MSTRG.11779.1.p1 (mRNA) -

Overview
NameMSTRG.11779.1.p1
Unique NameMSTRG.11779.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000086_pilon:902978..904631-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11779.1.p1 ID=MSTRG.11779.1.p1|Name=MSTRG.11779.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1654bp|location=Sequence derived from alignment at sc0000086_pilon:902978..904631- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTTTGCTCTTTCACAATGTCCTTCAAGTTAGCTTAGAAAAATCAGTT GAGTAAGAAATCATTAATTTCTTTGTTATAGAATCCAAGCACTCCTCGTC TTGTTGGCTTTGCTGTTCTTGACTCCTCAAGAGACCCACATTTCAGTTTC AGTCTACACTTAGCAGCTTATGATAACATACAAATGATAACGCCCCTAAC AACACAAATGACACCCATCTCAACACCCATTGGTCCACCCTCTCCGCCGG AAACACCTTCTCCTCCGGAAACACCCTCTCCTCCGAAAACACCCTCACCT ACCGAGACACCTTCCCCACCGGAAACACCTCCGCCTCCTCCTCAAACCCA AACACCCCCTCCTCGAGAAACCATGCCACCTCCAAAACTACCGATTGAGG TCATCTCACAGCCCGAACTCTCTGTTCCTGCCTTACCACAACCAGAACCT TCAACTACCTCCCCTCCAGATGTAAGCCCAGTTGTTGATACAGAAGAAGG TGGGGCCCCCTTCACAGGAGGGATCGCACAGCCGTACGAGGCAATGAAAG ATCTTGTAGAAGGAGATCAGACAGAGAAACAAAGATACGAAAGAAACAAA GGAGTTGCCAAAGGAGGAGAGAGTAGCATCCGGTCACCACCCACTGAAAC ACAACAAAATGAAACACAGCAAAATGAAACACAGCAAAATGATATGCAAC AAAATGCAGAAGAACCACAAGAAGGAGGAGAGCCAGAAGAAGGAGAAGTA GAAAATGAAAATGGAGGACAACAGCAAAATTCAAAAAGTGACGAGGAAGC GAAACGTCGAAGGATCAAAAGTAGAAAAAGCAAAAGACGAGGAAAGAAAA AGGTCTTCAAAGTAGGAAAGAAAAGCATTAGGTCATCATTTACTGGAGAC CAACAAGACGATCAAACAACTGGAGGAGACCAAACAACCGGAGAAGACCA AGCAACCGAAGGAGACCTAACAAACGGAGGAGAACAAGCAACCGAAGGAG ACCAAACAAACGGAGGAGAACAAGCAACCGAAGGAGACCAAAAAACCGGA GAAGACCCACCAATCGAAGGAGACCAAACAACCGGAGGAGAACAAGCAAC CGGAGGAAATCAAGCAACCGAAGGAAACCAAACAACCGAAGGAGACCAAC AAGACGGAGGAGACACAGCAACCAGAGGAGAACAGTCAACTGAAGAGAAA TCGGCCGACCAGCAAGGAGGAGAACAACAAAATGACGAAGAAGCGAAACG TCGGAGAATCAAAGAAAGAGAGAGCAAGAGAAAAGGAAAGAAAATAAAAG GGAACAAAAGAAAAGAACAAAGAAAGCAATGAGAAATGGATAGTCATTAT CTCACGTTCCATCCTTAAACATATAATTCAGAATATCTTTATAAAATTTA AATTTATCAAAAATAGTACTGAAATTATAATTTATCAATTAAAATTGATA TTTCTATAGATGAAAAGGACAAAAAAGTTTGTAGTTCATTTTTTAATCAT TTTTCAGCCAGGGGTGAAACAAAAAGTCATGAAAATGACCTAGGCCCTTT CATTTAAAATTTTATTTTATATATTGTGCTCCGAATGTTACTCGTTTTAA AGAATAATATAGTATTTACCAGATTGGGATTAAAATTTTTTAGTTTGACT GTGT

Coding sequence (CDS) from alignment at sc0000086_pilon:902978..904631-

>MSTRG.11779.1.p1 ID=MSTRG.11779.1.p1|Name=MSTRG.11779.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1149bp|location=Sequence derived from alignment at sc0000086_pilon:902978..904631- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATAACGCCCCTAACAACACAAATGACACCCATCTCAACACCCATTGG
TCCACCCTCTCCGCCGGAAACACCTTCTCCTCCGGAAACACCCTCTCCTC
CGAAAACACCCTCACCTACCGAGACACCTTCCCCACCGGAAACACCTCCG
CCTCCTCCTCAAACCCAAACACCCCCTCCTCGAGAAACCATGCCACCTCC
AAAACTACCGATTGAGGTCATCTCACAGCCCGAACTCTCTGTTCCTGCCT
TACCACAACCAGAACCTTCAACTACCTCCCCTCCAGATGTAAGCCCAGTT
GTTGATACAGAAGAAGGTGGGGCCCCCTTCACAGGAGGGATCGCACAGCC
GTACGAGGCAATGAAAGATCTTGTAGAAGGAGATCAGACAGAGAAACAAA
GATACGAAAGAAACAAAGGAGTTGCCAAAGGAGGAGAGAGTAGCATCCGG
TCACCACCCACTGAAACACAACAAAATGAAACACAGCAAAATGAAACACA
GCAAAATGATATGCAACAAAATGCAGAAGAACCACAAGAAGGAGGAGAGC
CAGAAGAAGGAGAAGTAGAAAATGAAAATGGAGGACAACAGCAAAATTCA
AAAAGTGACGAGGAAGCGAAACGTCGAAGGATCAAAAGTAGAAAAAGCAA
AAGACGAGGAAAGAAAAAGGTCTTCAAAGTAGGAAAGAAAAGCATTAGGT
CATCATTTACTGGAGACCAACAAGACGATCAAACAACTGGAGGAGACCAA
ACAACCGGAGAAGACCAAGCAACCGAAGGAGACCTAACAAACGGAGGAGA
ACAAGCAACCGAAGGAGACCAAACAAACGGAGGAGAACAAGCAACCGAAG
GAGACCAAAAAACCGGAGAAGACCCACCAATCGAAGGAGACCAAACAACC
GGAGGAGAACAAGCAACCGGAGGAAATCAAGCAACCGAAGGAAACCAAAC
AACCGAAGGAGACCAACAAGACGGAGGAGACACAGCAACCAGAGGAGAAC
AGTCAACTGAAGAGAAATCGGCCGACCAGCAAGGAGGAGAACAACAAAAT
GACGAAGAAGCGAAACGTCGGAGAATCAAAGAAAGAGAGAGCAAGAGAAA
AGGAAAGAAAATAAAAGGGAACAAAAGAAAAGAACAAAGAAAGCAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11779MSTRG.11779Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11779.1.p1.exon1MSTRG.11779.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11779.1.p1MSTRG.11779.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086_pilongenomesc0000086_pilon:902978..904631 -