGATTGTCTGAATGCTATCCAGAAACTGAA
GCTATCAAACTACAAGGATATTCCCAGTATCCCACTCAACAAGGTGAAAG
AATTGTTTGTGCAGCTTCTTGGAGATGGTTTTCATTTGGATGATACGAAA
TTTAAAGAAGTTCAAGATTTTCTTTCCAATTGCACAttgAAGAAAATGGT
CGACGAGCGACTATTAGCTAAGGTGCTGAGATATCTTCTTCGAAAGGATA
GTACCAAAAAGGTTGCACTTTTGATAGTGGAtgtacagaacgattttatc
aGTGGTTCACTAGCCTTGAAACATTCACCAGCCTGTGAGGATGGTGTTGA
TGTTGTACCCGTCATCAATCAAATGGttcaaatgaaatttcatttctttg
tatATACAATGGATTGGCATCCACAAGATCATATCTCGTTTATCACCAAT
GTTTCAAGGAAATCAAAGCTGATAATTCAATGCGTCTACTCAAAGGAACC
GATCCAAAAGTGGATAGCTATAGTGCGTTCTGGGATAACAATCATACACA
CCAAACGAAGCTTTTCTCAGAACTGGTCGATCGTGATATTACAGATATCG
TTGTCTGTGGATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000069_pilon | genome | sc0000069_pilon:538665..547335 + |
|
