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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000035_pilon:1203050..1207104+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045734 ID=XLOC_045734|Name=XLOC_045734|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4055bp|location=Sequence derived from alignment at sc0000035_pilon:1203050..1207104+ (Clytia hemisphaerica_ch_hm2_pilon)
tcaaaattaaaatctcaaaaaatgttgcaaaatttTGTACCATTACGTAA
TCAACCAAGTACAATTCAAACGTCATTAAGAGCCAATCAAAACATATCTG
CTGATGCTGTCAGAAGTCGTCACGGAATTGAAGTCGAAGGTAAAAGCTAC
TTTGTAGTTTGCTAATGTTGGTACAgcggactctctctaattcgaatttc
tatCATTCGAATCGCAACTTATTCTCAGCTCCCCTTAAAGAGAAATCCTC
CTTAAAAACACactttaattcgaatctttctggaATGTCAGACAAATTAG
AATGGTGTAGTCTGTTGTTGACCTCCCGGACGAagaaatctcataaaaaa
gacTGTTTTCTCCAAATCTTTGGTCGAGGCAAACTTTTGGAATGTATCAA
TACATACGTTGGATAAACCCTTCATTTCACTTTTAcagtaaaagattttt
tcgtcTTTTGTTAAGTAATGCCATTAtgaaagcaaacgttcgaatctgta
aaggcgaaatcgaacgtttgcttccataatggtggacgTTACGTAActta
gaaaaatatcaaaaattctaTAGTTTTGGAGCTAAATGATATAAGCTATT
CCACctcatttttctttgtttttaggtGACAATGTACCTGACCCGATATC
AAGTTTCGATGAAATGGAGATTCCACAAGcgttgaaaatctttttaaaac
gtGTCAAGAAAATCTCGAAACCTACACCAATTCAAATGCAATCGATAAGT
ATGTTGTTCAGTTGTTTCTTATGGGATagtcagatggtttgagatatttt
gactCTCCGAATCTTTTTGTCCAAAtgttttccaaagtcgagatatttta
AGAACCATCTTAGAACCcgttttgaaagatttcaaattgtcatatttcga
ctttggaaaatttggaaaagagttagacaaaatatttggaaGTTTCTCTC
AGGATTTTGGGACAATTGTACAAGCCGAAGaactcaaaccatctgattat
ccctttctATAGTTAACCTTTCGATAGTTGGGTTGGAAGGTAAGACTGTT
TAGACCAAATATTAGACCTAACATGACTCGAGAAACTTTTTAATCCAGAA
GGGAATGGGCTTTTCCCGAAAAGAATTttaccccactgttgaggatatta
tATATCCTACTTCATTaataaagaccccctggatatccactcttaaaaat
atgctcaaccccctggatatcccctcttataaagatgcttacccctggat
atcgtattttttacgtgaaaagacactttaccccctggatatccgctccc
ttgtagatatttaaccccctagATATCCactttcgaacaaaaatcgttaa
ccccctggatatccgatatcctcaacagggggacacggactatttctgga
aaagcccaataaaaCTTTCAGTTTGGTGACCTgacgtttccccgacagac
gtttccccgacagacgtttccccgacagacgtttccccgacagacatttc
cccgacagacaAAATGAGTGGAGCCAGTGGTTTCTTTCATTTTGGTAAAG
GGTGTGATCTCTTGGTTTTTTCACCTCATTTAGTGTAACCCTACATCCAG
TGGCTccgcatttttttgttttctcccTTTCTAGTCCTAATCAAAGCcca
ataaacaaaaactttcatttGTAAAATCTTTCCTCGTTCCATATAGGTTG
TTTACAACATCAACGTGACATCATATGTCTTAGTGCTACAGGCACCGGGA
AAACATACGGCTACTTGCTGCCATTATGTTCGTTTCTATGGAAACGCCAA
AACAATATTCATCACCAAGCACAACGAAATCAACAAGCAAGTCAGCCATT
ATGTCTCATCATTGTACCAACAAGAGAGTTGGTGAACCAAGTATTAGCCA
TCACACGAGAATTATTATCAGCTTCTAATATTTTCGTGCAATCATCAACC
AACTATGGACATTCACAAAGAAACGGGCATTCGACTCCAGGTCCCTCGCA
CTTCGTCGATAATTCGTCACCTGTGAATCACCCTCCATTTAATAATACGG
GTGGAAGGGCGTTACCgaatcaatggaattttcacCCGCCACGGTCACAA
TTTATTCAACAACCTATAAACACTCCGAATTATAATCAACACCCGCCCTA
CACACCGCCTCGACGCCCACACCCACCCTACACACTGCCTCAACGCCCAT
CTTATCAGCAGCAAATGTCTAATATGGCCAATAATGTCGGATATGCATAC
GAATCTCAAATCCCGAATGCCAACCAGCAATACGCTAACATCGAAAAGAT
TGTGAAGCAAAAAATAATAGGACTCTGTGGTGGAACACCAGTACATGATG
ACGTTACACGACTCAATATTGATCAACATGTAGTTGTTATAGCAACTCCA
GGTCGTCTCTTAGACCTATGTTCAAGGAACGTGTTGAATCTTGATGGAGT
GAGATATTTTGTGATTGATGAATGCGATCGGATACTTGATATGGGAATGG
AGGAACAATTGAGACAAATCGTTGCAAAGGTTCGTCTACTCAATATTACA
CTGCAGTCTCAAGAACTCGAACCCTTATTTAATCTGAATCGCAGActtct
atagatatacttcctataagaaattgttttcgctagaggatgagcagaag
cctaaccCTTAttatcttaggttccaaataaacggacCCAGCTTGTTAAT
TTTCGAACCTCCGggccttattaggacccccttccccgtttattaaattt
taagaatattttcagctgtcaaagaaaaGGCCCCTATTTAttctctaaat
agcctgattttagcctatatttaccttatttttgggttttcagaagtaca
atttccaaccccccggcaattaggcgcctcccgtttattaaaatctcgaa
aatcttcgaaccccccccccggtttattcgacccccccctgtttatttag
AACCTAAGAATACTCTTATGTCTCATTAATTCTTTCTTATCCCTTCAGTT
AGCTATGCCaaaccttacttcataactcGAGATTTCAATAAATCGAGCAA
ATTAGTGTTTCCAGTGCGTGTTCGAGTTGTCTCAAGTTTGTGCTTAATAT
ATTTCCGATATCTTATACCGCATTTACGAGTAGCAATCCAAAATTTCGCT
CAACAATCAAGTAAAAATTTATCCGAATAATTCGAGAGACGAACCAAGCT
GTAGCTGGCCCCACAAAAAAGACTCTTAAAAAAGTCATATAACAGCCATA
TGATATTTTTTAAGGTAAAAACTAAATTCCACCAGACTAAAATAACTCAT
CACTAGAAAAAGAAGTTCCTTCTGTGCCTGAAATAGGGATGTGTTGCGCG
CTTTTTAgcctttgtttttttgttgattcTCAGGTGACAATCAACTCCAA
CCATGATGATATCCGTACAAGCTTGTGGTCAGCGACTCTTCCCGAATCAT
TAGAAAGAATCGCACGATCCGCGGTCATACATCCAATCTACGTCTGTTGC
GGTATCAAAAATTCTGTCCCACGTAACATCCAGCAAGACGTACGTTTCCT
ACATACGTACCAGAAACGTGAAGTGTTATTAGACGTTTTACGTCAAATTC
CGTACCCGCCCGTTCTGGTTTTCACGTCGTCAAAAGATaaagttgatgac
gtcactgaATTTTTACATGGTGAACAGTTTCACGCAGCTGCGTTGCATTC
TGGGTACCCACAAGACTATCGTAATGACGTTATAACGTCTTTCCGTAGCG
ATGAGATTGATATTTTAGTGGCGACTGACTTAGCAAGCCGTGGTCTTGAT
GTCCCAACTATAACACACATTATTAATTATGATACACCTGATACTATAGA
GGATTATATACATCGTGTCGGGCGGACAGGACGTTTTGGTCGCGCGGGTA
ACGTGACTACTTTTTTGACTCTTGATTGTAAGATTGCGAACGAGTTGAAA
GAACTTTTGGAATGTTCGAATTGTGATGTTCCTCTTCAGTTGAGGGATGT
GAAAATGTTTGGACAAAAAGTACTTCATACGGAAATGGGTGATCGTGTCG
CTTGA Coding sequence (CDS) from alignment at sc0000035_pilon:1203050..1207104+ >XLOC_045734 ID=XLOC_045734|Name=XLOC_045734|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3474bp|location=Sequence derived from alignment at sc0000035_pilon:1203050..1207104+ (Clytia hemisphaerica_ch_hm2_pilon)
tcaaaattaaaatctcaaaaaatgttgcaaaatttTGTACCATTACGTAA
TCAACCAAGTACAATTCAAACGTCATTAAGAGCCAATCAAAACATATCTG
CTGATGCTGTCAGAAGTCGTCACGGAATTGAAGTCGAAGtcaaaattaaa
atctcaaaaaatgttgcaaaatttTGTACCATTACGTAATCAACCAAGTA
CAATTCAAACGTCATTAAGAGCCAATCAAAACATATCTGCTGATGCTGTC
AGAAGTCGTCACGGAATTGAAGTCGAAGgtGACAATGTACCTGACCCGAT
ATCAAGTTTCGATGAAATGGAGATTCCACAAGcgttgaaaatctttttaa
aacgtGTCAAGAAAATCTCGAAACCTACACCAATTCAAATGCAATCGATA
AgtGACAATGTACCTGACCCGATATCAAGTTTCGATGAAATGGAGATTCC
ACAAGcgttgaaaatctttttaaaacgtGTCAAGAAAATCTCGAAACCTA
CACCAATTCAAATGCAATCGATAAGTTGTTTACAACATCAACGTGACATC
ATATGTCTTAGTGCTACAGGCACCGGGAAAACATACGGCTACTTGCTGCC
ATTATGTTCGTTTCTATGGAAACGCCAAAACAATATTCATCACCAAGCAC
AACGAAATCAACAAGCAAGTCAGCCATTATGTCTCATCATTGTACCAACA
AGAGAGTTGGTGAACCAAGTATTAGCCATCACACGAGAATTATTATCAGC
TTCTAATATTTTCGTGCAATCATCAACCAACTATGGACATTCACAAAGAA
ACGGGCATTCGACTCCAGGTCCCTCGCACTTCGTCGATAATTCGTCACCT
GTGAATCACCCTCCATTTAATAATACGGGTGGAAGGGCGTTACCgaatca
atggaattttcacCCGCCACGGTCACAATTTATTCAACAACCTATAAACA
CTCCGAATTATAATCAACACCCGCCCTACACACCGGTTGTTTACAACATC
AACGTGACATCATATGTCTTAGTGCTACAGGCACCGGGAAAACATACGGC
TACTTGCTGCCATTATGTTCGTTTCTATGGAAACGCCAAAACAATATTCA
TCACCAAGCACAACGAAATCAACAAGCAAGTCAGCCATTATGTCTCATCA
TTGTACCAACAAGAGAGTTGGTGAACCAAGTATTAGCCATCACACGAGAA
TTATTATCAGCTTCTAATATTTTCGTGCAATCATCAACCAACTATGGACA
TTCACAAAGAAACGGGCATTCGACTCCAGGTCCCTCGCACTTCGTCGATA
ATTCGTCACCTGTGAATCACCCTCCATTTAATAATACGGGTGGAAGGGCG
TTACCgaatcaatggaattttcacCCGCCACGGTCACAATTTATTCAACA
ACCTATAAACACTCCGAATTATAATCAACACCCGCCCTACACACCGCCTC
AACGCCCATCTTATCAGCAGCAAATGTCTAATATGGCCAATAATGTCGGA
TATGCATACGAATCTCAAATCCCGAATGCCAACCAGCAATACGCTAACAT
CGAAAAGATTGTGAAGCAAAAAATAATAGGACTCTGTGGTGGAACACCAG
TACATGATGACGTTACACGACTCAATATTGATCAACATGTAGTTGTTATA
GCAACTCCAGGTCGTCTCTTAGACCTATGTTCAAGGAACGTGTTGAATCT
TGATGGAGTGAGATATTTTGTGATTGATGAATGCGATCGGATACTTGATA
TGGGAATGGAGGAACAATTGAGACAAATCGTTGCAAAGCCTCAACGCCCA
TCTTATCAGCAGCAAATGTCTAATATGGCCAATAATGTCGGATATGCATA
CGAATCTCAAATCCCGAATGCCAACCAGCAATACGCTAACATCGAAAAGA
TTGTGAAGCAAAAAATAATAGGACTCTGTGGTGGAACACCAGTACATGAT
GACGTTACACGACTCAATATTGATCAACATGTAGTTGTTATAGCAACTCC
AGGTCGTCTCTTAGACCTATGTTCAAGGAACGTGTTGAATCTTGATGGAG
TGAGATATTTTGTGATTGATGAATGCGATCGGATACTTGATATGGGAATG
GAGGAACAATTGAGACAAATCGTTGCAAAGGTGACAATCAACTCCAACCA
TGATGATATCCGTACAAGCTTGTGGTCAGCGACTCTTCCCGAATCATTAG
AAAGAATCGCACGATCCGCGGTCATACATCCAATCTACGTCTGTTGCGGT
ATCAAAAATTCTGTCCCACGTAACATCCAGCAAGACGTACGTTTCCTACA
TACGTACCAGAAACGTGAAGTGTTATTAGACGTTTTACGTCAAATTCCGT
ACCCGCCCGTTCTGGTTTTCACGTCGTCAAAAGATaaagttgatgacgtc
actgaATTTTTACATGGTGAACAGTTTCACGCAGCTGCGTTGCATTCTGG
GTACCCACAAGACTATCGTAATGACGTTATAACGTCTTTCCGTAGCGATG
AGATTGATATTTTAGTGGCGACTGACTTAGCAAGCCGTGGTCTTGATGTC
CCAACTATAACACACATTATTAATTATGATACACCTGATACTATAGAGGA
TTATATACATCGTGTCGGGCGGACAGGACGTTTTGGTCGCGCGGGTAACG
TGACTACTTTTTTGACTCTTGATTGTAAGATTGCGAACGAGTTGAAAGAA
CTTTTGGAATGTTCGAATTGTGATGTTCCTCTTCAGTTGAGGGATGTGAA
AATGTTTGGACAAAAAGTACTTCATACGGAAATGGGTGATCGTGTCGCTT
GAGTGACAATCAACTCCAACCATGATGATATCCGTACAAGCTTGTGGTCA
GCGACTCTTCCCGAATCATTAGAAAGAATCGCACGATCCGCGGTCATACA
TCCAATCTACGTCTGTTGCGGTATCAAAAATTCTGTCCCACGTAACATCC
AGCAAGACGTACGTTTCCTACATACGTACCAGAAACGTGAAGTGTTATTA
GACGTTTTACGTCAAATTCCGTACCCGCCCGTTCTGGTTTTCACGTCGTC
AAAAGATaaagttgatgacgtcactgaATTTTTACATGGTGAACAGTTTC
ACGCAGCTGCGTTGCATTCTGGGTACCCACAAGACTATCGTAATGACGTT
ATAACGTCTTTCCGTAGCGATGAGATTGATATTTTAGTGGCGACTGACTT
AGCAAGCCGTGGTCTTGATGTCCCAACTATAACACACATTATTAATTATG
ATACACCTGATACTATAGAGGATTATATACATCGTGTCGGGCGGACAGGA
CGTTTTGGTCGCGCGGGTAACGTGACTACTTTTTTGACTCTTGATTGTAA
GATTGCGAACGAGTTGAAAGAACTTTTGGAATGTTCGAATTGTGATGTTC
CTCTTCAGTTGAGGGATGTGAAAATGTTTGGACAAAAAGTACTTCATACG
GAAATGGGTGATCGTGTCGCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000035_pilon | genome | sc0000035_pilon:1203050..1207104 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1078-1749:3384 |
| Aaloc | 736-1077:2188 |
| Aaloc | 550-735:1972 |
| Aaloc | 280-549:1699 |
| Aaloc | 157-276:628 |
| Aaloc | 109-153:94 |
| Aaloc | 13-105:1 |
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