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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000389_pilon:218835..223575- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045783 ID=XLOC_045783|Name=XLOC_045783|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4741bp|location=Sequence derived from alignment at sc0000389_pilon:218835..223575- (Clytia hemisphaerica_ch_hm2_pilon)
AAATCTTCACAAGGAGAAATCTTCTGTATCCACAAGACAAGAGAAGACAT
GGTTGGTCAACAATATCTTCTAATTTTCTTATTGAACTTGAATTTGATCG
CTTTCAAACATTGTGCTATGTGTAAAAAGGTAATACGAAAATCATTAGAA
AAAAAATTCGGGATAAAAAAAGATTTCTTTCACTTTAAGTGTGTACTAAT
CTTTGTTTTATTGTTCAACGAATGCTTCAAATCTAACATAATATAAACCG
TTGAAAACATATTTTAGAGCACTTTTATCAAAAATTACTTTTTCATAAAA
AGTTAAATGCCTTAGAAGCTTTAACCTTATGAAGGCTTTTTTCAACATAT
ATAAAACATTTTCATTTTGTTATAGAAAACCATTGAAAACAACCATGGAG
TGAAACCGATGGTCTTTATCGATGAAAATGGTAAGAAACGCTTTACTGGG
GAGTTGAGCGAATATTATGTTCCCGGGGGGGGGGGGGGGCACTTATATGA
TCTGGCCAACGTCATGTGCCGCGCTTAAGGGTGGGGTTTTTCAGCATCCC
AAAATGCACTGTAAAGGGTGTGTTTTTGTGAGATTGCACTGCAAAGGTCG
AATTTTAAAACAAATTCAAAATAATTGATAAAAAGAAAGGTTTTTACTTC
TCGTTTGTTTGAAAAAGTTTTTTGTCTAATAATACACCTTTCCCGAATTG
TTATTTAGGCTTTTTGATTTTTTTGTTTTAGTGTTTGGATGTTTCTATTT
AGTTTCATAAAATTGTATGTCGCAAAACTAAACAAATAAAAAAAGAATTA
TGAAAAAAGCACTTCCGGTTCTTGAGTTATTTTGATTTGAAATTTCTTTA
TAAACAATAGAATTACATGGAAACGAGGCCGGGCTGTATGTTTTAACTTT
TATAAGTGATTTCACCGTGAACAAAAACAGTCATAAAAATTGATAGAAAA
AAGCCTTTGAGCTCAAATTTTCAGCATGCGCTTGTCTTTATAGGAGGAAT
ACAAATATATAGTTTTCAATATGGTTTGAAGACCTTCGAAAAATACCAAA
CAATTCGGGAAAGGTGTATTACAGCTGAAAAGAATATTTTTCTGAGTTTT
TCTTTGAAACAGAAAATTTCGCAAGCTTCTATTTTCACGCAGATTTACAG
CTGAAAAATATAGTGCACTATAAGGGTTGGGTAAATCAAGAGAAAATGCA
CTGAAAGGGTACCTTTTCAGTCACATTGAACTGAACTTTAAGGGTACGAT
TTTGAAAAGCAGATTTTGCGCGGCACATACCGTCGTTTCGAAATCGAGTG
ACCCCCCGGGATTACGTTAAACCCCTCTTTAGAGAATATTGTTTTTTTCC
TAAAATAAGTTTGTGGACGTGTTACGGAGATATTAACATATGAGTAATAC
ACGTTATTTAATAAAAAAACAATTCGGATTTTGCACAATTCGTCTGAGAT
GATCTGAGGTTCGTCTCGATAATAGATTGTTTTGCATCTGTTATACCTTT
ATACTGATGTATTTTATGGTCTTTCTGTCCTTAAAATGTGCATCTGAGAC
GTCTCAGGGCCCTCAGACTTTTCAAGATTATCTGAGGTTCGTCTCAATTT
TAAAGTCTTTCTGTCCTTAAAAATGTGCATCTGAGACGTCTCAGGGCCCT
CAGACTTTTCGAGATTATCTGAGGTTCGTCTCAATTTTAAAGTCTTTCTG
TCCTTAAAATGTGCATCTGAGACGTCTCAGGGCCCTCAGACTATTCGAGA
TTATCTGAGGTTCGTCTCAATTTTAAAGTCTTTCCTGTCCTTAAAATGTG
CATCTGAGACGTCTCAGGGGCCCTCAGACTTTTCGAGATTATCTGAGGTT
CGTCTCAATTTAAAGTCTTTCTGTCCTTAAAGTGTGAAAACGTCTCAGGC
CCTCAGGGACTATTCGAGATTATCTGAGGTCTCTCAATTTTAAAGTCTTT
CTGTCCTTAAAAATGTGCATCTGAGACGTCTCAGGGCCCTCAGACTTTTC
GAGATTATCTGAGGTTCGTCTCAATTTTAAAGTCTTTCTGTCCTTAAAAA
TGTGCATCTGAGACGTCTCAGGGCCCTCAGACTTTTCGAGATTATCTGAG
GTTCGTCTCAATTTTAAAGTCTTTCTGTCCTTAAAATGTGCATCTGAGAC
GTCTCAGGGCCCTCAGACTTTTCGAGATTATCTGAGGTTCGTCTCAATTT
TAAAGTCTTTCTGTCCTTAAAAATGTGCATCTGAGACGTCTCAGGGCCTC
AGACTTTTCGAGATTATCTGAGGTTCGTCTCAATTTTAAAGTCTTTCTGT
CCTTAAAATGTGCATCTGAGACGTCTCAGGGCCCTCAGACTTTTCGAGAT
TATCTGAGGTTCGTCTCAATTTTTAAAGTCTTTTCTGTCCTTAAAAATGT
GCATCTGAGACGTCTCAGGGCCCTCAGACTTTTCGAGATTATCTGAGGTT
CGTCTCAATTTTAAAGTCTTTCTGTCCTTAAAATGTGCATCTGAGACGTC
TCAGGACCCTCAGACTTTTCGAGATTATCTGAGGTTCGTCTCAATTTTTA
AAGTCTTTCTGTCCTTAAAATGTGCATCTGAGACGTCTCAGGACCCTCAG
ACTTTTCGAGATTATCTGAGGTTCGTCTCAATTTTATTGTCTTACGAGAT
TATCTGATGTACGTCTCAGTCTTATGGTCATTTCTTTCTTTTAAATGAAG
TTTTTCCAAAAATTGTGATTAGCCTATATTATATCAACTGTTTGTGAAGA
TACATGATCACTAAATTGTACAGTCAAATCATAACATTTAATTTCATTTT
TTAGCAATAAAACCTGTTAAATCTACAATGAAAAAAGATCTGTTTTCAAG
GAAAGAAATAGTCAAAATTTGAAATGAACCTCAGATAATCTCGAAAGATC
TCAGATGATCTGAGATGTTGTTTTTAAGGAAATACATAGTCAAAATTTGA
GACGAGCCTCAGATGATCTCGAAAGATCTCAGATGATCTGAGACGTCTGA
GACGCTGTTTTCAAGGAAAAAAAAGTCAAAATTTGAGACGAACCTCAGAT
GATCTCGAAAGATCTCAGATGATCTGAGACGTCTGAGACGCTATTTTTAA
GGAAAAAATAGTCAAGATTTGAGATGAAATTTAGATGATCTCAGACGTCT
GAGACGAATTAATCAAAATCCGTGCCTAAGTGCCCCTTTCTCACCGTACG
TATCATACCCAACACCTATATCTGTCTAAGCCCCCCCCTTGGAATTTTAT
TGTCTTACGAGATTATCTGATGTACGTCTCAGTCTTATGGTCATTTCTTT
CTTTTAAATGAAGTTTTTCCAAAAATTGTGATTAGCCTATATTATATCAA
CTGTTTGTGAAGATACATGATCACTAAATTGTACAGTCAAATCATAACAT
TTAATTTCATTTTTTAGCAATAAAACCTGTTAAATCTACAATGAAAAAAG
ATCTGTTTTCAAGGAAAGAAATAGTCAAAATTTGAAATGAACCTCAGATA
ATCTCGAAAGATCTCAGATGATCTGAGATGTTGTTTTTAAGGAAATACAT
AGTCAAAATTTGAGACGAGCCTCAGATGATCTCGAAAGATCTCAGATGAT
CTGAGACGTCTGAGACGCTGTTTTCAAGGAAAAAAATAGTCAAAATTTGA
GACGAACCTCAGATGATCTCGAAAGATCTCAGATGATCTGAGACGTCTGA
GACGCTATTTTTAAGGAAAAAATAGTCAAGATTTGAGATGAAATTTAGAT
GATCTCAGACGTCTGAGACGAATTAATCAAAATCCGTGCCTAAGTGCCCC
TTTCTCACCGTACGTATCATACCCAACACCTATATCTGTCTAAGCCCCCC
CCCCCTTGGAGGTTAAAAAGAGATGTTTTTAATAACCTACGCATCACTGA
TTTGGCTTTTCCAGAAAAGAAATTTTACCCCCACTGTCGAGGATAATGAT
TTTTCAAAGTATGGAACCCCCTGGATATCCTACTTTATTAGTAAAGACCT
CTTGGATATCCACTCTTAAGAATATGCCCAACCCCCTGGATATTCTCTCT
TATAAAGATGCTTACCCCTGGATATCGTATATTTTACTTGAAAGACACTT
TACCCTTGAATATCCGCTTCCTTGTAGATATTTAACCCCCTTGATATCCA
CTTTTGAACAAAAAATGGTTAACCCCGATATCCTCAACAGGAGGGGCACG
GACTATTTCTGGAAAAGCCCATCACGAACTTTATTACATCTTTTTATTTT
CAGAAGTGAGGGTGACACAGAATAATCTATTAAAGGTGATAGATCGTTTC
TCAACAGAATGGAGTATAATGTTTTCAATGCGATTATCCACATCAATACC
ATCTGGTGACGACGGATTACCTACATGTAATATAATTAATTTATCAGAAG
ATAATATTCAGAGTTCTCATTATGGCGCCCGTACTCCATATGTGGGGTTA
AGGAAAGATACTAGAAAAATACATACCACGTCTGCTATTAACGGGAACTG
GAATGAAATTAAGGAGCTACCACCTGTTATCATTGACCAAACTTATCACC
TCGAAATTCACCAAAGATATGTCAGTAATGGTCATTACAGATATTTCATC
ATGATTGATGGAGTTGAAGTTTACAGTGTTCTGAACACTGATGCTCGGCA
ATTTTATAATGTTCATGTGTATGCAGGGAACCCGTGGAATGAGCCTTGCC
CTGTGTACATCAGTAATTTTAAATTAACAAACTTTTTGTAA Coding sequence (CDS) from alignment at sc0000389_pilon:218835..223575- >XLOC_045783 ID=XLOC_045783|Name=XLOC_045783|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1344bp|location=Sequence derived from alignment at sc0000389_pilon:218835..223575- (Clytia hemisphaerica_ch_hm2_pilon)
AAATCTTCACAAGGAGAAATCTTCTGTATCCACAAGACAAGAGAAGACAT
GGTTGGTCAACAATATCTTCTAATTTTCTTATTGAACTTGAATTTGATCG
CTTTCAAACATTGTGCTATGTGTAAAAAGAAATCTTCACAAGGAGAAATC
TTCTGTATCCACAAGACAAGAGAAGACATGGTTGGTCAACAATATCTTCT
AATTTTCTTATTGAACTTGAATTTGATCGCTTTCAAACATTGTGCTATGT
GTAAAAAGAAAACCATTGAAAACAACCATGGAGTGAAACCGATGGTCTTT
ATCGATGAAAATGAAAACCATTGAAAACAACCATGGAGTGAAACCGATGG
TCTTTATCGATGAAAATGAAGTGAGGGTGACACAGAATAATCTATTAAAG
GTGATAGATCGTTTCTCAACAGAATGGAGTATAATGTTTTCAATGCGATT
ATCCACATCAATACCATCTGGTGACGACGGATTACCTACATGTAATATAA
TTAATTTATCAGAAGATAATATTCAGAGTTCTCATTATGGCGCCCGTACT
CCATATGTGGGGTTAAGGAAAGATACTAGAAAAATACATACCACGTCTGC
TATTAACGGGAACTGGAATGAAATTAAGGAGCTACCACCTGTTATCATTG
ACCAAACTTATCACCTCGAAATTCACCAAAGATATGTCAGTAATGGTCAT
TACAGATATTTCATCATGATTGATGGAGTTGAAGTTTACAGTGTTCTGAA
CACTGATGCTCGGCAATTTTATAATGTTCATGTGTATGCAGGGAACCCGT
GGAATGAGCCTTGCCCTGTGTACATCAGTAATTTTAAATTAACAAACTTT
TTGTAAAAGTGAGGGTGACACAGAATAATCTATTAAAGGTGATAGATCGT
TTCTCAACAGAATGGAGTATAATGTTTTCAATGCGATTATCCACATCAAT
ACCATCTGGTGACGACGGATTACCTACATGTAATATAATTAATTTATCAG
AAGATAATATTCAGAGTTCTCATTATGGCGCCCGTACTCCATATGTGGGG
TTAAGGAAAGATACTAGAAAAATACATACCACGTCTGCTATTAACGGGAA
CTGGAATGAAATTAAGGAGCTACCACCTGTTATCATTGACCAAACTTATC
ACCTCGAAATTCACCAAAGATATGTCAGTAATGGTCATTACAGATATTTC
ATCATGATTGATGGAGTTGAAGTTTACAGTGTTCTGAACACTGATGCTCG
GCAATTTTATAATGTTCATGTGTATGCAGGGAACCCGTGGAATGAGCCTT
GCCCTGTGTACATCAGTAATTTTAAATTAACAAACTTTTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000389_pilon | genome | sc0000389_pilon:218835..223575 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 181-666:487 |
| Aaloc | 124-177:4367 |
| Aaloc | 28-123:4709 |
| Aaloc | 1-27:4742 |
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