MSTRG.10545.1.p1 (mRNA) -

Overview
NameMSTRG.10545.1.p1
Unique NameMSTRG.10545.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000073_pilon:1123302..1126388-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10545.1.p1 ID=MSTRG.10545.1.p1|Name=MSTRG.10545.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3087bp|location=Sequence derived from alignment at sc0000073_pilon:1123302..1126388- (Clytia hemisphaerica_ch_hm2_pilon)
ATTAATGAAACAAAAAAAACTTCGAATTAGAAAAAAAGTTTACCCTCATA
AAGGATAAAATTTATATTTTTTCTTGATAATTGGGGGTAATAAAAACAAA
CAATGAGGATATTGTTATATTTCTTATTATTGGGACTGGCACTAGACCAC
GTGTACAGTTTTCCCATCGCACGTGGTGAGGAGAATGATGAACTTTTGGA
AGTGAGAATCAACGAAGAAGATGCAGGAGATGAATTGGAGAATGAAGAAG
AAACCACAGCCGAAGGTATGTCATCACTTTCCTGAGGTCAGTCATCTGAT
AAGCTTCCCCGATTATCTCTAAGCGACACCATTCAAAGATCCAGTTGAAA
TAATACAAACGAACCAAACTTCATTGGCTATTCTCCTTATTTCGCGTGAA
TAAAACCTTTGGAGAATTAAATGGCCAAAATGATGCGAAAATACCACTTC
GTAATCATTTTGTATTCGCTAAACCTCCCAGTATATCAGTAGTAATGCAA
GTATTTGTACAACCTTTGTTTCCCTTAGTCCTTAGTAGCAATATGAGCGG
TGATGGCTCAAGGTTCATAATGATGATTTTAAACCAATAGTCGGTATCTT
TAAAAATTCACGGTGTCATTCACAAACACCTGGTCTCATACACGTAGAAA
CTCATAAACATTTTATCCAATGCGTGATAAAGATTTATTGAAATTAAAGC
ATAATACTTGCGCGTTCTATTACTGCCTATAAGGTATAATTTTTCATTTT
TCTTTCTATAGAATCAGGGAGTGGAAGTGGCAGCAAAAGAAATTTGATCG
AAGAAGAAGTCAAAGAAGAAGATGAAGCTCCTGAAGGAGAGGTAAAATTT
TCTTCCGTAGTTAATTTCGAGCAGCATCCTCCTTCTAAGTCATGGTTTTT
GATTTGCTAAATAATTTAAGGTTGTTATCCCGTCTGTTATAATGATACCA
GGTAGAAGTATTTTAGAAACGCGTAGACATTGATTTTCAGAAGACATTTT
CCACCTAAACTGTTGGTATATGATGACGCTGACACGTCACAGGTTGTGAC
TAACTTCAATAGAGTATAGTTTCTTTGCATTTTGGTTAGACCTCATTATT
ATTAATCTGTAGAGCGACGAAGCAGTCGGCAAAGATGCCATCACGAAAGC
TGATGATATTCCCGACGAAGGCGACAACCAAGACGACGAAGCTGATGACA
ATCAAGAAAAAGAGAGTCAAGAAGAAAAAGAAGAATCTAAAAAGCCAGAA
GAAGAAGACAGTTCTTCAAAAACAGAACTGACCAAAAAAACTGAGGTCCC
TTCAATGGAAGGCGAAGAGGAGCCAGCAGAAAGCAGCGAAGAAGGAAACA
CTAGTGAAGAGGATGACGGAGCCAATGAAGAAAACCAGGACCAATCTGAC
GAAGAAGCGGAAGAGGGAGAAGATACGGGCAACAAACGATCTGATCTCTG
CAAAAGATCACCATACGGTGGTGGTTGCGGTGAAGAAGGTCACGAAGAGG
GACACGAAGAGGGACACGAAGGACACGGTCACCATCACGGTCATCATGAA
CACGAACATGGTCACCACCATCACGGACATCACCATGGTTTCGTGCATGA
ATGGGGAGAAGAAGAAGGAGGCGGTCACCACGGTCACCAAGGACACGGTC
ACCATGAAGGCCATCATGAACATGAGCACGAACACGAGCATGGATATGGT
GGTCACGAAGGAATTGGCCATCACGGAGGATATGGAGGCGGTGGCATGGG
AGGCGGCGGCGGTGGTTATGGAGATGGAGGATACGGTGGTGGTTATGGCG
GCGGCGGCGGCGGCGGTGGCTGCGGAGGTGGATGTGGCGGTGGATGGGGT
CGATCCAGTGTCTTACAACAAGCTCCACCCATGGCTTTCCATTGCAGAGA
TATGGTCAGTAAAGACGGTAAGAAACATACCAAACGTTTCTGTGTACCCA
TTGGTCATTATGGTGGTTATGGATGGCCTTATTTCCATGGTTACCCTGGC
ACTGGTCTTGGCCAATGGGGATGGGGATTCCCTTGGATCAAATCGAAAGT
TGAAGGATCCAAAGGGGTGAAAGCCAAAGATAGCAAAAAGGAGGAGAAAA
CCACTAAGAAAGAGCAACGTGATCATATCACCAAGAAACAAACCGTTCAT
GTTGGTTATGGATATGCCAGTGGAGATAACTACCGACTTGGATTCCAAAC
AGGTGGTATGGGAGGTCTTGCATCAACTTTCACGGGTCACTTAGGTCCAG
CAACTATCCCAGAACATTTCAAAAAATCTGTTATTAACAAACGTCAATTT
GGCTTCGGTGGCCCTGGTGCTGGACCCGCAGGCCCAGTCGGAGCAGGACC
AGTCGACGCACCAGGATATGGTGGCCACTCAACTCCATACGGTCATCCAG
TCACGCACCCTGGGTTTACTACTATGGGATTCCCAGGACACGCTCTTGCC
TCTACTGACGTCAGAAGTGGAATTCAAAGACCAAAACGAGAATTAGATGT
AGAGCAATATCCAGAAGCCGTCATCCCTGAAGATAACTTTGAAGTAGAAG
ACCCCGAAAAAGAATTCGCTAACTATCAATATTACGAACAACAACCAGTA
GAACACGAAGACAATGAAAATACCTTCTTATACACTGCTGAATAAACCAA
TCGGTGAGTACGCTACTGTCTTGTTATCACTCGCTTGTTCTCGTCTAAAA
AGAAAGAAAATGAGTTCTTGTTGTTCTCCACAGCACGTGACATTTACAGT
ATGATACAGTTCTTCCTCATTTTTTGACCTGATTATTTTCATTGTGTTCA
TAAATTCGAAGTGTCATTAACTTCAAAAGAAAATGATTCTTAAAATTGGG
AGTCTGAAAATTAAATCATGATTTTCTTTTTTTTCAGGCAACGCTTATCA
AAGAATACACCCAACACCACCCAGATAGTCACACATATCTTATAATTATA
TTTTTTAACAAATCTTAACTATTTTGTAATATCTGTAGTATAATAAAAAA
TTACAAATAAAATGAATTATGTCTGCTCTACGTCTTCTTTGCGTTCGATA
TATCATGGTCTCGAGTACGTCGAGTTTATCGTATTAG

Coding sequence (CDS) from alignment at sc0000073_pilon:1123302..1126388-

>MSTRG.10545.1.p1 ID=MSTRG.10545.1.p1|Name=MSTRG.10545.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5328bp|location=Sequence derived from alignment at sc0000073_pilon:1123302..1126388- (Clytia hemisphaerica_ch_hm2_pilon)
AGCGACGAAGCAGTCGGCAAAGATGCCATCACGAAAGCTGATGATATTCC
CGACGAAGGCGACAACCAAGACGACGAAGCTGATGACAATCAAGAAAAAG
AGAGTCAAGAAGAAAAAGAAGAATCTAAAAAGCCAGAAGAAGAAGACAGT
TCTTCAAAAACAGAACTGACCAAAAAAACTGAGGTCCCTTCAATGGAAGG
CGAAGAGGAGCCAGCAGAAAGCAGCGAAGAAGGAAACACTAGTGAAGAGG
ATGACGGAGCCAATGAAGAAAACCAGGACCAATCTGACGAAGAAGCGGAA
GAGGGAGAAGATACGGGCAACAAACGATCTGATCTCTGCAAAAGATCACC
ATACGGTGGTGGTTGCGGTGAAGAAGGTCACGAAGAGGGACACGAAGAGG
GACACGAAGGACACGGTCACCATCACGGTCATCATGAACACGAACATGGT
CACCACCATCACGGACATCACCATGGTTTCGTGCATGAATGGGGAGAAGA
AGAAGGAGGCGGTCACCACGGTCACCAAGGACACGGTCACCATGAAGGCC
ATCATGAACATGAGCACGAACACGAGCATGGATATGGTGGTCACGAAGGA
ATTGGCCATCACGGAGGATATGGAGGCGGTGGCATGGGAGGCGGCGGCGG
TGGTTATGGAGATGGAGGATACGGTGGTGGTTATGGCGGCGGCGGCGGCG
GCGGTGGCTGCGGAGGTGGATGTGGCGGTGGATGGGGTCGATCCAGTGTC
TTACAACAAGCTCCACCCATGGCTTTCCATTGCAGAGATATGGTCAGTAA
AGACGGTAAGAAACATACCAAACGTTTCTGTGTACCCATTGGTCATTATG
GTGGTTATGGATGGCCTTATTTCCATGGTTACCCTGGCACTGGTCTTGGC
CAATGGGGATGGGGATTCCCTTGGATCAAATCGAAAGTTGAAGGATCCAA
AGGGGTGAAAGCCAAAGATAGCAAAAAGGAGGAGAAAACCACTAAGAAAG
AGCAACGTGATCATATCACCAAGAAACAAACCGTTCATGTTGGTTATGGA
TATGCCAGTGGAGATAACTACCGACTTGGATTCCAAACAGGTGGTATGGG
AGGTCTTGCATCAACTTTCACGGGTCACTTAGGTCCAGCAACTATCCCAG
AACATTTCAAAAAATCTGTTATTAACAAACGTCAATTTGGCTTCGGTGGC
CCTGGTGCTGGACCCGCAGGCCCAGTCGGAGCAGGACCAGTCGACGCACC
AGGATATGGTGGCCACTCAACTCCATACGGTCATCCAGTCACGCACCCTG
GGTTTACTACTATGGGATTCCCAGGACACGCTCTTGCCTCTACTGACGTC
AGAAGTGGAATTCAAAGACCAAAACGAGAATTAGATGTAGAGCAATATCC
AGAAGCCGTCATCCCTGAAGATAACTTTGAAGTAGAAGACCCCGAAAAAG
AATTCGCTAACTATCAATATTACGAACAACAACCAGTAGAACACGAAGAC
AATGAAAATACCTTCTTATACACTGCTGAATAAAATCAGGGAGTGGAAGT
GGCAGCAAAAGAAATTTGATCGAAGAAGAAGTCAAAGAAGAAGATGAAGC
TCCTGAAGGAGAGATGAGGATATTGTTATATTTCTTATTATTGGGACTGG
CACTAGACCACGTGTACAGTTTTCCCATCGCACGTGGTGAGGAGAATGAT
GAACTTTTGGAAGTGAGAATCAACGAAGAAGATGCAGGAGATGAATTGGA
GAATGAAGAAGAAACCACAGCCGAAGAGCGACGAAGCAGTCGGCAAAGAT
GCCATCACGAAAGCTGATGATATTCCCGACGAAGGCGACAACCAAGACGA
CGAAGCTGATGACAATCAAGAAAAAGAGAGTCAAGAAGAAAAAGAAGAAT
CTAAAAAGCCAGAAGAAGAAGACAGTTCTTCAAAAACAGAACTGACCAAA
AAAACTGAGGTCCCTTCAATGGAAGGCGAAGAGGAGCCAGCAGAAAGCAG
CGAAGAAGGAAACACTAGTGAAGAGGATGACGGAGCCAATGAAGAAAACC
AGGACCAATCTGACGAAGAAGCGGAAGAGGGAGAAGATACGGGCAACAAA
CGATCTGATCTCTGCAAAAGATCACCATACGGTGGTGGTTGCGGTGAAGA
AGGTCACGAAGAGGGACACGAAGAGGGACACGAAGGACACGGTCACCATC
ACGGTCATCATGAACACGAACATGGTCACCACCATCACGGACATCACCAT
GGTTTCGTGCATGAATGGGGAGAAGAAGAAGGAGGCGGTCACCACGGTCA
CCAAGGACACGGTCACCATGAAGGCCATCATGAACATGAGCACGAACACG
AGCATGGATATGGTGGTCACGAAGGAATTGGCCATCACGGAGGATATGGA
GGCGGTGGCATGGGAGGCGGCGGCGGTGGTTATGGAGATGGAGGATACGG
TGGTGGTTATGGCGGCGGCGGCGGCGGCGGTGGCTGCGGAGGTGGATGTG
GCGGTGGATGGGGTCGATCCAGTGTCTTACAACAAGCTCCACCCATGGCT
TTCCATTGCAGAGATATGGTCAGTAAAGACGGTAAGAAACATACCAAACG
TTTCTGTGTACCCATTGGTCATTATGGTGGTTATGGATGGCCTTATTTCC
ATGGTTACCCTGGCACTGGTCTTGGCCAATGGGGATGGGGATTCCCTTGG
ATCAAATCGAAAGTTGAAGGATCCAAAGGGGTGAAAGCCAAAGATAGCAA
AAAGGAGGAGAAAACCACTAAGAAAGAGCAACGTGATCATATCACCAAGA
AACAAACCGTTCATGTTGGTTATGGATATGCCAGTGGAGATAACTACCGA
CTTGGATTCCAAACAGGTGGTATGGGAGGTCTTGCATCAACTTTCACGGG
TCACTTAGGTCCAGCAACTATCCCAGAACATTTCAAAAAATCTGTTATTA
ACAAACGTCAATTTGGCTTCGGTGGCCCTGGTGCTGGACCCGCAGGCCCA
GTCGGAGCAGGACCAGTCGACGCACCAGGATATGGTGGCCACTCAACTCC
ATACGGTCATCCAGTCACGCACCCTGGGTTTACTACTATGGGATTCCCAG
GACACGCTCTTGCCTCTACTGACGTCAGAAGTGGAATTCAAAGACCAAAA
CGAGAATTAGATGTAGAGCAATATCCAGAAGCCGTCATCCCTGAAGATAA
CTTTGAAGTAGAAGACCCCGAAAAAGAATTCGCTAACTATCAATATTACG
AACAACAACCAGTAGAACACGAAGACAATGAAAATACCTTCTTATACACT
GCTGAATAAAATCAGGGAGTGGAAGTGGCAGCAAAAGAAATTTGATCGAA
GAAGAAGTCAAAGAAGAAGATGAAGCTCCTGAAGGAGAGATGAGGATATT
GTTATATTTCTTATTATTGGGACTGGCACTAGACCACGTGTACAGTTTTC
CCATCGCACGTGGTGAGGAGAATGATGAACTTTTGGAAGTGAGAATCAAC
GAAGAAGATGCAGGAGATGAATTGGAGAATGAAGAAGAAACCACAGCCGA
AGAGCGACGAAGCAGTCGGCAAAGATGCCATCACGAAAGCTGATGATATT
CCCGACGAAGGCGACAACCAAGACGACGAAGCTGATGACAATCAAGAAAA
AGAGAGTCAAGAAGAAAAAGAAGAATCTAAAAAGCCAGAAGAAGAAGACA
GTTCTTCAAAAACAGAACTGACCAAAAAAACTGAGGTCCCTTCAATGGAA
GGCGAAGAGGAGCCAGCAGAAAGCAGCGAAGAAGGAAACACTAGTGAAGA
GGATGACGGAGCCAATGAAGAAAACCAGGACCAATCTGACGAAGAAGCGG
AAGAGGGAGAAGATACGGGCAACAAACGATCTGATCTCTGCAAAAGATCA
CCATACGGTGGTGGTTGCGGTGAAGAAGGTCACGAAGAGGGACACGAAGA
GGGACACGAAGGACACGGTCACCATCACGGTCATCATGAACACGAACATG
GTCACCACCATCACGGACATCACCATGGTTTCGTGCATGAATGGGGAGAA
GAAGAAGGAGGCGGTCACCACGGTCACCAAGGACACGGTCACCATGAAGG
CCATCATGAACATGAGCACGAACACGAGCATGGATATGGTGGTCACGAAG
GAATTGGCCATCACGGAGGATATGGAGGCGGTGGCATGGGAGGCGGCGGC
GGTGGTTATGGAGATGGAGGATACGGTGGTGGTTATGGCGGCGGCGGCGG
CGGCGGTGGCTGCGGAGGTGGATGTGGCGGTGGATGGGGTCGATCCAGTG
TCTTACAACAAGCTCCACCCATGGCTTTCCATTGCAGAGATATGGTCAGT
AAAGACGGTAAGAAACATACCAAACGTTTCTGTGTACCCATTGGTCATTA
TGGTGGTTATGGATGGCCTTATTTCCATGGTTACCCTGGCACTGGTCTTG
GCCAATGGGGATGGGGATTCCCTTGGATCAAATCGAAAGTTGAAGGATCC
AAAGGGGTGAAAGCCAAAGATAGCAAAAAGGAGGAGAAAACCACTAAGAA
AGAGCAACGTGATCATATCACCAAGAAACAAACCGTTCATGTTGGTTATG
GATATGCCAGTGGAGATAACTACCGACTTGGATTCCAAACAGGTGGTATG
GGAGGTCTTGCATCAACTTTCACGGGTCACTTAGGTCCAGCAACTATCCC
AGAACATTTCAAAAAATCTGTTATTAACAAACGTCAATTTGGCTTCGGTG
GCCCTGGTGCTGGACCCGCAGGCCCAGTCGGAGCAGGACCAGTCGACGCA
CCAGGATATGGTGGCCACTCAACTCCATACGGTCATCCAGTCACGCACCC
TGGGTTTACTACTATGGGATTCCCAGGACACGCTCTTGCCTCTACTGACG
TCAGAAGTGGAATTCAAAGACCAAAACGAGAATTAGATGTAGAGCAATAT
CCAGAAGCCGTCATCCCTGAAGATAACTTTGAAGTAGAAGACCCCGAAAA
AGAATTCGCTAACTATCAATATTACGAACAACAACCAGTAGAACACGAAG
ACAATGAAAATACCTTCTTATACACTGCTGAATAAAATCAGGGAGTGGAA
GTGGCAGCAAAAGAAATTTGATCGAAGAAGAAGTCAAAGAAGAAGATGAA
GCTCCTGAAGGAGAGATGAGGATATTGTTATATTTCTTATTATTGGGACT
GGCACTAGACCACGTGTACAGTTTTCCCATCGCACGTGGTGAGGAGAATG
ATGAACTTTTGGAAGTGAGAATCAACGAAGAAGATGCAGGAGATGAATTG
GAGAATGAAGAAGAAACCACAGCCGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10545MSTRG.10545Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10545.1.p1MSTRG.10545.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10545.1.p1.exon4MSTRG.10545.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10545.1.p1.exon3MSTRG.10545.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10545.1.p1.exon2MSTRG.10545.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10545.1.p1.exon1MSTRG.10545.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073_pilongenomesc0000073_pilon:1123302..1126388 -