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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:1049836..1054920+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11498.4.p1 ID=MSTRG.11498.4.p1|Name=MSTRG.11498.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5085bp|location=Sequence derived from alignment at sc0000083_pilon:1049836..1054920+ (Clytia hemisphaerica_ch_hm2_pilon)
TATCTCACAACGTTTAAAGAACGTTCTGGGCCAGCTTCAGGTATACTCTG
CTTAAAAATCCACCTTTCCTTATTGTGTTTTTATGacatttcattttcac
ttttaggACAATGCATGGCCTCACCACTTCTCTTTGGGAGGTCATCTCCT
GGAAATCAAAATCTCAATATGACACAGCTGGCGATCAATACACTCGTATC
TTCATGCCAAAACTGTTCATCATTTCGTCTCTTATAATGGCTTTCAGCTA
CTTCAATGATAAACTAAACTGCATGGTTTCATCAAGGCTCAATGGATTGA
AGGAGTTTGTTCAAGAGACCTGTTGGATTCAAGGATTTTACATTTACCAT
GAAATGCACACAAAATTGAACGAGTCTTCGTATTACGGAATTCCTGAATA
TACAGGTTATAATGGAATTACAAAAGACGGTAAGGAACGACAAATACACT
TTAGTGTTCACAGGTTCTAAAGagcatttgaaatttcttccagAAAACCC
CCCTCCCCTTTAGAATAAAGTCACTCGTTGAGaaaaaaaaCCATCTTCTC
GGTAACCAAAGATTATATTTGTAATTTGAGCTAAGATATGATAGATATTA
ACATTTGTAATAATGGTAGATGCTCTAAGTAAATCCATTCACACATAAAT
ATTACGTTTAAGGCACTGAAAAGGCTAGAGAGAAATCATCAGCCTCTCAA
TcaagaaaaagtaagaaaaatgcgTCACATTTAGGATgacctttctttgt
ttttaagcgacatatttttgaaatctcctatggatttactttcaatctgt
cGTTTGTGTGAAAGCGAAGTGGGTCAACAAGTAGCCAGTGCCTTACCGCA
AACcaattgttttctttgttttatggtcagttacACTTTGAAGAATTTGT
CGAAAGTTATCGCACTGCGGTGGAGGCCGTCGTCGGTTCAGTGGTAAGGC
ACTGACTACTTGTTGGCCCGCTTGGCTTTCACACAAACACGGAAAACATG
AAACTCGGAAATAaaagggggggtttcatggttggcggaggagcggaatc
ggcccttttttcggacggagtggcggaatttggcgaaaatttagacggaa
ttacggaaattggatTCTCTGACGGAggcggaaaattagacaattttagt
gcggaaaaacggaatttagcaaaaaaaattgcggaatttcagaatcggta
aaaaatattcaaaatttgcggaattttcgacaaaaatattgaatttcaaa
ggaatttacggtgacggaattttggttcaatttaagacggtatgacggaa
attggagaaaaaattggcggaattgcggaatcgggtaccccctgaacccc
cccatAAAAGACTGGAATGGACAATCGAATAGGATTTTTTCTAAAAGGCT
GGCCAacaagtggcttcatttcccatccagtaGTTACACACCTATCAAAA
ACGCTCAAAGCGTGAGGAGACTGGGTTAGAATTTACCAGGGGGAGGATTG
ACATCAAACTGATTGTTGCGGTGATTTTAATACAAACAAAGAGTTTCGTC
ATCTCTTCTATCATTAAACTCAAACCCAGTTTTCGCGCGCTTCAGAGGGT
TTATACACAGATatttaagcccgaagggctagataggcaactttaagctt
tctccagcaaaaaaaagtgaagcaaaaatttgactttttaaatttcgtgc
cgatggataggatctagcattttaattgttttcggagcgcgagatcaaaa
aacgtaggcggcaaacgctatttcacatctctcaaaccggtgaaattgca
tattttagtcacgtgactctggtaggaaatccttccaaagatgagcttca
ctttttgataaaagctgcaaatctagcccttcgggctttacagatatctg
tgggttTATAGTGGTCTTGCAGACTAGAATCGGTTTAATACggtaatatg
ggtgttatataATAATACGATagttgttacgggataatagcACCAGTTTG
TCTAAAATACAATTTGTCCCTTCCATtattctttgtttgtttgttttgca
gCGAACGTTCTCGTTTCCTCAAACAGGTCAATTATGCTCAACTATCAACC
GTGCAGGAGGAGTCCATACCAAATGTGCACCAATGACTAAAAGGTATCAA
CATATTGTGGTGGATAATTTGAGACATTCTACAATCAAATAAATATCAAA
CCGTGAAGacaaggtctttttttaatacaagatcttgtatCAAAACGCTC
GCAAAGTAGATATATTTCAGCGTTTGGCTTAGATGGGGTTTCGGATTATG
TCTGATTTGCTTTTTCGGATCAACTCTTTATTTCCGTTACAACAATTCTT
ATTTGAAATAGAACGTCAGAACGTTTCCATTGAACTGTCGAAAATTTGAC
GCGATTCGTGTAGAAAGAGTCTTTGTAGACTAGAACTCAAAATTCAGCGG
TCGTTGAAGGCTTACAAACGAAGAAAACAATATCTCGAAAAGGAAGAGCC
TATAAAGTAACGAGTAATCACAAgaaattttcttcacttttttctttaga
tatTTCTTACATTATCAATGGGTGCCTTTTTACGTGGTTAGTTTGGCTAT
CCTATACTACGTTCCATATCTAATCTTCAAGTCGGTCAACTCAGATCTCA
TCTCACTGGTGGATACAGTGGAAACCGGCAATCTACGAGATGTGGATAAG
ATTGCCAACAACTACTTTAACTATCGCATCAATTCTAAAGTCAAGATGAA
GATCATTGTTTGGGTAAACCTTATGATTAAGGTATTGTTTACGAAAAGCC
TCACTTTGTCTTAGTGTATCCTAGGTTTTGTTACGTTACTGATAGTCGCA
TGAGGGTATCTATGGTACCCCAGTAAACATCAATGGTACGAGGTTGCTTT
TGATAACATGAAAATTGAGTTTTATTTCCTTTATTAACTGGAGCACACTT
AATCACAGTAACCAAAACTTATGCCtggtttgaaaatgattttacttCAT
CACGCAGCAAGGGCAGCGATTTCATGATATTACTAAGACAGTTACTGGGC
AGTTACAACGGAGGCCAGAAAGGAATTTACGAGGAAAAGTTTTATTATTA
TCTTATAGAAAGATGGTCCCTAGAGCCTCCTCGACGTGTAAAAATGGGTA
TGGTACATGGCTCATTAGTGATTGTCACATGCAAGCCCATAGGatgcatt
ttcattttgagggggCAAAGTGAGAAATATAAGCCGAGGGCGAtgccatg
gtttggcccgagagAGAAAATTTCGCAATTTAAGGTTGCTGGGAAACGCA
TCTAATTAAAGGATTATGTTCAAAATGAAGCCAATAatacaagatttttc
aaagctaccaacttttggaaaaatctttgggGGCAGATGCCCCTGTgctc
cctcccccccccccggttgctACGGGCCTGACATGTAATCTTATTGTTCA
GGTTATTTTCATTGTCGTTAACATCTCTGGCTTCTTATTGACCGATTACA
CAATGGATGGACGATTTATCGATTATGGTCTTAACTGGATCAGTTGGAAT
GATGTACCCAACCATATTGCTCATGACATTGTGAAAAGAGGAACACCAAA
ACCTGGCGATCATTTCTTGCCATCTGTCGGAATGTGTGATATCCACGAAG
CGCTGAATGACAAACGTGGTATTTACATCGATAAGTAAGTGCCCTTAGAA
AATTCTCATCATGAAATGTTGAAGTTTTATGCTAATTTGACAATAAGCTT
TGTTTCTTATACAAAATAAAGATCATCATTGGatgtacaaacttttgcga
gcagaaactttcgcgaggtcaaaaaatcgcgaaattcacgacatttactt
tcgcgaatttgaggaaaaaatgtttttcgcgaccataaaattttgcaaat
cgttggataaaaatgagaattttcgaatgaaaattACCTTAACAGtgaaa
atattccttaaatccgaTAAGGACAGTTGCTCTTGGACATAGGATTAAAG
AAAGACATTAAAGGTTAATAATGTaccgaaaatttgatatttattacgat
ttcgtggttttatagatttcaaacgtttttgagaatttttcgcgagcata
aactttcacgaattgccctgtcaagaattttcaaagacatttacttttgc
gagAAAGGCGAAAATTCGCAAAaagcgaaagtttctgctcgcgaaagttt
gtacgcctaaagtatctttttttatttcagacacAAAGTGATCTGTGAAA
TCAGCCAAAACATTCGATACCAATACAATTTTATCATTCTATGGTTCTTC
TTTGCTTCTGGTTTGGTCATCTCATCATTTGGTCTTctccattcaatttt
caaacttctcAAATCAATGTTTTGGGTTTACTCACCAAAGTTGTTCGACC
ATGAAACATCACTATCTAATCGCGTTCATTCTCAACTCACACTCAGAGAG
ATGGAATATCTTGATAAGATTCGTCAGATGGATATGACAATGTACGGCGA
GATTCTCCGGGAATTGACAAGATATAAACCAAGTATTGGCTCTATTAAGA
AGTTTGCACCTCAAACTACATCTGAGATGATTACATTGCTACCATCAGCA
CCAAAAGAAATACAAAATCATTGGGATAGACTTGTTTGATTCCAATCTTC
GTTCGGTCTTGAATGGAATCTTTGACTATTTGGTGAATAGAGTAGGATAC
AGAACGGCTACACTAAGCTTACACTAAACATCAAAGAAATGCCCTTTAAT
TAATGTTACAAAACATCTATCTAGTGTTAGATAGAGGTTGAAACGTCAGC
CGAACAAGTCAGTAGTCAAAACACATCCAGTCCACAACACTTCATCGAAA
TGGCAAGAACTGCCATCACGAGAATTAGTTCTCCAAAAGGAAGGTGTTGT
TGTTCCGAAACAGGAAAGAAAAATGGAATTAGGAGGCGGTACCTGGTGTA
TTTCCTAACTATCTGTTGAATGttatttatttatcttttaTCCATGAGCA
TTTCCGGAGTTCACAATACCTACCGTCATTTCTCTAATTTATCGCGTCCT
CTAATTCATACGGATCAAAttggtttgaaaaattt Coding sequence (CDS) from alignment at sc0000083_pilon:1049836..1054920+ >MSTRG.11498.4.p1 ID=MSTRG.11498.4.p1|Name=MSTRG.11498.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6210bp|location=Sequence derived from alignment at sc0000083_pilon:1049836..1054920+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATGGCCTCACCACTTCTCTTTGGGAGGTCATCTCCTGGAAATCAAA
ATCTCAATATGACACAGCTGGCGATCAATACACTCGTATCTTCATGCCAA
AACTGTTCATCATTTCGTCTCTTATAATGGCTTTCAGCTACTTCAATGAT
AAACTAAACTGCATGGTTTCATCAAGGCTCAATGGATTGAAGGAGTTTGT
TCAAGAGACCTGTTGGATTCAAGGATTTTACATTTACCATGAAATGCACA
CAAAATTGAACGAGTCTTCGTATTACGGAATTCCTGAATATACAGGTTAT
AATGGAATTACAAAAGACGGTCAATTATGCTCAACTATCAACCGTGCAGG
AGGAGTCCATACCAAATGTGCACCAATGACTAAAAGatatTTCTTACATT
ATCAATGGGTGCCTTTTTACGTGGTTAGTTTGGCTATCCTATACTACGTT
CCATATCTAATCTTCAAGTCGGTCAACTCAGATCTCATCTCACTGGTGGA
TACAGTGGAAACCGGCAATCTACGAGATGTGGATAAGATTGCCAACAACT
ACTTTAACTATCGCATCAATTCTAAAGTCAAGATGAAGATCATTGTTTGG
GTTATTTTCATTGTCGTTAACATCTCTGGCTTCTTATTGACCGATTACAC
AATGGATGGACGATTTATCGATTATGGTCTTAACTGGATCAGTTGGAATG
ATGTACCCAACCATATTGCTCATGACATTGTGAAAAGAGGAACACCAAAA
CCTGGCGATCATTTCTTGCCATCTGTCGGAATGTGTGATATCCACGAAGC
GCTGAATGACAAACGTGGTATTTACATCGATAAacacAAAGTGATCTGTG
AAATCAGCCAAAACATTCGATACCAATACAATTTTATCATTCTATGGTTC
TTCTTTGCTTCTGGTTTGGTCATCTCATCATTTGGTCTTctccattcaat
tttcaaacttctcAAATCAATGTTTTGGGTTTACTCACCAAAGTTGTTCG
ACCATGAAACATCACTATCTAATCGCGTTCATTCTCAACTCACACTCAGA
GAGATGGAATATCTTGATAAGATTCGTCAGATGGATATGACAATGTACGG
CGAGATTCTCCGGGAATTGACAAGATATAAACCAAGTATTGGCTCTATTA
AGAAGTTTGCACCTCAAACTACATCTGAGATGATTACATTGCTACCATCA
GCACCAAAAGAAATACAAAATCATTGGGATAGACTTGTTTGAATGCATGG
CCTCACCACTTCTCTTTGGGAGGTCATCTCCTGGAAATCAAAATCTCAAT
ATGACACAGCTGGCGATCAATACACTCGTATCTTCATGCCAAAACTGTTC
ATCATTTCGTCTCTTATAATGGCTTTCAGCTACTTCAATGATAAACTAAA
CTGCATGGTTTCATCAAGGCTCAATGGATTGAAGGAGTTTGTTCAAGAGA
CCTGTTGGATTCAAGGATTTTACATTTACCATGAAATGCACACAAAATTG
AACGAGTCTTCGTATTACGGAATTCCTGAATATACAGGTTATAATGGAAT
TACAAAAGACGGTCAATTATGCTCAACTATCAACCGTGCAGGAGGAGTCC
ATACCAAATGTGCACCAATGACTAAAAGatatTTCTTACATTATCAATGG
GTGCCTTTTTACGTGGTTAGTTTGGCTATCCTATACTACGTTCCATATCT
AATCTTCAAGTCGGTCAACTCAGATCTCATCTCACTGGTGGATACAGTGG
AAACCGGCAATCTACGAGATGTGGATAAGATTGCCAACAACTACTTTAAC
TATCGCATCAATTCTAAAGTCAAGATGAAGATCATTGTTTGGGTTATTTT
CATTGTCGTTAACATCTCTGGCTTCTTATTGACCGATTACACAATGGATG
GACGATTTATCGATTATGGTCTTAACTGGATCAGTTGGAATGATGTACCC
AACCATATTGCTCATGACATTGTGAAAAGAGGAACACCAAAACCTGGCGA
TCATTTCTTGCCATCTGTCGGAATGTGTGATATCCACGAAGCGCTGAATG
ACAAACGTGGTATTTACATCGATAAacacAAAGTGATCTGTGAAATCAGC
CAAAACATTCGATACCAATACAATTTTATCATTCTATGGTTCTTCTTTGC
TTCTGGTTTGGTCATCTCATCATTTGGTCTTctccattcaattttcaaac
ttctcAAATCAATGTTTTGGGTTTACTCACCAAAGTTGTTCGACCATGAA
ACATCACTATCTAATCGCGTTCATTCTCAACTCACACTCAGAGAGATGGA
ATATCTTGATAAGATTCGTCAGATGGATATGACAATGTACGGCGAGATTC
TCCGGGAATTGACAAGATATAAACCAAGTATTGGCTCTATTAAGAAGTTT
GCACCTCAAACTACATCTGAGATGATTACATTGCTACCATCAGCACCAAA
AGAAATACAAAATCATTGGGATAGACTTGTTTGAATGCATGGCCTCACCA
CTTCTCTTTGGGAGGTCATCTCCTGGAAATCAAAATCTCAATATGACACA
GCTGGCGATCAATACACTCGTATCTTCATGCCAAAACTGTTCATCATTTC
GTCTCTTATAATGGCTTTCAGCTACTTCAATGATAAACTAAACTGCATGG
TTTCATCAAGGCTCAATGGATTGAAGGAGTTTGTTCAAGAGACCTGTTGG
ATTCAAGGATTTTACATTTACCATGAAATGCACACAAAATTGAACGAGTC
TTCGTATTACGGAATTCCTGAATATACAGGTTATAATGGAATTACAAAAG
ACGGTCAATTATGCTCAACTATCAACCGTGCAGGAGGAGTCCATACCAAA
TGTGCACCAATGACTAAAAGatatTTCTTACATTATCAATGGGTGCCTTT
TTACGTGGTTAGTTTGGCTATCCTATACTACGTTCCATATCTAATCTTCA
AGTCGGTCAACTCAGATCTCATCTCACTGGTGGATACAGTGGAAACCGGC
AATCTACGAGATGTGGATAAGATTGCCAACAACTACTTTAACTATCGCAT
CAATTCTAAAGTCAAGATGAAGATCATTGTTTGGGTTATTTTCATTGTCG
TTAACATCTCTGGCTTCTTATTGACCGATTACACAATGGATGGACGATTT
ATCGATTATGGTCTTAACTGGATCAGTTGGAATGATGTACCCAACCATAT
TGCTCATGACATTGTGAAAAGAGGAACACCAAAACCTGGCGATCATTTCT
TGCCATCTGTCGGAATGTGTGATATCCACGAAGCGCTGAATGACAAACGT
GGTATTTACATCGATAAacacAAAGTGATCTGTGAAATCAGCCAAAACAT
TCGATACCAATACAATTTTATCATTCTATGGTTCTTCTTTGCTTCTGGTT
TGGTCATCTCATCATTTGGTCTTctccattcaattttcaaacttctcAAA
TCAATGTTTTGGGTTTACTCACCAAAGTTGTTCGACCATGAAACATCACT
ATCTAATCGCGTTCATTCTCAACTCACACTCAGAGAGATGGAATATCTTG
ATAAGATTCGTCAGATGGATATGACAATGTACGGCGAGATTCTCCGGGAA
TTGACAAGATATAAACCAAGTATTGGCTCTATTAAGAAGTTTGCACCTCA
AACTACATCTGAGATGATTACATTGCTACCATCAGCACCAAAAGAAATAC
AAAATCATTGGGATAGACTTGTTTGAATGCATGGCCTCACCACTTCTCTT
TGGGAGGTCATCTCCTGGAAATCAAAATCTCAATATGACACAGCTGGCGA
TCAATACACTCGTATCTTCATGCCAAAACTGTTCATCATTTCGTCTCTTA
TAATGGCTTTCAGCTACTTCAATGATAAACTAAACTGCATGGTTTCATCA
AGGCTCAATGGATTGAAGGAGTTTGTTCAAGAGACCTGTTGGATTCAAGG
ATTTTACATTTACCATGAAATGCACACAAAATTGAACGAGTCTTCGTATT
ACGGAATTCCTGAATATACAGGTTATAATGGAATTACAAAAGACGGTCAA
TTATGCTCAACTATCAACCGTGCAGGAGGAGTCCATACCAAATGTGCACC
AATGACTAAAAGatatTTCTTACATTATCAATGGGTGCCTTTTTACGTGG
TTAGTTTGGCTATCCTATACTACGTTCCATATCTAATCTTCAAGTCGGTC
AACTCAGATCTCATCTCACTGGTGGATACAGTGGAAACCGGCAATCTACG
AGATGTGGATAAGATTGCCAACAACTACTTTAACTATCGCATCAATTCTA
AAGTCAAGATGAAGATCATTGTTTGGGTTATTTTCATTGTCGTTAACATC
TCTGGCTTCTTATTGACCGATTACACAATGGATGGACGATTTATCGATTA
TGGTCTTAACTGGATCAGTTGGAATGATGTACCCAACCATATTGCTCATG
ACATTGTGAAAAGAGGAACACCAAAACCTGGCGATCATTTCTTGCCATCT
GTCGGAATGTGTGATATCCACGAAGCGCTGAATGACAAACGTGGTATTTA
CATCGATAAacacAAAGTGATCTGTGAAATCAGCCAAAACATTCGATACC
AATACAATTTTATCATTCTATGGTTCTTCTTTGCTTCTGGTTTGGTCATC
TCATCATTTGGTCTTctccattcaattttcaaacttctcAAATCAATGTT
TTGGGTTTACTCACCAAAGTTGTTCGACCATGAAACATCACTATCTAATC
GCGTTCATTCTCAACTCACACTCAGAGAGATGGAATATCTTGATAAGATT
CGTCAGATGGATATGACAATGTACGGCGAGATTCTCCGGGAATTGACAAG
ATATAAACCAAGTATTGGCTCTATTAAGAAGTTTGCACCTCAAACTACAT
CTGAGATGATTACATTGCTACCATCAGCACCAAAAGAAATACAAAATCAT
TGGGATAGACTTGTTTGAATGCATGGCCTCACCACTTCTCTTTGGGAGGT
CATCTCCTGGAAATCAAAATCTCAATATGACACAGCTGGCGATCAATACA
CTCGTATCTTCATGCCAAAACTGTTCATCATTTCGTCTCTTATAATGGCT
TTCAGCTACTTCAATGATAAACTAAACTGCATGGTTTCATCAAGGCTCAA
TGGATTGAAGGAGTTTGTTCAAGAGACCTGTTGGATTCAAGGATTTTACA
TTTACCATGAAATGCACACAAAATTGAACGAGTCTTCGTATTACGGAATT
CCTGAATATACAGGTTATAATGGAATTACAAAAGACGGTCAATTATGCTC
AACTATCAACCGTGCAGGAGGAGTCCATACCAAATGTGCACCAATGACTA
AAAGatatTTCTTACATTATCAATGGGTGCCTTTTTACGTGGTTAGTTTG
GCTATCCTATACTACGTTCCATATCTAATCTTCAAGTCGGTCAACTCAGA
TCTCATCTCACTGGTGGATACAGTGGAAACCGGCAATCTACGAGATGTGG
ATAAGATTGCCAACAACTACTTTAACTATCGCATCAATTCTAAAGTCAAG
ATGAAGATCATTGTTTGGGTTATTTTCATTGTCGTTAACATCTCTGGCTT
CTTATTGACCGATTACACAATGGATGGACGATTTATCGATTATGGTCTTA
ACTGGATCAGTTGGAATGATGTACCCAACCATATTGCTCATGACATTGTG
AAAAGAGGAACACCAAAACCTGGCGATCATTTCTTGCCATCTGTCGGAAT
GTGTGATATCCACGAAGCGCTGAATGACAAACGTGGTATTTACATCGATA
AacacAAAGTGATCTGTGAAATCAGCCAAAACATTCGATACCAATACAAT
TTTATCATTCTATGGTTCTTCTTTGCTTCTGGTTTGGTCATCTCATCATT
TGGTCTTctccattcaattttcaaacttctcAAATCAATGTTTTGGGTTT
ACTCACCAAAGTTGTTCGACCATGAAACATCACTATCTAATCGCGTTCAT
TCTCAACTCACACTCAGAGAGATGGAATATCTTGATAAGATTCGTCAGAT
GGATATGACAATGTACGGCGAGATTCTCCGGGAATTGACAAGATATAAAC
CAAGTATTGGCTCTATTAAGAAGTTTGCACCTCAAACTACATCTGAGATG
ATTACATTGCTACCATCAGCACCAAAAGAAATACAAAATCATTGGGATAG
ACTTGTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:1049836..1054920 + |
|
