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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000022_pilon:2168098..2174271- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045689 ID=XLOC_045689|Name=XLOC_045689|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6174bp|location=Sequence derived from alignment at sc0000022_pilon:2168098..2174271- (Clytia hemisphaerica_ch_hm2_pilon)
AGTGAAGCAGTCATGCGGCGGAAAAAAGAAAGAATATGTCGACCAAAGCA
GCCAAAAGTAAGTGAAATCTAGAGCTTATAAGTAAAATCGTATTTATTGT
TCAATGCCTTAAAAGTGTGCTCTAGGACAACACCTTGTCACTGCAATTCG
CGGACCTTAATTTTACTCTGAAAGGTGGTTTGTATGTCATGACAATTTTC
ATTCTATAACATGAACACCAATGGCTTATGCTAACACAGCAACATCAATC
GAACCAACAGAAGCATCAATCACACCAACCGAAGCACACTGTATCAATTG
TTTCATAGTACCACATCCTAATCCACATCCACAACTTCAAGCTACATGGC
TTTCTGAGCAAGATACATATGCCATAGAGCTTCTGAAAATTAGATTTCCC
AATATCAATGTCATCTTCATTCAGGCCATGTTCAGACAAAATAAAAGGGA
ATTAACCAGAACAATGAGATTTCTTGAAAGGATGGGATTGTGAAATATAT
TTGGTAAGACAGTCTGGGAAATCCTCTCAATTGCACGTTTATGTTCTGAG
GGCGTAAGCGCGCAATTAATTGCATGGTTATAATTTACGCCTGCTCCTGC
CCCTGTTGAAATTGCTTAGGGATTTCAAGGGGTTCAGAATTCTCTAATTC
GGGCGAAGGCATGATGGTTTAACGGGCAATCCATTTTTACGGAATCTTCT
TCTATGATAAAATTTGAGTAATACTGCCCTAGGCTTTTGAAATTCAACAG
AGCTTTTCGGAAGGAATTGCGTGTCAAAAATATAAGAAATTTTAAAGCGT
GCAATTGCACGCTTACCGCAAAAGCCGTCACCCGTCAACCTTGCTTAACG
CTTACTGCCCGTTTCAGAACAATTTCGATAAGCGTGTATAAAAATTCTGC
CATTTTGATAACCGTGCAATTGCGTGCTTACGGCCTCGGAACATAAGCGT
GCAATTGAGAGGATTTCCCAGACTGTAAGAGGCAATGAATTTCTCATCTC
ATAGTGTGATCCTCCATGTAGTTAAATTGAAACATGTCATTTTCATGTTA
TTTTAAATTTTTTGGGTTATCGAATAGCTGAGCAAGCTAGACCTTCTTAG
GTAAAGTAAAGGTAGGTATAATCCAGACGTTGATCAATCAAATTAATCGA
ACAGATTTCTAATTGAACTAATCAAACCTAATCGAGCGAGAGTTCGACTA
TCAAACTTAATCGAACCTAATCGAACACTCACAATTATTTATAAAACTTG
AGTTCGATTAGTTTGATTAGGCAAAAAATAGTTTGATTAGTTAGTTATTC
AAATCTTCACCTCCTTTTGCAAAACTTATCACAACTTCTTTGACCTTTGT
AAAGCTGCTAGTCTCAGATATTTTGCTCGCCCGCATATTTTGCTTGCCCA
GAAATTTAGTTGATTTTTTCCTTTAAAATCAGACTTTGAATGGTACAGAC
TAGTCAAACAAATTAGGTTGTCAAACTAATCGAATCATAATCAGGCGTAG
ATCACAAATAAGTTGTGTTCGCGTTGTCCGACCTACTCACTTTCTATCTT
AAAAATCCGACACTTTTCAGTCGGAAAGTCAGAAATCTATCGGATTATTT
ATTACTATTTTTCAAAGCATTTTGTACATTCATCGTAAGTTGCCGATTTG
ATCATCCAGTGTGAGTTCAAAGAAGCTTTCCGTCCGTAATTTTTCAAAGA
TTGTTTGCGTTAAAAAGCGCTATGCAACTGTTTTTTGCAACCGTGATATG
TAACAAAGATCATAATGCAGCTAGTGCACTTGATAATTCTTGCCGGGCGA
ACAAACCTATATTCAGGGTGCATTTTTTAAAAAATCGGTTCGATTAGTTC
GATTGATCGGATCTGGTATAATATAATGTGATCAGCTTAGAAAATGTCTA
AAAAAATAGAAAACCAGATGGTGTGAATTGAACAACTTTGAACGAAAATT
GCAATCGAACCAATCAAACATAGTTGAACGCAATCCAATAAATTTTAGGT
GGGGGATCTATATTTAGTGGTGGGACCATGCATGGGTCCATTTGTTTCAG
CACCATTTATGCCACTTATGCCGCATTTTTCCCATTTGTTTCATCGAAAT
GTGTTCAAAAGTGTTGAAATTACTTATATTTTTACCACCTCGATTTACAT
TGATCATTTTGTGCTTTTTTGTCAAAGTGGAAGTTTGCCAAGCTTTTCCA
AGCAAAAGAAATTCGCATTTGTTTCTACATTCTGGGTCAACAGTGGAAAA
TGTTATAATTGTAAGTGGTGGCAATTTCGAATGCATAATTACGATGCGTT
TCACTTTTGTTTTCTTGTTTGTTTACATTTCCGACATAATTTATGCGGCT
ATTATTGACGTAACGAAGAGTTTGCAAGATGGTAGACTTTTGCATTTTTA
ACACGGTTTCCATTTGTTTCACACGATGGTGGCATTTGGGGAAAAGATGG
CAAAAATGGAAGTTTTGAGGTAAGAAACAAATGGACTCCATATTTGATTT
TAGGTGAAGAGGTTTTTTAATAGACCTTTTACAATGTTTCGATTTTGCCG
GTTGCACATTTGCATTTGCTAAAAAGTCTGGAGGCAAAACACTTGATGTT
TAGGTGTGAGGCAGTATGTTTTATATAGATATTTCAAAAAGTATAATAAT
ACAAAATCTGCTTGCCTGCAGCTAATGTTGTGATCTTTTTGCCTCAAAAG
CTTGGGTCGTTTTGTGGGCTGTAAGTCGCAAATATATAAATGACATTTCA
AGTTAAGAGGTCTATTAGTGTTGGGACCTCATGTTTCAAATTCTCAACAG
CATTAGCTTTTGGAATGGTATTTTGAATCCAGGTTGTCAGACTCTCGATA
GAATCATTGAAGAAACTAGTGAGTTATGTCTAGGGTCGTTCAAATGAATA
ATTGACAGTTGTACAATCCGACTTCTTTTCCATTTTTCATCAGAGGTCTA
TTCAGCATGTTGCTTGTTAAATATGAGATAACAATCTTTCAGTAAATAGT
TCAATGGAGAAAAAAAGAATTAGTGACATTGATAACAAAAGGCTTGAGAT
ACCCTGCAAGAAAACTAGATTCAACCTCAATGAAGACAACAGCAGCCTTG
TTTCAGATGACATACACCGTAGAAGGATGCAAGTCCTTTCACTGAAAGAG
TTCTGTGAGAAAAGTATTTCAAGATACAATATTTTGCAGAAATATCTAAC
ACTCCATATGTTTTCCATTGTAAGGCAAACCATAATTGATTTGATTGATA
TAGCCGTCTGTGGAGGTGACACAATATCTGCTGATGAATCCTGCTTTGAT
AGCTCTAGCAATGAAACAGGTAACTAAGATCTACAAAAAGGAAACAGTAC
ATTAGACCCTGAATGCTTTTATTAATATAAAAAGTGGTGTCTAGTCTAAA
TCAACAAAACTACAACATATAAAATACAATCAAATGTTATTTAGTACAAT
GCATGGTACTTGAAAAAATAGGACAATGGAATGAATGAGCAGTTGGTAAA
AAAGGCTATTGAACAATAATTATGTTTTTACATTTGATAATCACAGGCCT
GGAAGTAAACAAAAATATTTCAGTGTTAGCAAACAGCACCTTTAAACAAA
AAATCTTCACATTATAGTGTGCACATTCATTAGTTCATCAAATCATATAG
GTCACAATGTTTGGCTTGTCATAATTTGAATTCATTACATTATGTTCATT
TTTTTAGACAATGCAACCAAATGAAAGACCAAAGGTAAATGGATGGACCT
TTTTATCTTTGTATCTTTTTCATACTTTTGAAGATTATGATCCCTGTTTA
CTTTTTTAGGCCAAGTTAAATTGATCTTATGTTTTGCGTAACAGTGGAAA
AAGGCAAATACGGGATGTAGTTTCTTTCGGTCATAAATAAGCAAATGTGG
GACGCTGTTTATTTGGATCGGAAATCAAAATTCAGGGGTCAATTTATAGA
AATCTAAAACATAGATGCGATCGGTCAATTTTTCATAGAAATTAAAGAAA
GTTGATTCGCTCTCTATTCCAACGCCTTTAATCCAGATGGCCTAGTTTTG
CTATTTTGTTTCATGAAACAGTAGTGTTCAAATATCTTGAAAAGTTCTCA
CATTTTCGCACCTCAATTTATGTTGATCATCTGTGGCTCTATGTCAAAAG
TTAAATCTTGTCAATCTCCTCCAGGCCAAAAACATTTCCCATTTTGTTTC
TGAACTTTGGATCAACACTAAATGGCGTCATTTTTCATAAGCATAATTAT
GCAAAATTTGCATTAATTATCTGATTCTGCTTAACGAATCGTGCTTCTTA
TAGATAATGCTTAATAGTCTACTAATCCATTGTCCTGAGATTCACTGCTT
TTAGCTGTATATCAGCTAAAGATATTTTTAGCTAGCACACTCGCTTGGAA
AAACTTGTAAAAATGTTAAATTACGTAATGTTTTACGTATCTGTGAAACA
CCAAATCATGTATATGCAAGAAAATAGGATCATTAAAAATAACACAAAGC
AACAGGCTCAAATAAAGTCTGTTTTCGTTTTACACTTTTTGAAGTATTAT
GGGGCTTTTTTGTGGAGTTGAGGAGTTTGTTATTGTATTCAATTTGTCTT
TTATGATGTATCTTCTGCGTGCACCAACAAAATGTGTTATATATAACACA
GATTTTAGCATTTACAAATAATTTTAGGCGTTTGTCAGCGTGGGGGTATG
CTATAGCACGCAATTTACAGCTAGACCTGCAATAAATTGACCAATTGTGC
TGGGTTTTTGAGATGCAGGCATGTTACGGAAAACATAACATTAATTTAAC
TTGTCACCCTTCGAATAAACGCCCCTCCTGAAATCGAAAAAATTAAAGTA
CAGTAATATGGTATTTTATAATTTGAAAAACATTCTCAAGAGATTTTCGT
AAAAAATACAGTGTTTTTATTTAAAAATTTCAGACTCTTAAGATTCTATT
TTTCACACAGATAGTACCAAAATTTTGTAACTTTTTACCAAGGGATCACC
CTTTTTTGCAGTTAATAGAGCACCAAATTCTAATGTTGCACCACAGTACC
AACTGGCATAATGTCTTGTACTAACTGCTTACCCCCTGAATATGGTATAA
TGCTTAATTTTGATGGATGTGTTTTGTCTTTAATTGAAGTCATTTACTAT
TTTTTTCAGCGACTCTCTCCAAGGGCTATGGCCGAGCATTTTATTCATGC
GAAAGTTGATCCGCAAGATGTTTACAAAAAGTTTATCAACACGTCAAAAG
GTAGATGATGACATTATTTGTTAATTAATCTAATCGTGATCACAAATGAT
TTATTTTTTGAAAGTTCTTTTTAAAACGGCTTAAAATTGCAGAGTTGTCT
GGAGATTAGTAGTATGTTAAAAAAACTGGAAGTTAGCATATTATTAGAAA
GCAGTTTAAAGACTTAGAAAACTATTTTCGTTTTAGGATGGGGAGTATTT
GCAAAAAGAAAATTTCAGAAGTTTGACTTCATATTAGAGTACCGCGGAAT
TTTGCGACAAAAGAATGAAATGGATGTGCTTCAAAGAAAAGGAAAAATTC
AAGACACCTATCTATATGATTTTTCCCACAACGGGCCAAAGTGGTGAGAA
TACAGGCAACAGTTTGAGAGAAATCTAAACGTCAGTTCAGCCCTGCTTTT
TTCTTTGAAAAAGTTGAAAATCGATAAGCTTTGGGAAATTGGGGTACTGA
CTGATATATCAATAACACATTCTTAATTACACTTATTCCCAAAGTTTTCG
TGTGGACTTATTTTCACAAAATCACGGTTCTGTTCCCAAAATTTTCTTAA
TGACTTGATTTCGCGAAAATGGCAGAAATTCGCAAAAACTGTGAAAATTA
ATCCACACAAAAATTTGTCCACTTAAGGTAGACACACAGACAGACAGACA
CAGACAAACAGACAGACATACTAGGATCATAGCTTGAAAGAAGTTGAAAA
TTAGTCACTATTGGCTTAAAACCTTCACCAATCATGCGGTCCTGAAACAT
TTTTGCGAAACTTTCCACTCCAACAAATTTTTATGTTTGAATTCACCCAG
GTTGTGTTCAGCAAACAATTACTTTGACACTGACTTAACAAACTTGACAA
GACATTACATCGACAGAAAACTGAAAGCTTCAGGTTTGTTAAATAGTTGG
CACTCTCTTGTGTTATTGATATAA Coding sequence (CDS) from alignment at sc0000022_pilon:2168098..2174271- >XLOC_045689 ID=XLOC_045689|Name=XLOC_045689|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=912bp|location=Sequence derived from alignment at sc0000022_pilon:2168098..2174271- (Clytia hemisphaerica_ch_hm2_pilon)
AGTGAAGCAGTCATGCGGCGGAAAAAAGAAAGAATATGTCGACCAAAGCA
GCCAAAAAGTGAAGCAGTCATGCGGCGGAAAAAAGAAAGAATATGTCGAC
CAAAGCAGCCAAAAACAATGCAACCAAATGAAAGACCAAAGACAATGCAA
CCAAATGAAAGACCAAAGCGACTCTCTCCAAGGGCTATGGCCGAGCATTT
TATTCATGCGAAAGTTGATCCGCAAGATGTTTACAAAAAGTTTATCAACA
CGTCAAAAGCGACTCTCTCCAAGGGCTATGGCCGAGCATTTTATTCATGC
GAAAGTTGATCCGCAAGATGTTTACAAAAAGTTTATCAACACGTCAAAAG
GATGGGGAGTATTTGCAAAAAGAAAATTTCAGAAGTTTGACTTCATATTA
GAGTACCGCGGAATTTTGCGACAAAAGAATGAAATGGATGTGCTTCAAAG
AAAAGGAAAAATTCAAGACACCTATCTATATGATTTTTCCCACAACGGGC
CAAAGTGGATGGGGAGTATTTGCAAAAAGAAAATTTCAGAAGTTTGACTT
CATATTAGAGTACCGCGGAATTTTGCGACAAAAGAATGAAATGGATGTGC
TTCAAAGAAAAGGAAAAATTCAAGACACCTATCTATATGATTTTTCCCAC
AACGGGCCAAAGTGGTTGTGTTCAGCAAACAATTACTTTGACACTGACTT
AACAAACTTGACAAGACATTACATCGACAGAAAACTGAAAGCTTCAGGTT
TGTTAAATAGTTGGCACTCTCTTGTGTTATTGATATAAGTTGTGTTCAGC
AAACAATTACTTTGACACTGACTTAACAAACTTGACAAGACATTACATCG
ACAGAAAACTGAAAGCTTCAGGTTTGTTAAATAGTTGGCACTCTCTTGTG
TTATTGATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000022_pilon | genome | sc0000022_pilon:2168098..2174271 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 334-456:124 |
| Aaloc | 178-330:737 |
| Aaloc | 85-174:1016 |
| Aaloc | 58-84:2468 |
| Aaloc | 1-57:6175 |
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