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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000092_pilon:1036041..1038257+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12327.1.p1 ID=MSTRG.12327.1.p1|Name=MSTRG.12327.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2217bp|location=Sequence derived from alignment at sc0000092_pilon:1036041..1038257+ (Clytia hemisphaerica_ch_hm2_pilon)
CGCAAAAGGGACAATAAAAATGTCCCTCtttttagttatatattattttt
ttgttatttttggtttggttggtggtgttgtttgtggCGGATTTATTGGA
TATAAGCGACACCCTGCTGAAGCAGGTTTTGCAACTGGAGTCTATATTGT
CTTCCATTTATTTGATGGAGTTTTTGCATCTTTTTGTCGCCGCGAAACTC
ATTTAAAATGCGTACGTTTGAAGGTCCTGCAATGGCGTAAGTGTACATAA
AGTTTCCCTGTTTAATCTGTTTATTGTCACAACGCTACTAAAAGGAAAAG
TACCAGATGCAGCTTTAAGCATTTTTTACTCgcaaaatataatttatttt
tcattgtccTCAGGAAGGAGGTATATACGTGGTGCTAAGGACCTCAATCT
GGTTTCCAAAGCCACTCGTAAAACTTCTTAATTTTACTGAGAGGACTGAT
TTGAAGTTTGTAAGGACCTTTAGTTCATTTTACACTTAAAGTCAGCAACA
TTATATCGAATCGGCTAGAGCTAACATAGTGAAATTTAGTTCCCAAAACG
TCATGCCCGAAATAAATTCTTGGTCTACTTTAAttggataaactttcgcg
gggattaaatttcgtgaatttcgcggatttggctGTCATCTgtgaaaatc
cgcgaaattaagtcccactggaaatttggaagggcctcatccgcaaaata
tttctaaacaaaattcaaaatatgtcaaataaatactttttgaatgttta
cttgcttcaaagaagcgcaaataatgtgtatttcaacaaccaacatgcat
gatttgacagttaaagtcacaaaatcgtgaaaatattgacacccaatagt
gccacccacGAAATTGAGTCcctacaaaatttttgaatttttcagatAGG
CCCAATACCGCGAAATTCAATCTCCACAAAAgcttatcccattaaagtat
aacaCACTTTATTTCGATTTTCCACCACGCATTCATCTCTGGGAAGTATC
TGCCGAATCAGtgaaaaaatagacaaaaatggTATTATGAAGAAAATACT
CTCCTTATTCATATATTCAACAAAGACGATGAGTTATTTGCCTTTTCTCC
AGTACCATTTCCGGAGTGCTTAAAGCCAATTATCTCAAACAGGAATCTTG
TTTCTTATCCAATTTGGAAACTAAAGATGTTTTCGGAAAATTTCCACCTT
CTTGTTCGgaaaatatttcccgttaagctAATACTTACTATTTCCGTATA
ATGTTGCTGACTGGTTGTCGATATAGAGCAGATTCATATTGGTATAATAA
AACTTATTTTCTCTCGCTTTTAGAGTTTTGTTTGGCTTTGCTTGGAACCC
TTTGTATTGAGTCGTCGATTATGAAATCTATTTTCGGAGCATGGGCTGTG
TTGTCATTCGGTCACACAGTTATTGCAGCCATTATGCTATATCGTGATGA
CGGTTTAAGATTAATTTTTGGAGGAAGCCATGAAAGAAAGATTGCTTTGG
AagacaaaatcaaacaaaatatacGAGCAGCGCCTGAAGTTGTAACATAT
TGTGAAGTGAGAGAACCAAAACCGatctggaaattttggaaaacaagaaa
agtcattttgagaaaaaataagaCTTACGAATATAAACATTGGATTGATT
TGAGCCTGGTTGTTTTGTTTAAGAATATTGAAAAGGAGCAGAATATTCAA
aagattgattttgatattcGATTTGATGACGAGGAAACAGAAAAATCATA
TCAACGACATGTTCAGAATCTTTTGGACGAGTTACCTGAAATGTGTCGGA
ATGGTGAGATCAAAACAAAACGCATAATCAAAGTGGATGGAATCGACATT
GAAAAAGAGATTGTCACGAATCTACATTCACCTGGTCTTGAAGAGCTTCT
AGAAAAGCATCCTTGGTTAGTGGTTTTGTCTTTGCCTTTCAGCATCCTCA
ACATCATGGAATGGTTAATCGTTAGACTAGATATTGAACCCTTTTTAAAG
AAAGTGACCATCAGAAAAGTCGTTTCAAACAAAGATATTGAGGTCACATA
AACCTCACTTAACTTCACGTCAAGTGTTTTGCTTCGACAAATGGCAGAAA
TATAGAATAGATTAACATATCTTTTTTATTACCTGAATATTATAtcacgt
ttttataagcatgataaatttttttttatcattcacTCGCTTAGCTATTC
TAAAATAATGTGGTTTA Coding sequence (CDS) from alignment at sc0000092_pilon:1036041..1038257+ >MSTRG.12327.1.p1 ID=MSTRG.12327.1.p1|Name=MSTRG.12327.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1926bp|location=Sequence derived from alignment at sc0000092_pilon:1036041..1038257+ (Clytia hemisphaerica_ch_hm2_pilon)
GCAAAAGGGACAATAAAAATGTCCCTCtttttagttatatattatttttt
tgttatttttggtttggttggtggtgttgtttgtggCGGATTTATTGGAT
ATAAGCGACACCCTGCTGAAGCAGGTTTTGCAACTGGAGTCTATATTGTC
TTCCATTTATTTGATGGAGTTTTTGCATCTTTTTGTCGCCGCGAAACTCA
TTTAAAATGCGTACGTTTGAAGGTCCTGCAATGGCAGTTTTGTTTGGCTT
TGCTTGGAACCCTTTGTATTGAGTCGTCGATTATGAAATCTATTTTCGGA
GCATGGGCTGTGTTGTCATTCGGTCACACAGTTATTGCAGCCATTATGCT
ATATCGTGATGACGGTTTAAGATTAATTTTTGGAGGAAGCCATGAAAGAA
AGATTGCTTTGGAagacaaaatcaaacaaaatatacGAGCAGCGCCTGAA
GTTGTAACATATTGTGAAGTGAGAGAACCAAAACCGatctggaaattttg
gaaaacaagaaaagtcattttgagaaaaaataagaCTTACGAATATAAAC
ATTGGATTGATTTGAGCCTGGTTGTTTTGTTTAAGAATATTGAAAAGGAG
CAGAATATTCAAaagattgattttgatattcGATTTGATGACGAGGAAAC
AGAAAAATCATATCAACGACATGTTCAGAATCTTTTGGACGAGTTACCTG
AAATGTGTCGGAATGGTGAGATCAAAACAAAACGCATAATCAAAGTGGAT
GGAATCGACATTGAAAAAGAGATTGTCACGAATCTACATTCACCTGGTCT
TGAAGAGCTTCTAGAAAAGCATCCTTGGTTAGTGGTTTTGTCTTTGCCTT
TCAGCATCCTCAACATCATGGAATGGTTAATCGTTAGACTAGATATTGAA
CCCTTTTTAAAGAAAGTGACCATCAGAAAAGTCGTTTCAAACAAAGATAT
TGAGGTCACATAAGCAAAAGGGACAATAAAAATGTCCCTCtttttagtta
tatattatttttttgttatttttggtttggttggtggtgttgtttgtggC
GGATTTATTGGATATAAGCGACACCCTGCTGAAGCAGGTTTTGCAACTGG
AGTCTATATTGTCTTCCATTTATTTGATGGAGTTTTTGCATCTTTTTGTC
GCCGCGAAACTCATTTAAAATGCGTACGTTTGAAGGTCCTGCAATGGCAG
TTTTGTTTGGCTTTGCTTGGAACCCTTTGTATTGAGTCGTCGATTATGAA
ATCTATTTTCGGAGCATGGGCTGTGTTGTCATTCGGTCACACAGTTATTG
CAGCCATTATGCTATATCGTGATGACGGTTTAAGATTAATTTTTGGAGGA
AGCCATGAAAGAAAGATTGCTTTGGAagacaaaatcaaacaaaatatacG
AGCAGCGCCTGAAGTTGTAACATATTGTGAAGTGAGAGAACCAAAACCGa
tctggaaattttggaaaacaagaaaagtcattttgagaaaaaataagaCT
TACGAATATAAACATTGGATTGATTTGAGCCTGGTTGTTTTGTTTAAGAA
TATTGAAAAGGAGCAGAATATTCAAaagattgattttgatattcGATTTG
ATGACGAGGAAACAGAAAAATCATATCAACGACATGTTCAGAATCTTTTG
GACGAGTTACCTGAAATGTGTCGGAATGGTGAGATCAAAACAAAACGCAT
AATCAAAGTGGATGGAATCGACATTGAAAAAGAGATTGTCACGAATCTAC
ATTCACCTGGTCTTGAAGAGCTTCTAGAAAAGCATCCTTGGTTAGTGGTT
TTGTCTTTGCCTTTCAGCATCCTCAACATCATGGAATGGTTAATCGTTAG
ACTAGATATTGAACCCTTTTTAAAGAAAGTGACCATCAGAAAAGTCGTTT
CAAACAAAGATATTGAGGTCACATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000092_pilon | genome | sc0000092_pilon:1036041..1038257 + |
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