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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000380_pilon:181380..183606+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045718 ID=XLOC_045718|Name=XLOC_045718|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2227bp|location=Sequence derived from alignment at sc0000380_pilon:181380..183606+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGGTCTCTCCACTCACAAAACCAGCTCAACGGGTAAATATGAGAA
CACTGAACAACACCCGCAAGGGCTGAAGACCAACAAACAAAAACTGATGG
ATGCTTCCCGCAGTGTCATCAACATGGATTCTGGCATCAGTCCAAACCAA
CACGAAATCATATTGCGACACCTGGAGAAACTCGAGAAGAGCTCCCAAGG
GAACATTCGAAATCCACACATCACATCATGTGGATCACTCAGCAGCCGAC
AGACATCAATCGAGCGCTTAGCTCAAGAGTTAACTAAATCCACCTATGAC
AATACTTCAACTGCCCAACTTCTACAGTCGTTGTCAGTTCTTCAGGGTGA
GAGATCAGACATTCCTGCTATGAGGAAAGACATCGATTCTCTAAAACGCT
CAGTCGATAGCACGCACACCATCTTGAAACATTTGTGCGTTGTGGTGATG
GAGGGGAACAAATCATCCGGTGCTGAACCACCCTCGGCGCCCAATGGCGT
TCCCTTTGAAGAACACGAAAGGGTGGTGTCGGAAAAAGACGTCCAAATCA
AGCGAATTAAACAACATGCTGAGACTATGGTAAGtttttttGATTCCTTA
AATTTTCAACAAGATCACATCGAGAATAACAATAATTattcttttttgag
attctacTATCACTTTACTAGTGCTTTAGAAGCTGGCAacttataattat
atttgaaGTGTCCCCTCACTTGTAGCACAATGAGCCTTCGTTACCCAAAG
AAGATTTTGAAGCTTAGAAGTGGTTTTCAGTTTCTGTGTTATTTCCATAC
TCAGCTCACTACTTAAATTAAAATACATTGATAGAGCAAGGAAGTCTTTT
GTTAGGCTTGCCATGGTaaagtggtagtcgaccttggcttctgtgcagga
ggccagggttcgattcccactcacggcagttcacttggcaagtgaacgtt
cctttgcccgggtcaacccatggaAATTGAATGTTCTTAGGCGACATGTT
GTGTTATTGATAGGAAATTGGGTAAACAGAAACTCAAGTAACCTGTCTGG
ATCGATCACATAAAACCTGTTGATAATGTTGCGAATTtgctaaaattcgc
gaaattaaatggtcgtgaaaaaaatgaatattatgttgatttgcaaaatt
aaattcccgcgaaataaaaaaaatttcgcgaatggccTGACTCTTGCAAT
CTAGTTTTACTAGATATTTAAAAGTACTCTTGTCTCGCGAATAGACGgag
gggggtccgaataagcagggggtaggaaaattttcttaattctaATAAGT
gggggggAGACAAAAAttcgtctattcgggagacaagagtagctttaact
ttttttaaattgatagtttttttctcaaaatcaggAATACTGTTTAATAA
CGTCACTCCCTTAGTAGGAAAATTGCATTGCACTTTTCTAGTCAATCAGG
CATTATCAACATTAAATCAAAGTCAGTTTATTTGAAATATaattcgaact
actttttcaaacctaatgtatgatagctcaaaattcaagttagagcatca
tCTAAACAATCCTGAAAAAAtcctcgacaaacctgtatactttttttttt
ggtgcacctgGTATATTTTTTAACTCTTAGTGTTTCGAGCACTCTAGTGG
AAACACGCTCGTTTACCGCGGCCTGATATGTCCTGGGAAGGAACACGTGT
CCGCGGAAAGATGAAACACAAATGTAGGAGTGCTCTTGTGAAAAATTTAA
GATACCCTTGCATTGAAGCGATAAAGTAACTTCAATATAGTTAAGCCATA
CGAATGCTGAAAATAGTTTGCACTCTACCGCAAAGACTCGGGAAATGCCT
CTAGAGTTTTGGCTGGAATTTGCTTGGTTTGATTTAGTTAATAGACTAAA
AATGCCGTGCACCGAGAGCAAAtcttccttgtaaattcatttcCAGTCCT
TTAAAAAGCCGATCGCTCCGCTAAGGTCTGATATGCATTATGTTACATTC
TTTTATAGTTCGACGAGTATCGATGCCACATCGAGAAACTCAAGGATGAA
AAGGCATTATTGGCTGGCGAAGTGATAAGCCTTAAAACAACAATGTCTAA
TGTCTTTACGGCTGAGATAGAAGCGAGGAATCTAACCATCGCCTCACAAT
CACAACACATTGATAAGTTGAGCACGGAATGCTCgaaattgattttctta
ttGGAGGAAGCCAAACACCAATTAAGA Coding sequence (CDS) from alignment at sc0000380_pilon:181380..183606+ >XLOC_045718 ID=XLOC_045718|Name=XLOC_045718|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1596bp|location=Sequence derived from alignment at sc0000380_pilon:181380..183606+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGGTCTCTCCACTCACAAAACCAGCTCAACGGGTAAATATGAGAA
CACTGAACAACACCCGCAAGGGCTGAAGACCAACAAACAAAAACTGATGG
ATGCTTCCCGCAGTGTCATCAACATGGATTCTGGCATCAGTCCAAACCAA
CACGAAATCATATTGCGACACCTGGAGAAACTCGAGAAGAGCTCCCAAGG
GAACATTCGAAATCCACACATCACATCATGTGGATCACTCAGCAGCCGAC
AGACATCAATCGAGCGCTTAGCTCAAGAGTTAACTAAATCCACCTATGAC
AATACTTCAACTGCCCAACTTCTACAGTCGTTGTCAGTTCTTCAGGGTGA
GAGATCAGACATTCCTGCTATGAGGAAAGACATCGATTCTCTAAAACGCT
CAGTCGATAGCACGCACACCATCTTGAAACATTTGTGCGTTGTGGTGATG
GAGGGGAACAAATCATCCGGTGCTGAACCACCCTCGGCGCCCAATGGCGT
TCCCTTTGAAGAACACGAAAGGGTGGTGTCGGAAAAAGACGTCCAAATCA
AGCGAATTAAACAACATGCTGAGACTATGATGTCTGGTCTCTCCACTCAC
AAAACCAGCTCAACGGGTAAATATGAGAACACTGAACAACACCCGCAAGG
GCTGAAGACCAACAAACAAAAACTGATGGATGCTTCCCGCAGTGTCATCA
ACATGGATTCTGGCATCAGTCCAAACCAACACGAAATCATATTGCGACAC
CTGGAGAAACTCGAGAAGAGCTCCCAAGGGAACATTCGAAATCCACACAT
CACATCATGTGGATCACTCAGCAGCCGACAGACATCAATCGAGCGCTTAG
CTCAAGAGTTAACTAAATCCACCTATGACAATACTTCAACTGCCCAACTT
CTACAGTCGTTGTCAGTTCTTCAGGGTGAGAGATCAGACATTCCTGCTAT
GAGGAAAGACATCGATTCTCTAAAACGCTCAGTCGATAGCACGCACACCA
TCTTGAAACATTTGTGCGTTGTGGTGATGGAGGGGAACAAATCATCCGGT
GCTGAACCACCCTCGGCGCCCAATGGCGTTCCCTTTGAAGAACACGAAAG
GGTGGTGTCGGAAAAAGACGTCCAAATCAAGCGAATTAAACAACATGCTG
AGACTATGTTCGACGAGTATCGATGCCACATCGAGAAACTCAAGGATGAA
AAGGCATTATTGGCTGGCGAAGTGATAAGCCTTAAAACAACAATGTCTAA
TGTCTTTACGGCTGAGATAGAAGCGAGGAATCTAACCATCGCCTCACAAT
CACAACACATTGATAAGTTGAGCACGGAATGCTCgaaattgattttctta
ttGGAGGAAGCCAAACACCAATTAAGATTCGACGAGTATCGATGCCACAT
CGAGAAACTCAAGGATGAAAAGGCATTATTGGCTGGCGAAGTGATAAGCC
TTAAAACAACAATGTCTAATGTCTTTACGGCTGAGATAGAAGCGAGGAAT
CTAACCATCGCCTCACAATCACAACACATTGATAAGTTGAGCACGGAATG
CTCgaaattgattttcttattGGAGGAAGCCAAACACCAATTAAGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000380_pilon | genome | sc0000380_pilon:181380..183606 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 577-795:2009 |
| Aaloc | 49-576:52 |
| Aaloc | 1-48:1 |
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