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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:530430..538193+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1228.2.p3 ID=MSTRG.1228.2.p3|Name=MSTRG.1228.2.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7764bp|location=Sequence derived from alignment at sc0000006_pilon:530430..538193+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACATTCCTCATGGtgttttgagagttttgttGAGTCGGCATGGCTGCA
AACAAACAGCACCAAACCAGAGACTGGGTAGGTACTTAACTCAGTGATTC
AGTAAAATTACATTGCCAACAGGAGAACTAGTTGAACGAATTAGTTggac
gaacaaaaaaaaagcagATAATTCAGGATAAGAGATACCTGATCAGCTGC
ACATGGGAAACCATTCACTGTCATGTGCAGCTGCTCCTCAGGATTTGGCG
AAATGCCTGGGTGACCAGCCACAGGACCCTTGTATTGAGACGTGAGATTG
AATGAAGCGTTGGACGGAAAGAAGCAAAAAGTAAAGTAATACCTCAATAG
TCCAGGGCTAACCTGGTGTGTTTAAGCTATGCGGTCTTTGGTCTTTTGTC
CAGGTTGATACTTGATAGCCAGCACAAGCCAAACAAGTTCCGCTTGATCG
GCCACTTCTGAGTATAAAACAACTCAGGTGGGTTGGGCTACCTTTGGCCT
AGGCCCCGGGATCAGCAGCCTCTACCCGGTATTCGTTTTCTTCTTGactt
ttgtttatgtttatgttttttctgTTGCTCTGAAAAAACAATGGCCTCAG
CTCTCCAAGGCCTTAGACTCAAATTTAGAGTaattggtgtttctttttaa
ttgttataTCTGTTATCTCTGTTATTCTTTTTAAGTGTTATATCTTTGAT
AACCACACACTGCTCTGCGTTCACGGCTGTGAGATTCTGAAAGGAAAACA
GAGCATGTTGTTGAAGTTTTTGATATTGTTTGAATGTGGATCTTTAAATG
TCAGGTTTCCTGTTCTAATTTTACTATTCCTTCTCATAAATAGAAAGGAT
GAGATGATAAAAGAACAAGGGAAGATGGATTTGTTGTTTGTAACCAGTTT
TCCACTGGTTGCTAAAAAGCGAAATCTAGTTTTGAAAAGGAAATCTTATG
TTTCATTAGAGTTACTGGGTTCGAACATGTTACATATTTACCTCCTTCCT
TCAACTCATTTGAGCTTGCTTGTTGAAGAACAAAACAaaccagaaaaaga
aaaacgattTTCATCATGATACCAAGAGTTAActttgttgtttgtttctt
GTGGTTTATCTTCTCTGTCTGATGGTGAGCTTCTTAATACTGTTCACTTC
TTGCGTTTCTATTTATATGCATGTGGCAATGAACAATGGAAATGAAGTCA
TCGTCATTATTTGGTCTTCTAAAAACGTATTATCTCAccatcaaaattaa
attatatAGATAGTTAAAATTAGATTTCTTGGGATTTTTGAGTGTCAGCG
TTTCAGcattttttttctgtgataatgttttgatgacgtaaatGACAGTT
GATATCAAAACATTAAGAACTGTAGTTAGCAAAACATATAAGAACTGTAA
GTAGATTAGATAATATTACTCAACAACTCTTTAAGCTTCCGTGTTTCTTG
AGGTACTGAAAAAAGAATTCTGGCAAAGAAATGAAAATGGGACATATGCC
gacatttttactttaaatgTGCGAACACGCCGCcgcaaataagaaaatat
agtgACTTTTTTCGTGTGGGGCTGAAAACatggggggcactcgatttcta
aacgacgcaTGTGCCGCCAATAAATGgatttcaaaatcggacccttacag
tgcagcccttgagcagtgaaaatgTACCCTTACTGTGCATTTTACCGAAc
atttctgacccttacagtgtagttagATTTCATATCTTTTTCTGCTGAAG
CCACCtaaaaatgagcctgagatgtgGACACAAtctgcaaaacaaatcaa
aattggtgcgagtcaaaactataaagatacatcagattttcactttcaga
cttgcaattcagcagtcccaaaaaacacccttacagtgtatcacGCTAAA
AGagacccttgcagtgcattctatcaaaagtacacccttcgagggtctcg
aaaaaccttcCCTTAAGAGTGGtacatgccgtgggtcggaccatTTAAGT
GCCCCGGGCCGACAAAGCAGGCCGACATTATTACTCAgtaaatacaattt
tttatatCGTATTTGATTTTGGCGCATACGCACCTTAATTTATAGAATAT
GTAAAGCTTGAGCTTGATTAGGTTGGCTAAGCTGAAAGATCACGCTTGAA
TTATCTTATTGACATTTTAAATCGGCGCCGTCTAATGTAAAGGTTTTAAC
AGAGattaataaaattaaaacattgcAAGAACTGGAAGAGCTTTTAACAT
TATGCTTTTCTTGTTGTTGCTTTTGGAATAGTGATTttacaaaaactcaa
aaaaatataaGGAATTGTGTATTGAATGTTCAGCAAACATGACCATTACA
ACATTTATTGAATCTTTGGTCATATACACGAGTACCACAACAAGCTGGTG
AAATTCCTGCTCTTGTGCCGATCACTCCACCGCAACACATATCAAATCTC
CTGTCATAATTCCTTGTCCCGCAACACGCAGGAGATACTCCCGACCTTGT
TACGATCGTGCCTCTGCAACACATATCGAATCTGCGATCGTACCCCCGTG
TCCCACAACAAGCAGGTGAGACACCCGATCTCGTCACGACCATACCGTTA
CAACACATATCGAATCGTGAGTTGTATTGTCGGTTGCCACAGATACCTCG
ACGTTGGCGCTGATGAACAtctgaaagaaaaagtttttgttttaagaaaa
tgccttacaaaatgaaaaacctcCCCTAAATGATCGGATACATATACTTT
TGATAGTCCAGAAATGTGCTACAATGAATATTTAGGAATCTTTTTGAGAT
CTTATGCgaaggtttttttatttaacctcTTTATTAAACAGTCTTGTGTT
TCTCAAGACTCTCGTCAGTACGACTTGGGTAAGCGAGAATAGACTAACCA
AACTAGCTTGGGTAAGCGAGAATAGACTAACTAAACTAGCTAGCATGAGC
TTACTCCTAAATACAGTTTTTAGAGTGCTCAAAGAACTTACAATTCTGAG
CGCGTAATttcacaagaaaatattttcaactcgTTTAACGAGCCTTGTTA
CCTTGATCTGAGTACACTTGGCCGATGATAACcacagcaaaaatgaaaaa
aatcttcatgATGTCTTCTGAtgttttaaagtgaaatttgaACCGTCACT
GCTCATGTAACTTTTTGTAATGatgtgaaaatgttttgaaatctgTCAAA
TTATTTAATGTGTATATTGTAACAGTTAGCATAATATTTGACAGTATTAC
TGTATGAAATTTCAACACTGAAttgaataaacaataaaattaaacACACG
TCCCTAAATACCTAATACCGACAGCTTTttcttaaattacaaaaaatccC
TAATAAAATACCATATTCCaaagaatcataaaaaatcaGCGAGCATCAAA
GCTATTGTCAGGTTTCAAACAATCTACCACACGTAAACAAAGAAACCATA
CCATCCGTCCTGCAAAGTGCACAGcggaaaaagtataaaattttcCTAGT
TTCAGTAATAATTTTCCTTTCCAAGAAGTCTTTTCTGCCGATCCGCCAAA
ACTTTAAACCATTGTGAGTTTTAAAATGGGTTCCAGACAAAGACATTGCC
ACCGTAAGAAAGCTCATAGCCTTGACTCTCTAAAATAACGAGGTCATTTC
GGCTGACAACGAAACAAGCAATTGCAAGGCCTTAAAATCCATGATAGAGC
TCTTTGAACTGAGTaaaaaaaCTATAACGACAAAGAGCTCTATCAAATGG
ATACAGTGGTAACACTTAAATTCCAAATCaaccctcaaattgaccaatAT
CAATTTCAAAAGCTTTTGCATATTtggataaagaaaatcaaacgaACTAT
CATGAAAAGTGTGAGAATCCGCAACTGCAAGGTCGATGATGAAGAATTAT
ATAGTTATTATTCAATTAGATGAAATTAACGTAAAGATATATTAATCGAC
TACTCTTTTTCAGGATCGAACCAGTTCTTTGATCTCCACAACTGACCAAC
CGATTCCAAACACGATACAAAACGAAAGTGGAAGTGACCGGCGTTTCTCA
TCCACCCAACCACAACTACCCTTTGAAGAAACAGATCACGTGGGTGCAAG
ACAGCCGTTGGCGTCGCTTCAATTGCAGCTACCTCCAAATGCGAGTGAAA
TTGTTAACAAACTTGTCACCGCTACGTATACTACAAGGTAGAAAACTTAT
TTTTAGCCATTACttctaaaatccaaaaatgcATGTATCCTTCGATCTAG
GTCTGAAGGAACCTAGCTGGGAAACAAGCAATAACTCTCCCTACAGTTCG
TGATCTCTAGCTCCTCAATCTGCAGCCGAAAACAGGGCAAGCAGGGCACA
TTGTAAGATATCcgatccaatttttcttttcgtgTGGAAGAGTGACCTGA
GAAAGAAAGAATCCTGCTggccaaaacaaaagaaattcttggAAGTCCAT
GATCGATATATTGTAAAGGGTTGGGTGGTATAGCAAAGtagattaattaa
ttaattttcatttttccaggaaTGATTTTCGAGATGCTGGTGTTCTCTAT
AATCCGAAATCGTTCCTCGAAAAGTTGAAATCGTGGGCTAAGTGTTTGTC
AGAGGCTACAAAGAGCTTCCGCGAGGAATGTTTTCGATTATTGGACTCAA
ATATTCAAAGAGAAATGAACAATACCATCTTAGCTTACCTAGATGTGCAG
TGCAATGATCTCTTCTTCCAACAGTCACACTCAGCGTTCAGTGAAATTTG
TAATCTGGCCATGTTGTGTTTCGAAACGAACACTTTCCCTAAGAAATGCT
CCATGTTAAAAGCTCACGAAATAAGTTTGTTGAACACGGAATTATCTCTT
GACGTAATCATGGAGAACGCTGAGGAAGAAATGCAAAGAATTTTGACGGC
GGAGAGCAAAAATTCACCAGTGGTGGAGAAAGTTGAGAAAGACCCTCCAT
CGTTGGAGAAAGATACTGAAAAGGTGACGGTACCGGATTTGTTGCAAGAT
ATAAAGAATATCAAAGACGTTGGCGAGCTACTAGACCGGAAAAGTCTGAG
CACCATAGCCTCTGTTGATTCTGGTAGTAAATCGTCCAACTCAACGTGCG
ATATTTTACGCGAATCAATCGATATTTTAATCGAAAATACCGCCATGTGT
GAAAATTACGACTTAACCGAAGGTGAATCGTGTGAATGGTGTTTAATCGA
TAAATGTCGTGCGTGCTTCGTGTTGAGGTATTTTCCCATCATCAATTTTG
CACGCATTCGTGTCATTTTGTCATCCACTAAGAAGTGCCGATGGAGAACT
TGGCTTGCTTATGTGATCACTCTCAAATGTGAGTATAAGAAACAATCTTG
AGGGTTTCTGGGGGTTATAGTTTGAGAGCTGTTTTCCTTTTTATTAGGGT
CCAAGCCTCAGAATTCTAACCATCCTCAACCGGATTTGTTTCGGTTAGAT
TTTCGATATCGATGGTCCCTATGGGTTGTACTAATTGCCTGTAAATCTCT
TCGGGGCTTGTCAGTATAGAAGAAACCGCTAGCACCGGATCGAACAAAGC
ATTTTGACGGTCTTTGATACGGTGAACACGTGTAGGATGACTTCACGATG
ACTTATGACCTAATAAAATAGACCAACAGCTCTAACAAGCTAACTCTTGA
TAACTCTCAGCTGTAACTGATACGCTAAGCTGCTTAATTCTATGCCAATT
AAAATAGATAGATATTTTCAGCCATCAATGCATACGCTAAGCTGCTTATT
TCTGTCAATTAATATTTTCAGCTATAAGGCGAgatcaatttaatttgttg
tttcaCGGGCCAAGCTGCccaaaaagagggtcggtcggcgaaaaaatgaa
aataaaagtagaatttctcctacaaaatctcctaaaaaggcagcaaaaat
tactacatcttgacaaaaatgcgaaatagaaaataaacaGACACAGAGAG
Ctcaaattcatggataaaatgaaaaattgaacatgaaattctcataacct
tggaaaaactaccaaaattttgaaaatttggcagcctgtaaagcaatgaa
aataaaaatgtactattaaaatcaattgtatttttatttcgatttttggg
atTTCAGGGTTGGTCGGGCctgtaaaacaactaatcaaattggtcttgtC
TAAATATAAAATGGTTATAACTGTAGATTTCTCATGAACGTTTTCATTTT
TCGTTTTGTTGTTGAACGTTTCAGATACTCATCGGAATTCAACATTGGCA
AAACTGATCGAAAGTAATTCACCGGATTCTAACATCCTTGAAGAAGTTGT
CAATACTGATCTCAAACATTTTCTTGCCGTCATCTCAAAGTATGTATGTT
TGTTCAACTTGTTTTTTATCTATACCAGAAGAACagtgggcttttccaga
aaaaccccctgttgaggaggtccactTCCTCCaaggggtaaggtttgata
tgtggcggaattccgtAGGAGATACAAAAactttgtcaaaaataactgga
attccatgggggttgCTTTTTAAACCGTACTAAAATttagaattccagag
gggtttaaacctaaaattgcctggaattccagggggttacagcatttcca
gctatagagggatggacctcctcaacagggggtatacggttttttctgga
aaagctcaaTTTGTAGTAAACATAGtttcttttcaaatctttttactGAT
ACTGAGTCCTGTGTTAGTTTCTCAGTATTAATCctagtttttaaataaag
ccAGATGCCTATTCCACGCCTAAAGTGTTGAAAATAGTCAAATGTCCACT
GAACTAGTTAACTTCCAACCTTCACATTCTTTAGACTCTACAACCGTTCG
TTGAACTTACTGCTGGACTGCATCACGTGCAAAGACTTGGGCCAATGGGA
GATCATTATTTTGATGTATTCTGGTATCCTTGGCAACGACGAATCAAAAC
ACGAGGAATATCTCGCTTATTTCCaacaaaaattagaaatcaaaGACTTG
AAACTAGAACACATTTTCACGCGTCTTGTGGTCGAATCCGCCCTTCAGTA
CCACCCTGGGAACGCCCTCTTGTTTTGTGGTAGTTCTGGTAAAGCACGTC
CTGGTTCAAGCACCTTGGAATGGCGTTGGGGTGGTCTTTTgaaagatctt
gtagagaatcTCCATAAATCACCCACCAAATGTGAAGAGCATGTGGATAT
CATAGCGAAGTTGTGTTTTAAACACGGGTTAGTCATTAACTTCCCTCTTT
TATAAATcaattgtttttcttgttttgtgaATGAAACCATTATTTAGGAG
ACTGTCTACTCCATATCAATTTTACCAGGCCAATACATCGACCCCCCAAA
TTTACTACCCAGCTCTTGCCACGCCTGCAAGCAAGTTTGGAATACACAAA
CCAAATAATACAGAATGCAAATGGCAATGACAGTTTTTACAAAATGACAC
TACCGTCTACAACCTAGAAAATATGGTTAAAAAGTTCTTCTTGGctgtca
ttttgttttgttgagCTTTCTGCTTCAGTGCAGAAATTGTTTCgttattt
atttttcaggtaTTGGCATGGCTACGTAACCTTAGCAACCATCAACCAAT
CACTTTATCAATTAATCTGTCAACTAGCTGACACTCGTTTACTTGATTAC
TTCATCAACACTCGTGAGTAATAGATACTTTGCACATCTcacaaaataat
taaataatactGACATAAGAACTAGTGAATGTCAGAAGCATCTAGGTCTT
ATCTTGGATTCCAA Coding sequence (CDS) from alignment at sc0000006_pilon:530430..538193+ >MSTRG.1228.2.p3 ID=MSTRG.1228.2.p3|Name=MSTRG.1228.2.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=315bp|location=Sequence derived from alignment at sc0000006_pilon:530430..538193+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTTGAAGTTTTTGATATTGTTTGAATGTGGATCTTTAAATGTCAG
GTTTCCTGTTCTAATTTTACTATTCCTTCTCATAAATAGAAAGGATGAGA
TGATAAAAGAACAAGGGAAGATGGATTTGTTGTTTGTAACCAGTTTTCCA
CTGGTTGCTAAAAAGCGAAATCTAGTTTTGAAAAGGAAATCTTATGTTTC
ATTAGAGTTACTGGGTTCGAACATGTTACATATTTACCTCCTTCCTTCAA
CTCATTTGAGCTTGCTTGTTGAAGAACAAAACAaaccagaaaaagaaaaa
cgattTTCATCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:530430..538193 + |
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