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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000268_pilon:462876..467848+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045841 ID=XLOC_045841|Name=XLOC_045841|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4973bp|location=Sequence derived from alignment at sc0000268_pilon:462876..467848+ (Clytia hemisphaerica_ch_hm2_pilon)
tattgattTACAAGTTTGTTCGAACATAAAAGCATAATGGCCGGCGAAGA
GTCAGGTGGTTACGAGTTTAAAACAAAAGGGAAATTACCAACACGTTGTC
AGTGTTTAATTTGCCAAGAGTTGTTAAAACAATGTGTTGAACTTCCCTGC
CGTCATCCATTTTGTAGCAGCTGTTTGGTGAGATGGGAAGATCAAAAACG
AAAAGAGAGGAAAGGCCTTGAGCAGtatgttttatcttttttattcatAA
CAATTGAAGATTTCATGTCTTTAGGGGGGATGTTCTATATTTAGGAGAGG
GTGCCAAAATTATATTGACTGGTGAgggggggAGGGACTTGAAATCTTTC
TGAGGATATCAAGAGGGTGGGAATTTTATTGGCATTTTTGTAAATATCCT
CCGCCCCACCCTAGTatatactttctgaccactccctaacaGTTACCTCG
CAAATAAACATTCCAGCAATCTGCTTTTCCTTTTACAGAGAGAGACCCTT
CAGGTGTATGCTTTGTAATCAAGAATATCAGATTCAAGAAGTAAGTCACT
CTTTCGTATGGTTTCTTATTAGTTTTCTACTTTCCATAAATGATTAAGTA
GTTTTTCCTAAAACCTTCCCAATTATCGTTATTTATTTTGTATCGGAAAT
TTGCGCCCTCGATCCCTTACACTTTAGCTCGCCTTAATTTCTAATTTTca
gtgcaaaaaaaattattttggctCTTCTAAAAAATCCCCTGTGTCAGAGG
ACCCCCtaaccactgaaaaatttggctaaaacttCGTCTCCGGTGGGGAA
AACATCCTATACAATTTCAACCCCtctgaaaaatttactttgttttcatc
ctcatttgaaattcaatggaaataCATTAATTTCCGAAATCATCCCCGCT
AGAttttttGGGAACAATGCGAAATTACCATTTCCAtcgggatttcgata
gaaaccTTTATCGCACCATTAAGATAAGAAGTTTCACCGGGACTGTTAGA
CAGGGAAACATCTTTCAGATGGATTTTTGTACTTGTTTGTTATTTCCACA
TATTAAAACATCATATAAGATTTATCTTACggtaatgaaatttaaagaaa
tataacttttattgCATCTGCTTTATTTAACAGAAGAGAAACAACACAGT
CGTTGACAACATTATCACTGAAGATATAGAAGTTTTGTGCAAACACCATG
AGCAAGGATGTCCGTGGACTGGTGCTATCAACGATTTTATGGTATATGGt
tccaatgttttgatttaattccTTGAAATATTTTGACAGACTTAAAAAAT
TTAGGGAAACTGAACATATGCTTTTTTCACATACATGTAAAGTCTTACTT
AATACCTTATGGTCTGGGAATTTACCCAACATCACATAGATTTTTTATCg
tttggggaaattcccaaaagacagcctttcGAACAATTTTCCGTAAGGTC
Ttaaaagggacattacagtagtaacaagaatcgcaaaattgcgactaaat
atttccttaaaaatgaaggtcattattgacatatataaaaaggGATAATT
AGCCTTAGTAAAAGAAAGCAAGGTGAGAGTTACAAGTTACAATTCCAAGT
CTTAAGTTGTTCAACAACTCTACAAATGTCGTGTCACCCTATTGAGGGTG
AGCTTTTATCgtgagaaaataatattttaatccacgcaagtggtaaaaaa
tacttagagaaaatggtactatgaaagcccattctatactcctaaatgat
agttgaaagatcagcagttgagagggttgattaaaatagaaatcaaagca
cacataataagtatacatatatatttgtccagaaagaactggcatgttgt
ttgctttgtttggtatttaaaaatatgtactcatcagtcctaaaaaaaat
aaaaatttgaatataatgagggcaataagtctggtttaaatgttacttta
ttcacaagatttaaggattactgaaaaaatactactgcagatgaactaaa
ctcaaaaactaaaactttacaataaatttacattaggacaaagtaaaaat
ctatctttaatagcaacaaagaaaagaatatgcctcaaagttttaaagca
tttaaatagctttaaacagagctagtcagagcttcaattcagttcagtag
gtatagagaattcaagatttgaaaacagacactgcattggtttacaagac
tagagaaagatgtcaaccatccacacggttcatgaaaaaaataaagtatt
tatcaaaaaaaggttctcttttttttggaaatcaattccaacaaacaaca
atcaagatACCCTAAcaggcagtgtagacctaactcttcatacaaaaatt
acgggaaacgcatatttggactttgtaccctatgctgcactcaagcactt
gagccaaaatcccgcaaaggcgggacaaaaatcagttttttgaagtttgc
aaaaaaacgccacatagaagatctttcaaattcagtatgtgaatagagca
gtaaaaaatacaacttttctatttttccttttttttgcaaaagttctagg
aatgaaaataaagggataatgataattgaatactatccattgatgatccg
cggcactatcgtaaagctagaatcgcttagcgtactcttcgcttgagaaa
atgattgacagattgaagtttttcatccccgcggtgCGCGGCGCCCGGGA
GCTCTGGCgctctgcgagagttctcggctcaatcctcggaccgcgctaaa
aatggtagactgagctgtgatagatcatttcgatggaagttgttggaatg
tttacaaggctcttgacagaatattgtttgttttattgtcaatgatgaca
gtgccgttataaattttgttagatctgacaaattgatgtttgtaagtgca
ctttatagttttgattcccattgaagaatcatattctggttttcatgtta
ttagatgctgttttagagctttaggtctacactgacagGATCCACGGTGT
AAACAACAACAAAACCCACACCACCAAAATTGTAAAAATAAGTCAATATA
ATTTCTATCAACAATTTCTCGTCGTCGTAAGATGTTTTTTTTCCAAAATT
CTGATACCAATCATGGCTGGAGTCATCATGTGTAGGAAACAAAACTGTGT
ATAACAACAAAAGTTTATTtgaaaatcatcccacggtcatggtaaagcta
aagatttatcaaccaaacaaaactgacgccaagtcaaatctgtcgattac
aatcacaatcgaaacttatctcataaaatgcttttttcaacattctggag
ggtTCAAAGTTAGATGTATCATATGTaaagccaagcaatacatgaaaagt
catttgctatcccatttgccatgagatatatgagtcaagaaatcaaacaa
aaaccaacaaatcaaaaaaccaacaagtctcttcactttcatgtcacatc
gtgtttatatggggtaaccagaaagtcattccacaagaacagccatctcc
ctttattatggagtgttccaaaactattggtaggttgtttggaagtaaag
aaacccacacagtttgatttattttaaagattttaacttgaaaacaaact
gcatctttctagcagcaaatactcatgtttcaacctgctacataacaatt
gccagtcgggtctgctactaacatgtaatagttttattataactgggctt
gagaatccgtaaggaacttgtaacatatatatatatagtttatcagtcga
cttgaatcacgATGCATTACTTATAATTCACTGGATGCATCTTTcgctgt
gaaaataaaaacgggcgtcagtcagggcgtacggaaggcgttttgacacg
ggaaattatggagaaagcccgttttaataaatatttcccttttggaaagc
gggaaatatttaaaaagtaaacattgcgcgaaccacgtgtcattaaagag
aacaattaaaatcacgtgtccaaaacaaacttgtaaaacaattgaacaat
caaaattagccatatttggtttgattttttattttgacatgtgacatttg
ttttgattttgtatccgctgcatacagtttgtttacaaatttcgcaagta
ctgttatgtccctttaagtaaaactttaaaaaactttttgaacgtatgCA
AACTCTAcacaaagcttttttcacatgtacgtaaaattttacttaagacc
tttaagggtggggaatttccctaagcttacgtagtgttttaaggctttat
gtagagtttgcttacgttcaaaaagttttgaacggaaataaaaagtcacg
taagacccgggCACTGGGTTTGCGAACTGACGGTATGTGCGGGCCAAAAA
TTGGCTTTTAAAATTGCACCCTTACAGTGCAGCAAAAATCAGTGAAAATC
ATACCCTTAAagtgcatttccctccaaattttcgatccctttcgtgcaaa
aaatggtcaaaattctagtatttttggttaaaatatctagaattttcaag
aattttctgaaatttctacccttacagtgcatctttagtttttccgaccc
ttacagtgcattttaaacatattggaaaaggtacccttaggacctgcaca
tacccgtcggtccttttgcccagctgccccccccccccgggcataagacc
ctcttaatcaacaaaaactctacataatgtcggggaaattcccaaaagac
agccttacgaacgattttccgtaaggtcttaagtaaaatgCGAGAAGAAA
TGCGAGATCAGCAAGTTTTAttgaaagatatattttcttcGTTTTATGTA
ATCAAATCCTTTTTCAACAGCAACACGCCAACACAGATTGTCCATACGTC
GAAATAACGTGTCATTTTATGGGATGTGACGTTCGCTTCTTACGTAAAGC
GAAACAACAACACGAACAAAATTGTCCGATGAAAGAGGTGAACTGCGTGT
ACTGTCAAATGGCTTTTAAAGAA Coding sequence (CDS) from alignment at sc0000268_pilon:462876..467848+ >XLOC_045841 ID=XLOC_045841|Name=XLOC_045841|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1074bp|location=Sequence derived from alignment at sc0000268_pilon:462876..467848+ (Clytia hemisphaerica_ch_hm2_pilon)
tattgattTACAAGTTTGTTCGAACATAAAAGCATAATGGCCGGCGAAGA
GTCAGGTGGTTACGAGTTTAAAACAAAAGGGAAATTACCAACACGTTGTC
AGTGTTTAATTTGCCAAGAGTTGTTAAAACAATGTGTTGAACTTCCCTGC
CGTCATCCATTTTGTAGCAGCTGTTTGGTGAGATGGGAAGATCAAAAACG
AAAAGAGAGGAAAGGCCTTGAGCAtattgattTACAAGTTTGTTCGAACA
TAAAAGCATAATGGCCGGCGAAGAGTCAGGTGGTTACGAGTTTAAAACAA
AAGGGAAATTACCAACACGTTGTCAGTGTTTAATTTGCCAAGAGTTGTTA
AAACAATGTGTTGAACTTCCCTGCCGTCATCCATTTTGTAGCAGCTGTTT
GGTGAGATGGGAAGATCAAAAACGAAAAGAGAGGAAAGGCCTTGAGCAAG
AGAGACCCTTCAGGTGTATGCTTTGTAATCAAGAATATCAGATTCAAGAA
AGAGAGACCCTTCAGGTGTATGCTTTGTAATCAAGAATATCAGATTCAAG
AAAAGAGAAACAACACAGTCGTTGACAACATTATCACTGAAGATATAGAA
GTTTTGTGCAAACACCATGAGCAAGGATGTCCGTGGACTGGTGCTATCAA
CGATTTTATGAAGAGAAACAACACAGTCGTTGACAACATTATCACTGAAG
ATATAGAAGTTTTGTGCAAACACCATGAGCAAGGATGTCCGTGGACTGGT
GCTATCAACGATTTTATGCAACACGCCAACACAGATTGTCCATACGTCGA
AATAACGTGTCATTTTATGGGATGTGACGTTCGCTTCTTACGTAAAGCGA
AACAACAACACGAACAAAATTGTCCGATGAAAGAGGTGAACTGCGTGTAC
TGTCAAATGGCTTTTAAAGAACAACACGCCAACACAGATTGTCCATACGT
CGAAATAACGTGTCATTTTATGGGATGTGACGTTCGCTTCTTACGTAAAG
CGAAACAACAACACGAACAAAATTGTCCGATGAAAGAGGTGAACTGCGTG
TACTGTCAAATGGCTTTTAAAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000268_pilon | genome | sc0000268_pilon:462876..467848 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 385-537:4821 |
| Aaloc | 277-384:1134 |
| Aaloc | 226-276:490 |
| Aaloc | 1-222:1 |
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