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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000193_pilon:91991..95790+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045653 ID=XLOC_045653|Name=XLOC_045653|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3800bp|location=Sequence derived from alignment at sc0000193_pilon:91991..95790+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAGTGAAAGGATTTGTTGACTTGCGGAACTTGGCTCACCGCTGTGCACC
TGGTGTCAGTGGTGGAAAACCTGACTTTGACAACCCTGAGGAGGAATTGT
AAGTATTACCTGTTGGTGCAGGTTGGTGTCGAATAGAGAAGTCTTTGAAA
ACGGGAAATAGAGAGCTAGTCTAGTACTCAGTTGTCCTAAGTACTGATCA
CTACTAGGTAAAAAACAtccatgttcaatgtttttcattgactgtcaatt
gcaaattattgacaaaaaattctttatatTGACTTTCAattggttttttg
aaaagtcaaaGAATAATATTGACCGTTGATATTGATTTTAAACTTCTCAC
GTAATCGTGTTTTGAGCTAGCATCGCCTGTACATCATTCGTACATGTCAA
GGTTTTTACGTGTGTTAAAAACAATGCTTATTGTGTATGTTTTGCCTCAC
CACTGTCTTATAAAATCATATTTTGTTGCAAGGAGGTGTTTCAATTTCTG
ATTCAATTCAAGCTTAAGAACAGTACTTCCTATAATTTGTGATAAtataa
atctttcaaattttgttaCTTTAGGTACCAATGGAATAGTCTAAGCGCGC
TATCTTTGAACACGTTGGAAATGCAGTTGAGCAAGAACTACACTGTCCGT
TGTGGTAACTGGGAAGCGCAATCCCTCTCGCGAAAACAGATCATGTATGC
TGCAAAAGATGCCATCGTATCTTTAGAAATCTTTTACGCTCTCGTTTTGC
TACGTCGAGTTCGACGCCGTCAAGGGCGTGACGTATTAGACGGGATGTTT
GAATCTTCAGTCGATTTTCATAAAATGCTGCAAGGTTTTCAGGAGAGCTC
CTCTTCATGTTTCTACTACTCTCATAGTAAAGACACTCTTAATGATGTGG
ATGCCATTTTGCCGACGGATACACTGAGAACGTCACCTTCTCAAAGTTTA
ACAGAACTTTCTCACTCCTTATGTCAAGGGATAGTAGACATCAAACATAA
ACCGAAACTGGTGATGAATCACAATGTGCAGAAGACAGCATCCAGAGCTT
ACTCCACAACTAAACAAACAACAACTCAACTAGACAAAACATCTAAACGT
TATAACCATCAATGTAGAGATAAACCATTGTATGAAAACTGCTTTCTGAT
TGGTCCAGATAAACAAGTACTGGCAACTGTCAATCGTACAAAAGCAGAAT
GGTATTTACACAAAAATATTGGTATGGAAGTTTTGTAGTGTTGTCTAAGG
TCGATTGCATATCGTTTTTCACTTTTAGATACAACCATATGTATGACTGA
ATATTAGTAAGGGGCTTTCTTAGAACTTGTAACATAATTTCCGGAGTAAA
AGTTTTTGACTgtgtaaaaaaaacttagagaCTTTTCTGAAAAGGCTTAC
GTGAATGTTTTTGTGCTAAAACTGTCAGGTCAGGAAAGCACgtgtaaaaa
tgaacattttttggtaccattggagtATTAAATTTCGAGGAAAAACATAC
TACAAGCAAAATATCCCTAACtcgattatatttttcaaggtCGAAGTCCT
GTCAGTTTCATTACAACTGACGTCAGATTCCATACACTTGATATAACAGA
ATTTCTAActtttgttatgttttcttgGGATATGTAGTATGTACACTATT
ccgctcagaatttcatgctttatCTGAATGAATTTTATCATTCACTTAAT
TCATTCGTCCAGGAGTCATCCACATAGTACGTGCGCAAAAACTCTCCAGA
TTTTTGCcacccctcccccttgtacacAGGGAACAATTTAGAAATGCCGT
CATTCAAACAATAgacgtacgcttttgctaaaccccctctcccctcTTCG
CTGCGTACATACTATAGTGATGGCCCCAAGGCATAATTCATGTACCACCT
GTCGTGTACCCTATGTCCTAAGGAATGTTCCCTTACTTATAGTGTACGac
atttttgataaaagtcaggtagtttctttttgaaaagtttatttttaggT
TTCTTACCAAGCAAGAGATATCATTTAATCGGATTTAAATTTCGCGGTAT
TTAAATTTTCGGGATTTATTTAGCGGGTcagcattttcaaatattttgcg
tggaTTTAACTTCGGAAAGCGGCGAATAAAATTCAGTTGAGAATGACACT
GAAAAACGCCAATTTGTTAAAAATCTCCCGAATCAACTTCCTCACGGGAT
TCTGTGCATTTTTTCCgcgaaaaaagggaaaaatttgcgaaaacgtgaaa
ttaaatctcacaaaaatTAATCCTAATCttcagttttctgaatagattga
tgaatttattttttattaattttcaggaGTCGTTGAAAAGGATGAACCAT
TCACTGTCCGGTTATTATTCGAGCCTTCCGGAAAACCAAAACCGGACGCT
GACTACTACACAACAGTCAAAGAAAACGTATGTACCGTGTGTGGTAGTAC
CGAGAATTTCGTCAAGAAGAACATCATTCCTCATGATTATCGGAAATATT
TTCCACAGCAGATGAAAGACCACATGTCACATGATGTCCTTTTGTTCTGT
ATAGATTGTCATCGGTGAGattgcttttttttcttctgataGAAAGGGTT
TCATATGACGGTTATGATATGATGATACTATTGAGATGATAATCTGATAG
ATTTCCCACTTTAATGCTCATAATGATCTGTATTGCCTTTTCTGAAATTC
AGTTGTAATCTAAAATCAAGTCATacaccatgttcacacgttaatgttcc
gtttcgctccggtatgattttcgttacggatcgagtgtgtttaTATTGGT
TTTGGTACGtgttcggagcaagaaaacggagtgCAGTTCCGTTCTGaagg
ccggtgtccactttcgcgcgaaacttttcacgttatttgtaacgtcattg
gttgattgaaaaaagaagcaattccattgttcaaaattgacgtaacggtt
gaaaaaagtttaactcccttcaactttttttttgttcgcgcgaaactttt
ttatgacgtaatcctttcttcaggcaaaaacggttaagaaaaaatctttc
gcgCGCTTCACAcgaaagtggacaccggccttgatgaaaaaagtggagcg
aaaccgtttcgatctgttttgctttgtaatgtcttcttttttgacgtttc
caattttgacgttcacacttgtttcggaaccgtttcgtctGAACATAGGC
ATAATCTATTTCCTGCTCTTTGCCACTAGTGGGACTAGAATATATCTTGT
CAGCATAAACTTCTCTTTATTAGGAAGAAGAATATGGGTTGACGTATTTT
AGTTTTATATCCACCTAGTTACTCAAATGCGTACGATTATTTACTTTTTC
AGTACTGCACAATACTTTGACGACCAAGTACGACAAGACCTTGCCACCAA
GTATAAAGCTCCCCTCGGTACCAAACAAAATATGTTTAAAACGGACAACC
CTCAGCTCGGGCGTGTGCGATCAGCCGCCAAAGCGCTATTAAAGAATTCT
GCTAACATTCCAACAGCTAGACGTGAAGAACTAGAAGCcataattttaaa
ccacttCAAGGTGAATTCGGTTAATACACAATTACTTAAAGACACTATGG
ATATGGATATACGCGTTGAGAACAACAAATTCTTAGGATTACATGGCGAG
AGGGTCGTAAAAGGGCTGTTAGAAGAGAATGATTTAATAGAATTCATTAA
GATGTGGAGACAACGTTTCTTGGATACAATGAAACCCAAATTTCTACCAC
CGCTTTGGTCTGTTGATCACAATCTACAGAAATTCAACGCCTCAAATTGA
Coding sequence (CDS) from alignment at sc0000193_pilon:91991..95790+ >XLOC_045653 ID=XLOC_045653|Name=XLOC_045653|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2862bp|location=Sequence derived from alignment at sc0000193_pilon:91991..95790+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAGTGAAAGGATTTGTTGACTTGCGGAACTTGGCTCACCGCTGTGCACC
TGGTGTCAGTGGTGGAAAACCTGACTTTGACAACCCTGAGGAGGAATTCA
AGTGAAAGGATTTGTTGACTTGCGGAACTTGGCTCACCGCTGTGCACCTG
GTGTCAGTGGTGGAAAACCTGACTTTGACAACCCTGAGGAGGAATTGTAC
CAATGGAATAGTCTAAGCGCGCTATCTTTGAACACGTTGGAAATGCAGTT
GAGCAAGAACTACACTGTCCGTTGTGGTAACTGGGAAGCGCAATCCCTCT
CGCGAAAACAGATCATGTATGCTGCAAAAGATGCCATCGTATCTTTAGAA
ATCTTTTACGCTCTCGTTTTGCTACGTCGAGTTCGACGCCGTCAAGGGCG
TGACGTATTAGACGGGATGTTTGAATCTTCAGTCGATTTTCATAAAATGC
TGCAAGGTTTTCAGGAGAGCTCCTCTTCATGTTTCTACTACTCTCATAGT
AAAGACACTCTTAATGATGTGGATGCCATTTTGCCGACGGATACACTGAG
AACGTCACCTTCTCAAAGTTTAACAGAACTTTCTCACTCCTTATGTCAAG
GGATAGTAGACATCAAACATAAACCGAAACTGGTGATGAATCACAATGTG
CAGAAGACAGCATCCAGAGCTTACTCCACAACTAAACAAACAACAACTCA
ACTAGACAAAACATCTAAACGTTATAACCATCAATGTAGAGATAAACCAT
TGTATGAAAACTGCTTTCTGATTGGTCCAGATAAACAAGTACTGGCAACT
GTCAATCGTACAAAAGCAGAATGGTATTTACACAAAAATATTGGTACCAA
TGGAATAGTCTAAGCGCGCTATCTTTGAACACGTTGGAAATGCAGTTGAG
CAAGAACTACACTGTCCGTTGTGGTAACTGGGAAGCGCAATCCCTCTCGC
GAAAACAGATCATGTATGCTGCAAAAGATGCCATCGTATCTTTAGAAATC
TTTTACGCTCTCGTTTTGCTACGTCGAGTTCGACGCCGTCAAGGGCGTGA
CGTATTAGACGGGATGTTTGAATCTTCAGTCGATTTTCATAAAATGCTGC
AAGGTTTTCAGGAGAGCTCCTCTTCATGTTTCTACTACTCTCATAGTAAA
GACACTCTTAATGATGTGGATGCCATTTTGCCGACGGATACACTGAGAAC
GTCACCTTCTCAAAGTTTAACAGAACTTTCTCACTCCTTATGTCAAGGGA
TAGTAGACATCAAACATAAACCGAAACTGGTGATGAATCACAATGTGCAG
AAGACAGCATCCAGAGCTTACTCCACAACTAAACAAACAACAACTCAACT
AGACAAAACATCTAAACGTTATAACCATCAATGTAGAGATAAACCATTGT
ATGAAAACTGCTTTCTGATTGGTCCAGATAAACAAGTACTGGCAACTGTC
AATCGTACAAAAGCAGAATGGTATTTACACAAAAATATTGgaGTCGTTGA
AAAGGATGAACCATTCACTGTCCGGTTATTATTCGAGCCTTCCGGAAAAC
CAAAACCGGACGCTGACTACTACACAACAGTCAAAGAAAACGTATGTACC
GTGTGTGGTAGTACCGAGAATTTCGTCAAGAAGAACATCATTCCTCATGA
TTATCGGAAATATTTTCCACAGCAGATGAAAGACCACATGTCACATGATG
TCCTTTTGTTCTGTATAGATTGTCATCGgaGTCGTTGAAAAGGATGAACC
ATTCACTGTCCGGTTATTATTCGAGCCTTCCGGAAAACCAAAACCGGACG
CTGACTACTACACAACAGTCAAAGAAAACGTATGTACCGTGTGTGGTAGT
ACCGAGAATTTCGTCAAGAAGAACATCATTCCTCATGATTATCGGAAATA
TTTTCCACAGCAGATGAAAGACCACATGTCACATGATGTCCTTTTGTTCT
GTATAGATTGTCATCGTACTGCACAATACTTTGACGACCAAGTACGACAA
GACCTTGCCACCAAGTATAAAGCTCCCCTCGGTACCAAACAAAATATGTT
TAAAACGGACAACCCTCAGCTCGGGCGTGTGCGATCAGCCGCCAAAGCGC
TATTAAAGAATTCTGCTAACATTCCAACAGCTAGACGTGAAGAACTAGAA
GCcataattttaaaccacttCAAGGTGAATTCGGTTAATACACAATTACT
TAAAGACACTATGGATATGGATATACGCGTTGAGAACAACAAATTCTTAG
GATTACATGGCGAGAGGGTCGTAAAAGGGCTGTTAGAAGAGAATGATTTA
ATAGAATTCATTAAGATGTGGAGACAACGTTTCTTGGATACAATGAAACC
CAAATTTCTACCACCGCTTTGGTCTGTTGATCACAATCTACAGAAATTCA
ACGCCTCAAATTGATACTGCACAATACTTTGACGACCAAGTACGACAAGA
CCTTGCCACCAAGTATAAAGCTCCCCTCGGTACCAAACAAAATATGTTTA
AAACGGACAACCCTCAGCTCGGGCGTGTGCGATCAGCCGCCAAAGCGCTA
TTAAAGAATTCTGCTAACATTCCAACAGCTAGACGTGAAGAACTAGAAGC
cataattttaaaccacttCAAGGTGAATTCGGTTAATACACAATTACTTA
AAGACACTATGGATATGGATATACGCGTTGAGAACAACAAATTCTTAGGA
TTACATGGCGAGAGGGTCGTAAAAGGGCTGTTAGAAGAGAATGATTTAAT
AGAATTCATTAAGATGTGGAGACAACGTTTCTTGGATACAATGAAACCCA
AATTTCTACCACCGCTTTGGTCTGTTGATCACAATCTACAGAAATTCAAC
GCCTCAAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000193_pilon | genome | sc0000193_pilon:91991..95790 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 985-1431:3354 |
| Aaloc | 748-981:2329 |
| Aaloc | 100-744:576 |
| Aaloc | 1-96:1 |
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