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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:434367..437286+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11833.2.p1 ID=MSTRG.11833.2.p1|Name=MSTRG.11833.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2920bp|location=Sequence derived from alignment at sc0000087_pilon:434367..437286+ (Clytia hemisphaerica_ch_hm2_pilon)
GCCATCCAACAAGCACGTCCATATCAAGTAGAAATATTAGAGGAAGCTAT
CAAAGACAACACCATAGTATGTCTTGGTACTGGGACTGGTAAAACGTTCA
TCAGCGTGATGTTGATCAGAGACAAACAAGACCAAATCAAGGGGAAATTT
GAGGATGGTGGAAAACGAACTTTCTTTCTTGTCAACACAGGTTTGTAGAA
ATATCATTAACACTGTCTAATTCTTTGCATGATTTTCTAACCCTGGTTCT
CTAAGAATCTAAAAACAGCATAAGGTATCGTTGAGGGTTAACAAAATTCT
GTTTTTTATCGTGTCAGTTTCTAAAAACCAACATATTTGTTCTCGATTTC
AGTACCACTTGCCGAACAACAAGCAAAAGCTGTTTCTCAAAACACAAGTT
TGAAAGTGAAACATTATACAGGTGATATGGGAGTTGATTTTTGGGATCAA
GATACTTGGGTGaaagaatttaatgaaaatgatGTTCTAGTGATGACTgc
ccaaattttggtcaatatACTAACCCATGGTTTTTTCACACGAGAAAACA
TTAATCTTCTAATAATGGATGAATGCCACAACGCAACAAAGAAACACCCG
TATGTTAGGGTAATGGAATTTTTACCAGTCACTGGTGGTCCCCATATAAT
GGGTTTGACTGCCTCAATAATCAatgagaaatataaaaaatcaccAGATA
AAGATTCTATCAGAGATTTTCTTGATGACCGTATGAAAATTTTGGAAACC
ACTATGCGTTCTAAGTGCATTACATGCTCTGACCGTGAAGCTACATCAAA
GTATGCTACAAAACCTGTTGAATCTGTATTGATGTTTTCAAGCAAATATA
AGATCAACGACTTTGACAAAATgaatttgttcattttcaaattgaaaaga
GAGTTCCAAGAAGCTTCTGAAATGTTTGGTAAGAAGAATTTATCTCATCC
AAGGGTGAAAATTAGGGTTAAACCTTCGGGTTTTTTAGTTTGCAAAGATT
CTGCTTTTTCATACAGTAATATGATATTTCATCTTTCTAAGTTTCTTCTG
CTCTTTTGTAACTGTTTCATAAATCATCTTTTTAGTAAAAATGACCACag
tacaaatttaaaaaatgtgaaCtttttttATGAttcattTCAGATCTTCA
AAAGAAACAGGCTAAAGTTGACAAGTCATTGTTTCGGAATGTAAGCTACT
TTGATGTTATCAACAGAACAAGTCGTTTAGGATTTAAAGATGCATGTGCC
ATTGCTTCAGATGCTGTAAAGCTTGGTCTGCAGATTCTGGAAACACTTGG
ACCAATATCAACTTTTGATGCCATTGAAATACTTTCAGGACAACTAGGTA
GAATTGTTTGACCACAATTTTATTCTCattcaaatttaagaaattatttt
tgttattcaactattttttgttgagtatagTGCTTCTTGATATCAATTGA
TACCACCATGATTTAACaaggtttttcaaaaagtttcgtTCAACTTTGGT
GTGCTTTTCCCAATTGTTAATTTATATggcatttttaaactttgactcat
tttcttttaagaaaaacacaaaaaaagatTCAGCACAGAGAATGGAAAGG
TGCTCAGAGATTGCAGTAACGTTTTCAACAAGTTTGAAACTGGTTACAGG
GAAGCAGTAATCAAAGAAGGCTTTGGTGAACCAGACCGTGTGATTCCTTT
ACAACCTTTTATCACCAACAAGGCACATGTTTTTCTGACAGATGTATTAC
TGcaggaaaaattaaattttcaaaggcAAAATAAAGGTAAAACATCTGAC
TATTTCAAGTCCTTGATCTTTCAAATTATCCTAAATACTACATTAAACAA
CAGTAAACTACGTATTGAGGGATGCTCAAGAGCGAAGACTTTAGGCATTT
TTTAAATCACCTTTCCTGGTACACTCTAACCCACGCTTTATTTCAAGTGG
TGATAGGTGTATTTGAAATGAATAATCAACCTACGATCCATACATACTga
tatttacaatattttttcatcttaGAACTTCATGCCATCATGTTTGTTCA
ACGTAGATGTACAGCCATTATTCTATCCCAACTCATTCAAAGAATGGTCA
AATCTGATTCGAATACATATCAAGGGATTTCTAGTGAATATGTTTTAGGT
CATGGTTTTGATGAAAACATCCGTTTGGCAGATAGTTTCATGAAGTCTAC
AGAGCAAAGCAAAATCTTGACCCGATTCAAAGCTGCCGAATTTAACGTTC
TGGTGGCCACTAGTGTAGTTGAGGAAGGTCTTGATGTTCGCAAATGTAAC
CTGGTGGTGCGTTTTGATGGAATCTTCAATTATCGAGAGTATGCACAGTC
TAAAGGGAGAGCACGGGCTAAAGATTCCAAATTTATTGTAATGGCGAGTG
AGGAAGATTATGAGGACACTTCTAGACAACTTGAGGTAAATTTCCAAGTT
TTATGGAAATTATTTCTACTAAATTCTTAAAATCGAGTCATTTGCAGCAA
AACATTGCATTTATATGTTTCCCCATGTTTTTAAGTTTCATAGATAACTT
CCACTAAAGTCGCAAAGTTTCAGCTTAAGAAATGGCATtccaaaaactat
ttttcttatcAACAAGGTAATGCAAAAAATCGAATCAGTATTATTTGACA
AATGCCAAGACCGGGAACTACCAACAGAGGATGAGATTAGAGAGCAGATG
TTCGATGAAATTGATGAAATGGTCAACACTATCTTCTCGGAAGATGGAAA
TGCAAGAATCAAACCTCATTACGCTGTCAGCTTGTTATACAGGTCAGGTG
GAACATAGAATGAAAGTCTACTTAGGTTGTTAGGTTTCTAGGTTGCGAAA
TGGCAATTTTACcacattttaactttttgccATTTTGGTTAATTTTCATT
CGAAAAACTTTAAGCCCTTT Coding sequence (CDS) from alignment at sc0000087_pilon:434367..437286+ >MSTRG.11833.2.p1 ID=MSTRG.11833.2.p1|Name=MSTRG.11833.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=7665bp|location=Sequence derived from alignment at sc0000087_pilon:434367..437286+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAGTTGATTTTTGGGATCAAGATACTTGGGTGaaagaatttaatga
aaatgatGTTCTAGTGATGACTgcccaaattttggtcaatatACTAACCC
ATGGTTTTTTCACACGAGAAAACATTAATCTTCTAATAATGGATGAATGC
CACAACGCAACAAAGAAACACCCGTATGTTAGGGTAATGGAATTTTTACC
AGTCACTGGTGGTCCCCATATAATGGGTTTGACTGCCTCAATAATCAatg
agaaatataaaaaatcaccAGATAAAGATTCTATCAGAGATTTTCTTGAT
GACCGTATGAAAATTTTGGAAACCACTATGCGTTCTAAGTGCATTACATG
CTCTGACCGTGAAGCTACATCAAAGTATGCTACAAAACCTGTTGAATCTG
TATTGATGTTTTCAAGCAAATATAAGATCAACGACTTTGACAAAATgaat
ttgttcattttcaaattgaaaagaGAGTTCCAAGAAGCTTCTGAAATGTT
TGATCTTCAAAAGAAACAGGCTAAAGTTGACAAGTCATTGTTTCGGAATG
TAAGCTACTTTGATGTTATCAACAGAACAAGTCGTTTAGGATTTAAAGAT
GCATGTGCCATTGCTTCAGATGCTGTAAAGCTTGGTCTGCAGATTCTGGA
AACACTTGGACCAATATCAACTTTTGATGCCATTGAAATACTTTCAGGAC
AACTAGaaaaacacaaaaaaagatTCAGCACAGAGAATGGAAAGGTGCTC
AGAGATTGCAGTAACGTTTTCAACAAGTTTGAAACTGGTTACAGGGAAGC
AGTAATCAAAGAAGGCTTTGGTGAACCAGACCGTGTGATTCCTTTACAAC
CTTTTATCACCAACAAGGCACATGTTTTTCTGACAGATGTATTACTGcag
gaaaaattaaattttcaaaggcAAAATAAAGAACTTCATGCCATCATGTT
TGTTCAACGTAGATGTACAGCCATTATTCTATCCCAACTCATTCAAAGAA
TGGTCAAATCTGATTCGAATACATATCAAGGGATTTCTAGTGAATATGTT
TTAGGTCATGGTTTTGATGAAAACATCCGTTTGGCAGATAGTTTCATGAA
GTCTACAGAGCAAAGCAAAATCTTGACCCGATTCAAAGCTGCCGAATTTA
ACGTTCTGGTGGCCACTAGTGTAGTTGAGGAAGGTCTTGATGTTCGCAAA
TGTAACCTGGTGGTGCGTTTTGATGGAATCTTCAATTATCGAGAGTATGC
ACAGTCTAAAGGGAGAGCACGGGCTAAAGATTCCAAATTTATTGTAATGG
CGAGTGAGGAAGATTATGAGGACACTTCTAGACAACTTGAGGTAATGCAA
AAAATCGAATCAGTATTATTTGACAAATGCCAAGACCGGGAACTACCAAC
AGAGGATGAGATTAGAGAGCAGATGTTCGATGAAATTGATGAAATGGTCA
ACACTATCTTCTCGGAAGATGGAAATGCAAGAATCAAACCTCATTACGCT
GTCAGCTTGTTATACAGGTCAGGTGGAACATAGATGGGAGTTGATTTTTG
GGATCAAGATACTTGGGTGaaagaatttaatgaaaatgatGTTCTAGTGA
TGACTgcccaaattttggtcaatatACTAACCCATGGTTTTTTCACACGA
GAAAACATTAATCTTCTAATAATGGATGAATGCCACAACGCAACAAAGAA
ACACCCGTATGTTAGGGTAATGGAATTTTTACCAGTCACTGGTGGTCCCC
ATATAATGGGTTTGACTGCCTCAATAATCAatgagaaatataaaaaatca
ccAGATAAAGATTCTATCAGAGATTTTCTTGATGACCGTATGAAAATTTT
GGAAACCACTATGCGTTCTAAGTGCATTACATGCTCTGACCGTGAAGCTA
CATCAAAGTATGCTACAAAACCTGTTGAATCTGTATTGATGTTTTCAAGC
AAATATAAGATCAACGACTTTGACAAAATgaatttgttcattttcaaatt
gaaaagaGAGTTCCAAGAAGCTTCTGAAATGTTTGATCTTCAAAAGAAAC
AGGCTAAAGTTGACAAGTCATTGTTTCGGAATGTAAGCTACTTTGATGTT
ATCAACAGAACAAGTCGTTTAGGATTTAAAGATGCATGTGCCATTGCTTC
AGATGCTGTAAAGCTTGGTCTGCAGATTCTGGAAACACTTGGACCAATAT
CAACTTTTGATGCCATTGAAATACTTTCAGGACAACTAGaaaaacacaaa
aaaagatTCAGCACAGAGAATGGAAAGGTGCTCAGAGATTGCAGTAACGT
TTTCAACAAGTTTGAAACTGGTTACAGGGAAGCAGTAATCAAAGAAGGCT
TTGGTGAACCAGACCGTGTGATTCCTTTACAACCTTTTATCACCAACAAG
GCACATGTTTTTCTGACAGATGTATTACTGcaggaaaaattaaattttca
aaggcAAAATAAAGAACTTCATGCCATCATGTTTGTTCAACGTAGATGTA
CAGCCATTATTCTATCCCAACTCATTCAAAGAATGGTCAAATCTGATTCG
AATACATATCAAGGGATTTCTAGTGAATATGTTTTAGGTCATGGTTTTGA
TGAAAACATCCGTTTGGCAGATAGTTTCATGAAGTCTACAGAGCAAAGCA
AAATCTTGACCCGATTCAAAGCTGCCGAATTTAACGTTCTGGTGGCCACT
AGTGTAGTTGAGGAAGGTCTTGATGTTCGCAAATGTAACCTGGTGGTGCG
TTTTGATGGAATCTTCAATTATCGAGAGTATGCACAGTCTAAAGGGAGAG
CACGGGCTAAAGATTCCAAATTTATTGTAATGGCGAGTGAGGAAGATTAT
GAGGACACTTCTAGACAACTTGAGGTAATGCAAAAAATCGAATCAGTATT
ATTTGACAAATGCCAAGACCGGGAACTACCAACAGAGGATGAGATTAGAG
AGCAGATGTTCGATGAAATTGATGAAATGGTCAACACTATCTTCTCGGAA
GATGGAAATGCAAGAATCAAACCTCATTACGCTGTCAGCTTGTTATACAG
GTCAGGTGGAACATAGATGGGAGTTGATTTTTGGGATCAAGATACTTGGG
TGaaagaatttaatgaaaatgatGTTCTAGTGATGACTgcccaaattttg
gtcaatatACTAACCCATGGTTTTTTCACACGAGAAAACATTAATCTTCT
AATAATGGATGAATGCCACAACGCAACAAAGAAACACCCGTATGTTAGGG
TAATGGAATTTTTACCAGTCACTGGTGGTCCCCATATAATGGGTTTGACT
GCCTCAATAATCAatgagaaatataaaaaatcaccAGATAAAGATTCTAT
CAGAGATTTTCTTGATGACCGTATGAAAATTTTGGAAACCACTATGCGTT
CTAAGTGCATTACATGCTCTGACCGTGAAGCTACATCAAAGTATGCTACA
AAACCTGTTGAATCTGTATTGATGTTTTCAAGCAAATATAAGATCAACGA
CTTTGACAAAATgaatttgttcattttcaaattgaaaagaGAGTTCCAAG
AAGCTTCTGAAATGTTTGATCTTCAAAAGAAACAGGCTAAAGTTGACAAG
TCATTGTTTCGGAATGTAAGCTACTTTGATGTTATCAACAGAACAAGTCG
TTTAGGATTTAAAGATGCATGTGCCATTGCTTCAGATGCTGTAAAGCTTG
GTCTGCAGATTCTGGAAACACTTGGACCAATATCAACTTTTGATGCCATT
GAAATACTTTCAGGACAACTAGaaaaacacaaaaaaagatTCAGCACAGA
GAATGGAAAGGTGCTCAGAGATTGCAGTAACGTTTTCAACAAGTTTGAAA
CTGGTTACAGGGAAGCAGTAATCAAAGAAGGCTTTGGTGAACCAGACCGT
GTGATTCCTTTACAACCTTTTATCACCAACAAGGCACATGTTTTTCTGAC
AGATGTATTACTGcaggaaaaattaaattttcaaaggcAAAATAAAGAAC
TTCATGCCATCATGTTTGTTCAACGTAGATGTACAGCCATTATTCTATCC
CAACTCATTCAAAGAATGGTCAAATCTGATTCGAATACATATCAAGGGAT
TTCTAGTGAATATGTTTTAGGTCATGGTTTTGATGAAAACATCCGTTTGG
CAGATAGTTTCATGAAGTCTACAGAGCAAAGCAAAATCTTGACCCGATTC
AAAGCTGCCGAATTTAACGTTCTGGTGGCCACTAGTGTAGTTGAGGAAGG
TCTTGATGTTCGCAAATGTAACCTGGTGGTGCGTTTTGATGGAATCTTCA
ATTATCGAGAGTATGCACAGTCTAAAGGGAGAGCACGGGCTAAAGATTCC
AAATTTATTGTAATGGCGAGTGAGGAAGATTATGAGGACACTTCTAGACA
ACTTGAGGTAATGCAAAAAATCGAATCAGTATTATTTGACAAATGCCAAG
ACCGGGAACTACCAACAGAGGATGAGATTAGAGAGCAGATGTTCGATGAA
ATTGATGAAATGGTCAACACTATCTTCTCGGAAGATGGAAATGCAAGAAT
CAAACCTCATTACGCTGTCAGCTTGTTATACAGGTCAGGTGGAACATAGA
TGGGAGTTGATTTTTGGGATCAAGATACTTGGGTGaaagaatttaatgaa
aatgatGTTCTAGTGATGACTgcccaaattttggtcaatatACTAACCCA
TGGTTTTTTCACACGAGAAAACATTAATCTTCTAATAATGGATGAATGCC
ACAACGCAACAAAGAAACACCCGTATGTTAGGGTAATGGAATTTTTACCA
GTCACTGGTGGTCCCCATATAATGGGTTTGACTGCCTCAATAATCAatga
gaaatataaaaaatcaccAGATAAAGATTCTATCAGAGATTTTCTTGATG
ACCGTATGAAAATTTTGGAAACCACTATGCGTTCTAAGTGCATTACATGC
TCTGACCGTGAAGCTACATCAAAGTATGCTACAAAACCTGTTGAATCTGT
ATTGATGTTTTCAAGCAAATATAAGATCAACGACTTTGACAAAATgaatt
tgttcattttcaaattgaaaagaGAGTTCCAAGAAGCTTCTGAAATGTTT
GATCTTCAAAAGAAACAGGCTAAAGTTGACAAGTCATTGTTTCGGAATGT
AAGCTACTTTGATGTTATCAACAGAACAAGTCGTTTAGGATTTAAAGATG
CATGTGCCATTGCTTCAGATGCTGTAAAGCTTGGTCTGCAGATTCTGGAA
ACACTTGGACCAATATCAACTTTTGATGCCATTGAAATACTTTCAGGACA
ACTAGaaaaacacaaaaaaagatTCAGCACAGAGAATGGAAAGGTGCTCA
GAGATTGCAGTAACGTTTTCAACAAGTTTGAAACTGGTTACAGGGAAGCA
GTAATCAAAGAAGGCTTTGGTGAACCAGACCGTGTGATTCCTTTACAACC
TTTTATCACCAACAAGGCACATGTTTTTCTGACAGATGTATTACTGcagg
aaaaattaaattttcaaaggcAAAATAAAGAACTTCATGCCATCATGTTT
GTTCAACGTAGATGTACAGCCATTATTCTATCCCAACTCATTCAAAGAAT
GGTCAAATCTGATTCGAATACATATCAAGGGATTTCTAGTGAATATGTTT
TAGGTCATGGTTTTGATGAAAACATCCGTTTGGCAGATAGTTTCATGAAG
TCTACAGAGCAAAGCAAAATCTTGACCCGATTCAAAGCTGCCGAATTTAA
CGTTCTGGTGGCCACTAGTGTAGTTGAGGAAGGTCTTGATGTTCGCAAAT
GTAACCTGGTGGTGCGTTTTGATGGAATCTTCAATTATCGAGAGTATGCA
CAGTCTAAAGGGAGAGCACGGGCTAAAGATTCCAAATTTATTGTAATGGC
GAGTGAGGAAGATTATGAGGACACTTCTAGACAACTTGAGGTAATGCAAA
AAATCGAATCAGTATTATTTGACAAATGCCAAGACCGGGAACTACCAACA
GAGGATGAGATTAGAGAGCAGATGTTCGATGAAATTGATGAAATGGTCAA
CACTATCTTCTCGGAAGATGGAAATGCAAGAATCAAACCTCATTACGCTG
TCAGCTTGTTATACAGGTCAGGTGGAACATAGATGGGAGTTGATTTTTGG
GATCAAGATACTTGGGTGaaagaatttaatgaaaatgatGTTCTAGTGAT
GACTgcccaaattttggtcaatatACTAACCCATGGTTTTTTCACACGAG
AAAACATTAATCTTCTAATAATGGATGAATGCCACAACGCAACAAAGAAA
CACCCGTATGTTAGGGTAATGGAATTTTTACCAGTCACTGGTGGTCCCCA
TATAATGGGTTTGACTGCCTCAATAATCAatgagaaatataaaaaatcac
cAGATAAAGATTCTATCAGAGATTTTCTTGATGACCGTATGAAAATTTTG
GAAACCACTATGCGTTCTAAGTGCATTACATGCTCTGACCGTGAAGCTAC
ATCAAAGTATGCTACAAAACCTGTTGAATCTGTATTGATGTTTTCAAGCA
AATATAAGATCAACGACTTTGACAAAATgaatttgttcattttcaaattg
aaaagaGAGTTCCAAGAAGCTTCTGAAATGTTTGATCTTCAAAAGAAACA
GGCTAAAGTTGACAAGTCATTGTTTCGGAATGTAAGCTACTTTGATGTTA
TCAACAGAACAAGTCGTTTAGGATTTAAAGATGCATGTGCCATTGCTTCA
GATGCTGTAAAGCTTGGTCTGCAGATTCTGGAAACACTTGGACCAATATC
AACTTTTGATGCCATTGAAATACTTTCAGGACAACTAGaaaaacacaaaa
aaagatTCAGCACAGAGAATGGAAAGGTGCTCAGAGATTGCAGTAACGTT
TTCAACAAGTTTGAAACTGGTTACAGGGAAGCAGTAATCAAAGAAGGCTT
TGGTGAACCAGACCGTGTGATTCCTTTACAACCTTTTATCACCAACAAGG
CACATGTTTTTCTGACAGATGTATTACTGcaggaaaaattaaattttcaa
aggcAAAATAAAGAACTTCATGCCATCATGTTTGTTCAACGTAGATGTAC
AGCCATTATTCTATCCCAACTCATTCAAAGAATGGTCAAATCTGATTCGA
ATACATATCAAGGGATTTCTAGTGAATATGTTTTAGGTCATGGTTTTGAT
GAAAACATCCGTTTGGCAGATAGTTTCATGAAGTCTACAGAGCAAAGCAA
AATCTTGACCCGATTCAAAGCTGCCGAATTTAACGTTCTGGTGGCCACTA
GTGTAGTTGAGGAAGGTCTTGATGTTCGCAAATGTAACCTGGTGGTGCGT
TTTGATGGAATCTTCAATTATCGAGAGTATGCACAGTCTAAAGGGAGAGC
ACGGGCTAAAGATTCCAAATTTATTGTAATGGCGAGTGAGGAAGATTATG
AGGACACTTCTAGACAACTTGAGGTAATGCAAAAAATCGAATCAGTATTA
TTTGACAAATGCCAAGACCGGGAACTACCAACAGAGGATGAGATTAGAGA
GCAGATGTTCGATGAAATTGATGAAATGGTCAACACTATCTTCTCGGAAG
ATGGAAATGCAAGAATCAAACCTCATTACGCTGTCAGCTTGTTATACAGG
TCAGGTGGAACATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087_pilon | genome | sc0000087_pilon:434367..437286 + |
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