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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000268_pilon:244488..247510+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045849 ID=XLOC_045849|Name=XLOC_045849|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3023bp|location=Sequence derived from alignment at sc0000268_pilon:244488..247510+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCTATCTTTATTTCTTGGATTGCTGTTTGCAGTCACCACGCCTTG
TTCAAGTCACCTTACAAAGCATTACATGTCTCATAAAGAACTTGAAAATC
ATCTGCAGAGCTTGACATCAATGTTTCCCGATATTTCCCGAGTATACAGT
ATCGGGGAGAGCGTAAAAGGAAGAAGTTTACTTGTTATGGAAATTTCATC
GAACCCTGGCGAACACGAGTTTCTGGAACCAGAATTCAAATATGTTGGTA
ACATGCACGGAGATGAGACAGTGGGTCGGCAAATTCTTTTGAACTTAATT
GAACTGTTGTTGTGGAACTATACTTCCAACCCTGCGATCAAACAACTGGT
TGATACAACAAGGATACACATTCTCTGCACCATGAATCCTGATGGTTTCA
ACAAAGCACAAAAAACACAAAACGATTATTTACCAGATGGCCGGAACAAT
GCAAATAATGTCGATTTGAACAGAAACTTCCCAGACCCTTTTGTGCCATC
ATATTTCAGTAAGGTTCGAATGCAAAAAGAAACAAAGGCAGTTATAGACT
GGCTGCATTCACTCCCATTCGTTCTCTCCGCTAACTTGCACGGTGGAGCA
GTCGTGGTAAACTATCCTTATGATAACTTCAAAGAGTTTCAGCGTTATTT
ATTTTTCGGTCGTTCGATTTATGCCGGGACTCCAGATGATGACGTTTTCA
AGTAAGTTTGAATCTCTTATCCcacgaaatttttaaaagaaaaatgatgt
TTTATTGTCTATGTATGAAACACTACCCCTCGCACCACACAATGTTGCAA
AATGGCTACAATGGAACTGACTGtaaatttctttgtttctcCTGCTTCTT
TGAGCTTTAAGAATATAGAATCTTTTAAGTTTTAAAGTCTCACTTGCTAA
AAACATTTAGACCAAATTTATCTCAGTGAAAAGGGTTCAGGGACGCTTAC
TTTCAAATTTGACATTTCTTTATCCAACAGACCTCTTATTTTTTCACGAT
AGATCGATTTCGAAGACGTATTCAAAGAGTCATCATAACATGAGTAAAGG
GAAACATTGCGGAGAAGACAAGTTTGTTGATGGAATCACTAATGGTGCAG
AATGGTAAGTCTTTGGTATTTTGAATGATCTTTCTTTGAGCGAGACGTGG
CAGTGAACTACAAATTCCATTctcgtttttgaaaaaaaaaacgaaatggt
catttcaattttttttgtcatctaaGTCTTAGACCGAGTAGACTTCTGtt
ttacattgaaaatttttatgagcCACCTCTAGTGGAGTCCCTGATCACTT
AACTGAGTTTACTTATCTTTCATTTCAATCAGATAGATAAAGAAAAGAAG
TGTAAAAATTATTTGCTTTGCCTTCATTATAGGTACACAGTGAGTGGAGG
GATGCAAGATTACAATTATCGATACACCAACTGTTTTGAAATCCTGATCG
AGCTAAGCTGTACAAAATTGGTCCCTGAAAAAGACCTTCTTATGTATTGG
GAACACAATCGAAAAGCACTGTTGAGTTATCTCGCTCGTATTCACATGGG
AGTCAAAGGTATGCaaaaaaaGTTTCGAACTGCTATTTCTATTTTCAGCA
GATCTGTATTATGTATGCAATAggcatttccaaaatttggaaatattttg
aaaatatgatatttcagatttggaaatattaatacaataatgaccggtta
gtgagggctgtactgagaaatattgcccgaggtcaagtaacgaccgagct
tgcgaggttgttgcgttgaccgagggcaatattttcagtacagcccgaaa
aaaaccggtcattattgtatttgttaaccgtttccttcaactttgattga
tttttagcgctttatccaggaaaaatagggaaataaagcagaaaaaacaa
gcgaaaagagataaaaaattgctataatttctgacgtcagaaataaaaaa
taagagaaatgatgtcaacgcattgttcattttcctttgaaaaagtgacg
tcacaatgaattttcctaacgacgggcaactctggacaatgtaggcccgt
cgtcatgcgaaatgGACCAATTGCAGtgcgcaaaaagccatgtagcccgc
ttcgaaaaagtaaccggttaacaacaTGAAATATGACATTTcctcaactt
tggaaatatagaaaagttatACTTCGATATTTACACatgtatatggaaat
atcatattttcaagatatttccaggattggaaatctttTATTTCGCCTAG
TGTTATTTTGAGTGCGATGAATGCCTTGTTTTGCTGGAACCATTACCAAT
GTTACTAAATCCCTTGGGTCATATTAATAGTGTAAACTTCTTATGAACCC
TTGGGAATCAatcaccatagcaatattttgaaaacgaggtaagtgatTCT
CGTGAGgcaatttataaaaaggtcctattatttgtgattttttgacttcT
TTGTGAGCTTAAAGTATTATATAGAGAAAATAAAACCTATTCCCGGTCCC
TTCCTTCACCTTTTGTGATAGCGCTCATAAATATGGTAATACTAAATTAA
TACGAGCAGCTCTTTTCGAGTTTGGAAGGAAATCATTATTGAGGATAAAA
TCATTTCCTCGTGAATTTCAACATCCGACTCTATTTTGATGAATTATTCG
TAGAATATTTGATAGAGAATTTCATTTCCGTTTCTCACTTTCATGtttat
caaattaatttttaattatttttcaagggGTTGTTCTGACACATGACCAT
GAACCAATCGAAGGTGCAAAGATTCTAATCCACGATcgaacaaaagaaat
caaaacatggAGAACTGGGGAATATTGGCGATTATTGTTGCCTGGAAACT
ATCAGCTCGAAGTTTCGGCTGACGGTTATTTTACTCAATGGAAAAATATC
ACTGTTACAGAAGGAGAAGTGACGAGAAtggattttaatttatttgagaG
TGCATCGTTGAGAATTTCACCTGCAACGAGCATTCTTTTTGTACATATGA
TTATTGCATTCCTGCTAGCTTGA Coding sequence (CDS) from alignment at sc0000268_pilon:244488..247510+ >XLOC_045849 ID=XLOC_045849|Name=XLOC_045849|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2550bp|location=Sequence derived from alignment at sc0000268_pilon:244488..247510+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCTATCTTTATTTCTTGGATTGCTGTTTGCAGTCACCACGCCTTG
TTCAAGTCACCTTACAAAGCATTACATGTCTCATAAAGAACTTGAAAATC
ATCTGCAGAGCTTGACATCAATGTTTCCCGATATTTCCCGAGTATACAGT
ATCGGGGAGAGCGTAAAAGGAAGAAGTTTACTTGTTATGGAAATTTCATC
GAACCCTGGCGAACACGAGTTTCTGGAACCAGAATTCAAATATGTTGGTA
ACATGCACGGAGATGAGACAGTGGGTCGGCAAATTCTTTTGAACTTAATT
GAACTGTTGTTGTGGAACTATACTTCCAACCCTGCGATCAAACAACTGGT
TGATACAACAAGGATACACATTCTCTGCACCATGAATCCTGATGGTTTCA
ACAAAGCACAAAAAACACAAAACGATTATTTACCAGATGGCCGGAACAAT
GCAAATAATGTCGATTTGAACAGAAACTTCCCAGACCCTTTTGTGCCATC
ATATTTCAGTAAGGTTCGAATGCAAAAAGAAACAAAGGCAGTTATAGACT
GGCTGCATTCACTCCCATTCGTTCTCTCCGCTAACTTGCACGGTGGAGCA
GTCGTGGTAAACTATCCTTATGATAACTTCAAAGAGTTTCAGCGTTATTT
ATTTTTCGGTCGTTCGATTTATGCCGGGACTCCAGATGATGACGTTTTCA
AATGTATCTATCTTTATTTCTTGGATTGCTGTTTGCAGTCACCACGCCTT
GTTCAAGTCACCTTACAAAGCATTACATGTCTCATAAAGAACTTGAAAAT
CATCTGCAGAGCTTGACATCAATGTTTCCCGATATTTCCCGAGTATACAG
TATCGGGGAGAGCGTAAAAGGAAGAAGTTTACTTGTTATGGAAATTTCAT
CGAACCCTGGCGAACACGAGTTTCTGGAACCAGAATTCAAATATGTTGGT
AACATGCACGGAGATGAGACAGTGGGTCGGCAAATTCTTTTGAACTTAAT
TGAACTGTTGTTGTGGAACTATACTTCCAACCCTGCGATCAAACAACTGG
TTGATACAACAAGGATACACATTCTCTGCACCATGAATCCTGATGGTTTC
AACAAAGCACAAAAAACACAAAACGATTATTTACCAGATGGCCGGAACAA
TGCAAATAATGTCGATTTGAACAGAAACTTCCCAGACCCTTTTGTGCCAT
CATATTTCAGTAAGGTTCGAATGCAAAAAGAAACAAAGGCAGTTATAGAC
TGGCTGCATTCACTCCCATTCGTTCTCTCCGCTAACTTGCACGGTGGAGC
AGTCGTGGTAAACTATCCTTATGATAACTTCAAAGAGTTTCAGCGTTATT
TATTTTTCGGTCGTTCGATTTATGCCGGGACTCCAGATGATGACGTTTTC
AAATCGATTTCGAAGACGTATTCAAAGAGTCATCATAACATGAGTAAAGG
GAAACATTGCGGAGAAGACAAGTTTGTTGATGGAATCACTAATGGTGCAG
AATGATCGATTTCGAAGACGTATTCAAAGAGTCATCATAACATGAGTAAA
GGGAAACATTGCGGAGAAGACAAGTTTGTTGATGGAATCACTAATGGTGC
AGAATGGTACACAGTGAGTGGAGGGATGCAAGATTACAATTATCGATACA
CCAACTGTTTTGAAATCCTGATCGAGCTAAGCTGTACAAAATTGGTCCCT
GAAAAAGACCTTCTTATGTATTGGGAACACAATCGAAAAGCACTGTTGAG
TTATCTCGCTCGTATTCACATGGGAGTCAAAGGTACACAGTGAGTGGAGG
GATGCAAGATTACAATTATCGATACACCAACTGTTTTGAAATCCTGATCG
AGCTAAGCTGTACAAAATTGGTCCCTGAAAAAGACCTTCTTATGTATTGG
GAACACAATCGAAAAGCACTGTTGAGTTATCTCGCTCGTATTCACATGGG
AGTCAAAGggGTTGTTCTGACACATGACCATGAACCAATCGAAGGTGCAA
AGATTCTAATCCACGATcgaacaaaagaaatcaaaacatggAGAACTGGG
GAATATTGGCGATTATTGTTGCCTGGAAACTATCAGCTCGAAGTTTCGGC
TGACGGTTATTTTACTCAATGGAAAAATATCACTGTTACAGAAGGAGAAG
TGACGAGAAtggattttaatttatttgagaGTGCATCGTTGAGAATTTCA
CCTGCAACGAGCATTCTTTTTGTACATATGATTATTGCATTCCTGCTAGC
TTGAggGTTGTTCTGACACATGACCATGAACCAATCGAAGGTGCAAAGAT
TCTAATCCACGATcgaacaaaagaaatcaaaacatggAGAACTGGGGAAT
ATTGGCGATTATTGTTGCCTGGAAACTATCAGCTCGAAGTTTCGGCTGAC
GGTTATTTTACTCAATGGAAAAATATCACTGTTACAGAAGGAGAAGTGAC
GAGAAtggattttaatttatttgagaGTGCATCGTTGAGAATTTCACCTG
CAACGAGCATTCTTTTTGTACATATGATTATTGCATTCCTGCTAGCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000268_pilon | genome | sc0000268_pilon:244488..247510 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 982-1275:2730 |
| Aaloc | 805-978:1384 |
| Aaloc | 703-801:1004 |
| Aaloc | 1-699:1 |
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