|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000268_pilon:445407..448175+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045832 ID=XLOC_045832|Name=XLOC_045832|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2769bp|location=Sequence derived from alignment at sc0000268_pilon:445407..448175+ (Clytia hemisphaerica_ch_hm2_pilon)
TCACCTCCGATACGTTCTTCTCCCGTCGACGCCCCTGTTCAATACCAGCC
ATTATCACGAAGTATGCCGCCCAGAGATGAAGCCAAGAAACCGATCATCA
AGTCTCCCAGAGTTCACGAAGAGCACAGATTGAGGCGGTCGCGCTCTCCT
GTTTCTTTCCCAGATAGGCAAGAAAAAAGACGTGTGCAAGACGAACCAAC
TCTCAAACGTAGCGCGGAAACGATCCCTGTTGCGAATGAATTATCATCAC
CCTCCAAAGCCAAGAAATCGAAACCAGCAGAAGTTGAACGACCAGTCATC
GAAATCTCAACCGAAGCAGTACGACAAAACTCTCAGCAGCAACAACAACG
CAAACAGCCAGCTCGCAAGAAGGGATTGGGGTTGCTGGAGATGAAAATCC
AAGGGCTGAAAGAGAAAATGGAACAGTCCGGTGTGTCCGACAAAATCAAA
GAGAAAATGAATTCCCAACCAGAATCAACGGAAAAGAAGGAACCTTCGAA
AGCCATGGAGACATCCCCCGCTCCCTCTATTCCCAAACCAACAAAGAGGC
TTTCAGACGTCATCTCTAACTTAACACAGGAGAAAGGAATGAAGGAACCG
GTTTCTAAGCCACCTGGTAAACGTTCCAAGTCTCTTGCAGACATCACTAA
AGATCTTGCTAAATCTGTCGAGAAAAGTAGCGTTCTCGATTCGTCACTTG
CTGTATCTTTCTCAAAGAACAAGCCCACCGTAAATTCAGTGTCATTCAAC
AAACCATCTAAACCTGTGACCAGTTCCAGCAAGCTCTCTGACGTCATTTc
cactttaaaagaaaaatcgaaGGCTGCCTCTGCTCAATTACCGACATCCA
AATTCAAAGGTGTTCCCTTAACTGTGAAACCATCAAACGATTCCAAACtg
ctaaatattttaaaaagtggAAATGCCGATAAAAGTCCAAGGGCATTGCA
AAAGAAAGACTCACCTGAAGAAACGCCCACTAGTCCACCGCCTCGGAGAG
CGTCAGTTATCTCTTCAGTTATTTGCTCAACCATCAAATCGCCTGTTGAA
AAGAATGCTGAAGGTCATCCACCAGAACTCCAGTCAGTATTAAAGTCTCC
GCCGTTGGAAAGAATGAAATCGCCTTTGGAAAGACCGAACTCGCGTTCAG
AGAGGATTCGATCTCCGCCCTCAGACAGATTGACTTCATCACGTCAAACA
CGAAGATCATCCACTGCCGACAGACCTTTCTCGCCATCTGATAGGCTACT
TTCGCCAACTTCAGGAATACTTCACTCTCAATACGATCAGCTACCAGAGT
CACGTCCAAAAGACCGTTATCCACCAAGAGATGCATCTCCATCTGCAAGA
GATTTCCTACCTTATGACACTTATCGCTCATTTAAAAGCTCGTCTTCTGA
AAGAATCGTTTCGCCGCGCGACCACCCAATCGAGAGAATAGTTTCGCCGC
GCGACCACTCAACTGAACGGCTCTTCTCGCCACGATCATCGAGAAATTCT
GAACGAATTACGTCACCTCGCGGACCTTCACCGTTAGACTTGACCCCTTC
ACCACGATCGTCAAGGAAACCTTCACTCGATGTCCCTGCAAGAGATCCGT
CACCTCGATCATCCGGTCGGCAATCGTCTTCCATTTCTCCACGGGAACCT
GTCATCCACTCACCAGACAACAGACCACCTCACTCATTGAGACTTCTCTC
ACCTTCACAATCAGAGAGACTGACCTCACCACCACCCTTGACCAGGGTCA
CTCCTCCATTGGAGAAACTTTCATCTCCAAGATCGAAACACTCATCACCG
TTGATTGATCGAAGACCGTCTCCGTTGGAGAGTGTTATTTCACAAAACAC
AAGTAGAATGAAATCACCAACCGACCGAACGTCTTCCCCTTCTTCGAGAG
CTAAATCGCCTATTCCGAGGGAAGCACCGCCACTCGACCGCATAAAATCC
CCAAAGAATCATCCAACTCCACCCGCGAGAGAGTTTGCTTCTCCTGGACA
TGGAATCACTTCGCCAGTCCTCCGCATGAAATCACCACGACCAATGGAAG
GCCCCCCTCCTCTTGACCGAGTTGTCTCGCCAAACTCCGAAAGACTCGGA
TCAACACCTTATGAACACGCCAATCTTTCTAAGGATCGAATCAAATCACC
TGTGGACAGGCTTTCGCTAAGTGAACCACGCTCTTCACCGATAGCGGACC
GTGTAATGTCACCACGAATCAAGTCTGCCAGCGTCATTTCTTCAACAGGG
AGCAAGACTTCGGAACGCCTTCTTTCGCCCACTAACAACAGACGAACGCC
CAATATCACCTCACCGCCACCCTTCTCGCGCGCTGAGAACGATATTCAAT
CAAAGCATTCTCCCAGTAACCGTGGAACACCTGGAGATGAGAGACTGATG
GGTGAACGATTCCAATCGCCGATCAGTAGTCCGGTATATTCACCGGCCGT
TGTGAGCAACCCTTTAACAATCGACTTGGAAAAGAAGAAGATCTCTTCAG
GGCGTGAAAGCGCCACCCTGCAAGTTATAACGCCTACACGAACACCCACT
CCAATTAAGTCGCCTCTCACACAAACATTACAGGTTGTCACTTCGCCACG
TCATGAGAATTCAATGTCGCCCTCTTTTCCCGCCTCACCGCCCCAATTAG
TCGATAAGGCGGTTTTGTCCTCGCAATTGACAAGGCCTACGGCGATTGTT
GCCACGACAACAGCGAATAATGAATCGGTCGATCACGTGACTAAAACAGA
CGGAAAAGCATCATCTTAA Coding sequence (CDS) from alignment at sc0000268_pilon:445407..448175+ >XLOC_045832 ID=XLOC_045832|Name=XLOC_045832|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5538bp|location=Sequence derived from alignment at sc0000268_pilon:445407..448175+ (Clytia hemisphaerica_ch_hm2_pilon)
TCACCTCCGATACGTTCTTCTCCCGTCGACGCCCCTGTTCAATACCAGCC
ATTATCACGAAGTATGCCGCCCAGAGATGAAGCCAAGAAACCGATCATCA
AGTCTCCCAGAGTTCACGAAGAGCACAGATTGAGGCGGTCGCGCTCTCCT
GTTTCTTTCCCAGATAGGCAAGAAAAAAGACGTGTGCAAGACGAACCAAC
TCTCAAACGTAGCGCGGAAACGATCCCTGTTGCGAATGAATTATCATCAC
CCTCCAAAGCCAAGAAATCGAAACCAGCAGAAGTTGAACGACCAGTCATC
GAAATCTCAACCGAAGCAGTACGACAAAACTCTCAGCAGCAACAACAACG
CAAACAGCCAGCTCGCAAGAAGGGATTGGGGTTGCTGGAGATGAAAATCC
AAGGGCTGAAAGAGAAAATGGAACAGTCCGGTGTGTCCGACAAAATCAAA
GAGAAAATGAATTCCCAACCAGAATCAACGGAAAAGAAGGAACCTTCGAA
AGCCATGGAGACATCCCCCGCTCCCTCTATTCCCAAACCAACAAAGAGGC
TTTCAGACGTCATCTCTAACTTAACACAGGAGAAAGGAATGAAGGAACCG
GTTTCTAAGCCACCTGGTAAACGTTCCAAGTCTCTTGCAGACATCACTAA
AGATCTTGCTAAATCTGTCGAGAAAAGTAGCGTTCTCGATTCGTCACTTG
CTGTATCTTTCTCAAAGAACAAGCCCACCGTAAATTCAGTGTCATTCAAC
AAACCATCTAAACCTGTGACCAGTTCCAGCAAGCTCTCTGACGTCATTTc
cactttaaaagaaaaatcgaaGGCTGCCTCTGCTCAATTACCGACATCCA
AATTCAAAGGTGTTCCCTTAACTGTGAAACCATCAAACGATTCCAAACtg
ctaaatattttaaaaagtggAAATGCCGATAAAAGTCCAAGGGCATTGCA
AAAGAAAGACTCACCTGAAGAAACGCCCACTAGTCCACCGCCTCGGAGAG
CGTCAGTTATCTCTTCAGTTATTTGCTCAACCATCAAATCGCCTGTTGAA
AAGAATGCTGAAGGTCATCCACCAGAACTCCAGTCAGTATTAAAGTCTCC
GCCGTTGGAAAGAATGAAATCGCCTTTGGAAAGACCGAACTCGCGTTCAG
AGAGGATTCGATCTCCGCCCTCAGACAGATTGACTTCATCACGTCAAACA
CGAAGATCATCCACTGCCGACAGACCTTTCTCGCCATCTGATAGGCTACT
TTCGCCAACTTCAGGAATACTTCACTCTCAATACGATCAGCTACCAGAGT
CACGTCCAAAAGACCGTTATCCACCAAGAGATGCATCTCCATCTGCAAGA
GATTTCCTACCTTATGACACTTATCGCTCATTTAAAAGCTCGTCTTCTGA
AAGAATCGTTTCGCCGCGCGACCACCCAATCGAGAGAATAGTTTCGCCGC
GCGACCACTCAACTGAACGGCTCTTCTCGCCACGATCATCGAGAAATTCT
GAACGAATTACGTCACCTCGCGGACCTTCACCGTTAGACTTGACCCCTTC
ACCACGATCGTCAAGGAAACCTTCACTCGATGTCCCTGCAAGAGATCCGT
CACCTCGATCATCCGGTCGGCAATCGTCTTCCATTTCTCCACGGGAACCT
GTCATCCACTCACCAGACAACAGACCACCTCACTCATTGAGACTTCTCTC
ACCTTCACAATCAGAGAGACTGACCTCACCACCACCCTTGACCAGGGTCA
CTCCTCCATTGGAGAAACTTTCATCTCCAAGATCGAAACACTCATCACCG
TTGATTGATCGAAGACCGTCTCCGTTGGAGAGTGTTATTTCACAAAACAC
AAGTAGAATGAAATCACCAACCGACCGAACGTCTTCCCCTTCTTCGAGAG
CTAAATCGCCTATTCCGAGGGAAGCACCGCCACTCGACCGCATAAAATCC
CCAAAGAATCATCCAACTCCACCCGCGAGAGAGTTTGCTTCTCCTGGACA
TGGAATCACTTCGCCAGTCCTCCGCATGAAATCACCACGACCAATGGAAG
GCCCCCCTCCTCTTGACCGAGTTGTCTCGCCAAACTCCGAAAGACTCGGA
TCAACACCTTATGAACACGCCAATCTTTCTAAGGATCGAATCAAATCACC
TGTGGACAGGCTTTCGCTAAGTGAACCACGCTCTTCACCGATAGCGGACC
GTGTAATGTCACCACGAATCAAGTCTGCCAGCGTCATTTCTTCAACAGGG
AGCAAGACTTCGGAACGCCTTCTTTCGCCCACTAACAACAGACGAACGCC
CAATATCACCTCACCGCCACCCTTCTCGCGCGCTGAGAACGATATTCAAT
CAAAGCATTCTCCCAGTAACCGTGGAACACCTGGAGATGAGAGACTGATG
GGTGAACGATTCCAATCGCCGATCAGTAGTCCGGTATATTCACCGGCCGT
TGTGAGCAACCCTTTAACAATCGACTTGGAAAAGAAGAAGATCTCTTCAG
GGCGTGAAAGCGCCACCCTGCAAGTTATAACGCCTACACGAACACCCACT
CCAATTAAGTCGCCTCTCACACAAACATTACAGGTTGTCACTTCGCCACG
TCATGAGAATTCAATGTCGCCCTCTTTTCCCGCCTCACCGCCCCAATTAG
TCGATAAGGCGGTTTTGTCCTCGCAATTGACAAGGCCTACGGCGATTGTT
GCCACGACAACAGCGAATAATGAATCGGTCGATCACGTGACTAAAACAGA
CGGAAAAGCATCATCTTAATCACCTCCGATACGTTCTTCTCCCGTCGACG
CCCCTGTTCAATACCAGCCATTATCACGAAGTATGCCGCCCAGAGATGAA
GCCAAGAAACCGATCATCAAGTCTCCCAGAGTTCACGAAGAGCACAGATT
GAGGCGGTCGCGCTCTCCTGTTTCTTTCCCAGATAGGCAAGAAAAAAGAC
GTGTGCAAGACGAACCAACTCTCAAACGTAGCGCGGAAACGATCCCTGTT
GCGAATGAATTATCATCACCCTCCAAAGCCAAGAAATCGAAACCAGCAGA
AGTTGAACGACCAGTCATCGAAATCTCAACCGAAGCAGTACGACAAAACT
CTCAGCAGCAACAACAACGCAAACAGCCAGCTCGCAAGAAGGGATTGGGG
TTGCTGGAGATGAAAATCCAAGGGCTGAAAGAGAAAATGGAACAGTCCGG
TGTGTCCGACAAAATCAAAGAGAAAATGAATTCCCAACCAGAATCAACGG
AAAAGAAGGAACCTTCGAAAGCCATGGAGACATCCCCCGCTCCCTCTATT
CCCAAACCAACAAAGAGGCTTTCAGACGTCATCTCTAACTTAACACAGGA
GAAAGGAATGAAGGAACCGGTTTCTAAGCCACCTGGTAAACGTTCCAAGT
CTCTTGCAGACATCACTAAAGATCTTGCTAAATCTGTCGAGAAAAGTAGC
GTTCTCGATTCGTCACTTGCTGTATCTTTCTCAAAGAACAAGCCCACCGT
AAATTCAGTGTCATTCAACAAACCATCTAAACCTGTGACCAGTTCCAGCA
AGCTCTCTGACGTCATTTccactttaaaagaaaaatcgaaGGCTGCCTCT
GCTCAATTACCGACATCCAAATTCAAAGGTGTTCCCTTAACTGTGAAACC
ATCAAACGATTCCAAACtgctaaatattttaaaaagtggAAATGCCGATA
AAAGTCCAAGGGCATTGCAAAAGAAAGACTCACCTGAAGAAACGCCCACT
AGTCCACCGCCTCGGAGAGCGTCAGTTATCTCTTCAGTTATTTGCTCAAC
CATCAAATCGCCTGTTGAAAAGAATGCTGAAGGTCATCCACCAGAACTCC
AGTCAGTATTAAAGTCTCCGCCGTTGGAAAGAATGAAATCGCCTTTGGAA
AGACCGAACTCGCGTTCAGAGAGGATTCGATCTCCGCCCTCAGACAGATT
GACTTCATCACGTCAAACACGAAGATCATCCACTGCCGACAGACCTTTCT
CGCCATCTGATAGGCTACTTTCGCCAACTTCAGGAATACTTCACTCTCAA
TACGATCAGCTACCAGAGTCACGTCCAAAAGACCGTTATCCACCAAGAGA
TGCATCTCCATCTGCAAGAGATTTCCTACCTTATGACACTTATCGCTCAT
TTAAAAGCTCGTCTTCTGAAAGAATCGTTTCGCCGCGCGACCACCCAATC
GAGAGAATAGTTTCGCCGCGCGACCACTCAACTGAACGGCTCTTCTCGCC
ACGATCATCGAGAAATTCTGAACGAATTACGTCACCTCGCGGACCTTCAC
CGTTAGACTTGACCCCTTCACCACGATCGTCAAGGAAACCTTCACTCGAT
GTCCCTGCAAGAGATCCGTCACCTCGATCATCCGGTCGGCAATCGTCTTC
CATTTCTCCACGGGAACCTGTCATCCACTCACCAGACAACAGACCACCTC
ACTCATTGAGACTTCTCTCACCTTCACAATCAGAGAGACTGACCTCACCA
CCACCCTTGACCAGGGTCACTCCTCCATTGGAGAAACTTTCATCTCCAAG
ATCGAAACACTCATCACCGTTGATTGATCGAAGACCGTCTCCGTTGGAGA
GTGTTATTTCACAAAACACAAGTAGAATGAAATCACCAACCGACCGAACG
TCTTCCCCTTCTTCGAGAGCTAAATCGCCTATTCCGAGGGAAGCACCGCC
ACTCGACCGCATAAAATCCCCAAAGAATCATCCAACTCCACCCGCGAGAG
AGTTTGCTTCTCCTGGACATGGAATCACTTCGCCAGTCCTCCGCATGAAA
TCACCACGACCAATGGAAGGCCCCCCTCCTCTTGACCGAGTTGTCTCGCC
AAACTCCGAAAGACTCGGATCAACACCTTATGAACACGCCAATCTTTCTA
AGGATCGAATCAAATCACCTGTGGACAGGCTTTCGCTAAGTGAACCACGC
TCTTCACCGATAGCGGACCGTGTAATGTCACCACGAATCAAGTCTGCCAG
CGTCATTTCTTCAACAGGGAGCAAGACTTCGGAACGCCTTCTTTCGCCCA
CTAACAACAGACGAACGCCCAATATCACCTCACCGCCACCCTTCTCGCGC
GCTGAGAACGATATTCAATCAAAGCATTCTCCCAGTAACCGTGGAACACC
TGGAGATGAGAGACTGATGGGTGAACGATTCCAATCGCCGATCAGTAGTC
CGGTATATTCACCGGCCGTTGTGAGCAACCCTTTAACAATCGACTTGGAA
AAGAAGAAGATCTCTTCAGGGCGTGAAAGCGCCACCCTGCAAGTTATAAC
GCCTACACGAACACCCACTCCAATTAAGTCGCCTCTCACACAAACATTAC
AGGTTGTCACTTCGCCACGTCATGAGAATTCAATGTCGCCCTCTTTTCCC
GCCTCACCGCCCCAATTAGTCGATAAGGCGGTTTTGTCCTCGCAATTGAC
AAGGCCTACGGCGATTGTTGCCACGACAACAGCGAATAATGAATCGGTCG
ATCACGTGACTAAAACAGACGGAAAAGCATCATCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000268_pilon | genome | sc0000268_pilon:445407..448175 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2017-2784:2002 |
| Aaloc | 1-2001:1 |
|
