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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000193_pilon:96882..100761+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045652 ID=XLOC_045652|Name=XLOC_045652|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3880bp|location=Sequence derived from alignment at sc0000193_pilon:96882..100761+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATAGAACAGGAgctcaacaacaaaaaaaattgagtgaaaaagaaga
agagaaaattACTGAAGCTTCAAGAATGCTTGCTAATATACAGGTACCAC
ATTCtttttttCGTCCTTAAATAGGACGCCCCCTGTTGGAACTGCACCTT
GCTTTTTGGTTactacagaaagaaaatttggcggattgacCCGAAATTTG
TCAGATTAAGTTCACGTTCAAAATTTCTCATTCTGGCCATCTGTCAAATT
TACTAACGATTTTGGCAAAACATCCCTCAACCGCCAAATCAAATTCCTGC
CAATTTTATCTTCTCTAGCGATCCGCCAAATCAATTTCATCCTGCTGAAA
TTTCAAAGCACATGAAACTTTTATGTATAAGCCATCAAATTTTGAGTTAA
AATATTAACCAGGTCGGGTTTTACGACTTTATTGCCAACACAGATTGTAA
AACCCAATCAATCCAAATTACTTCAAATTTTACAGAATGAAGATTTGTTT
CAGGTTACTCTTTATTTATCAAAATCGGAGGCCCATGATGTTCTTATAcc
gggtgtgtcaaaaaaaacgcgcctatttttctatttttgacgtacaaatt
tctatcaaacaaagacaaatgaaattttcagggaagatttgaaatttaat
tttttatccttggtgaaaattatacatttctATGTTCATTTAAAACGACT
TTATGATAATTCCGCTGACTTATGTCAAATTTTCATTGTTCACAGATTTT
CATAGTTAAATTTTTCCATATAAACAAGAAGCTAAAGTACGCTTCGtttt
tactcttttattttgttttgctactattaaaatattaaaatggcatcatt
ttttcatttcataggtTAAGTTTTGTTCCAGGGTCAATATTTGATAAATT
CTAACTAGTTCCAACCAAGCCATTTCTTACGTCAATTGCGACAACaaaaa
aaGGACTTTCAAATCGTTAATGGTGCAGAAATGATCCGATGTTATTACCT
TTTGTACAGCAAAATCCTTAGGTTTTTAGTTAAAGTGTTttgcaaaaagt
taaagaagcAGAACAGAGCTTGTGGAATATAATATGATTGATTAAATACT
GGAAATGAAACGaattggtgaaatAttgttttgctaAGAAATGCCTTACA
TTGCCTTGAACACCTTGAGATGTTACGATAACACTGCAAAAAGATGCCCA
AAACCcctttaatttcaaaacaatataaGTTTGACAATAAAGAATTTTGG
CTTAGTAGTAATATTCCCTTTCTACATCTAGATTAAACttaaatttcact
ttaaaacGGTTTTTACAGCTGATAGGACAGCTAGACTGTAAAGGTTTGAC
GTcttctttgacgtcaattaatTGCTTCTGTGAACAACACAAAAAGTAGT
GATCTTCTGAGAATATTTATAACTTTAAATTCGTTTGAGGTAACTCTGCC
AAAGTTTGAGAAATGTTTGGAAATAAAATATACTGtactcacaaaaaaat
tcaagcagCTCAACTGAATAGAAAAATGTACGTCAAAGATTGTAAAATAG
GGGcgttttttttgacacacccggTATCAATTCTTTCTAACGTTTTGCCA
ATTCAGTTACCAGTTCCTCTTTAGATCCCTCCCTATGAAGAAGTGTGTTT
TTAACTAACTCATCCACTTTAAAATTAGTACGGAAgccatacacgctttt
ttttttataagaatacactttataagaatgtccatgatgaaaatggctaa
aaaattaagaatatgctaagaatatcaccatcatggaattttgctactca
agctaagaatgtcatttttagagcattttaaattataaattgccaattac
ccccaagtaataagaatgctgtaagcatattttaggatgattttcccaaa
aaagttaagaatattcatgatgaaatggatttacaccatttttataaata
aaagcgTGTAGTTTAAGTAACTACTGTAATAGTTTCAAAAAGACTgatca
aaactattttttttgtttcggtTCTCAATTTGTAAATTAGTGTGATGAAG
TTAATCGTTTTAACCTCTTCCAAAACTAGTGGATTTTTAACACTTTAGCC
GATTGCAAAACGTTTAATGTATATCTAACATATAGTCGaacttttgtgaa
aatttctatGTCGAGTGCTAGATAAACTAAGACTCTCTTTTGTGAGCACA
ATATTAAAAAAGGTCTTTATAGAATATCTTCCGTAAGCTCATTGTTTTCT
TCTTAGGACCAAGAAGATATTTGGGCTCAAGACACAGCCAAGCTTGAAGT
TGCATCAAAGACAAGTTTTCATGACAATAACAAACAATCACCACATCGAT
TGATCGATCAAACTTTACACATGAGTGTTCGAGATGATAGTTTATTAAAC
GAATCCTCTACCGTGCTTCCCTATACACCCTTGAACGAAGGAGAAACTCT
GCGACAGGTAATTTGATATCTTTAACAACGCTGGTAACATTGCGCTTTAT
GTGGATGTTAgggacgttagatgaacgttgattCAATGACGTTTTTTGCC
AGCTTTGTCCGGAGATCAGAAAATAGTAGGAGGCCAACCTTTAGAATCAA
TAGCATCCGATGGTATCAGTCATTCTCGTTtaatttgagtttgaaaaata
tgtaGTCAATCTTTTACTAATTTTTGGGGTTTTGCTTACAATGTCAGTTT
TTTAGCCATAAAGACTTTTGCGAGGCCTAATTCGCGCActctcaaaaatg
ttccaaaatcctatctttcgaaccaatcacatgcgCTTGAGTTCCAAGAA
AGAGGCTACGGATCCTGAAGGTTTTTCACGTCCAAGGCCAGCTGGATCGA
CTATCATTGAGCTGAACGGATCATTGGAAAGAGCAGGGATTCGAACCGTG
AACCCCTTGTTTCTGGAGCTGGAGCTTTAACCATTCGGCCATCACTCCTA
AACTTTTTCGTCTCGTTTCCTTTCTTTGAAAGAACCTTTCAATATTAATC
CTCAATCAATTAGCTCTAGAAAGGCGACGTTTTCGGTTTTCAATTTGCCA
TGACATACCAATCTATAAATCTTTAATGAAATAAGTCTTctcaatagatc
ttatcggagtttttgatttttccaaaaaagcgaTGCAACgggggattgtt
tcgggggtattacaatgcAAATCTCTTAGGacttcctcgagggaattcta
ttgtaatacccccaaaacaatcccacaatgcatcgctgttttagaaaaat
caaacatttcgataaggtctattctACCTATTTTCGTCCTGACCAAAACT
TTCGTCGAAAAGATAAGCATCGGATTATTatgttaagaaaaaaatttatt
ttcttcttctatcAGGCATCAGAACGTCTCCTAGGGACGTACGGTATTCC
AGCATCCAATACGTTGTTTCTTTCCAATGCACCCTGTGGAGTGATCAAGA
TTCGTTTCAAGGAGAACGAAGAACGTGGACAGGTCTTCCAAGGTGCTAAG
GTGAGGCGACGAGACAAgcgaaaaattcataaatctacttaactcgaacc
tttattactcaaaaagaggaaaagaaaaacattttttttgcttatatcag
cataatgtaATACtattatatcagcataatataacaataggcataAACTG
CCCTGATATGGACTATGTGCCTGTCGTGAAACGGGAAcgcttatgtaaaa
ataaaacctttaagctgAATAAATCtacgtttttattttcaggtattcTT
TACCAAGGTTCGTATGACGTCACTGGATAACATCGACACTCAAAATACCC
AACGCGACTGGTTATCGGTCAGTGAAATACAAGAACAATCCCAAATCGAA
TATTTTCAAAGGCTTGAACGGTTTTtatag Coding sequence (CDS) from alignment at sc0000193_pilon:96882..100761+ >XLOC_045652 ID=XLOC_045652|Name=XLOC_045652|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1134bp|location=Sequence derived from alignment at sc0000193_pilon:96882..100761+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATAGAACAGGAgctcaacaacaaaaaaaattgagtgaaaaagaaga
agagaaaattACTGAAGCTTCAAGAATGCTTGCTAATATACAGATGAATA
GAACAGGAgctcaacaacaaaaaaaattgagtgaaaaagaagaagagaaa
attACTGAAGCTTCAAGAATGCTTGCTAATATACAGGACCAAGAAGATAT
TTGGGCTCAAGACACAGCCAAGCTTGAAGTTGCATCAAAGACAAGTTTTC
ATGACAATAACAAACAATCACCACATCGATTGATCGATCAAACTTTACAC
ATGAGTGTTCGAGATGATAGTTTATTAAACGAATCCTCTACCGTGCTTCC
CTATACACCCTTGAACGAAGGAGAAACTCTGCGACAGGACCAAGAAGATA
TTTGGGCTCAAGACACAGCCAAGCTTGAAGTTGCATCAAAGACAAGTTTT
CATGACAATAACAAACAATCACCACATCGATTGATCGATCAAACTTTACA
CATGAGTGTTCGAGATGATAGTTTATTAAACGAATCCTCTACCGTGCTTC
CCTATACACCCTTGAACGAAGGAGAAACTCTGCGACAGGCATCAGAACGT
CTCCTAGGGACGTACGGTATTCCAGCATCCAATACGTTGTTTCTTTCCAA
TGCACCCTGTGGAGTGATCAAGATTCGTTTCAAGGAGAACGAAGAACGTG
GACAGGTCTTCCAAGGTGCTAAGGCATCAGAACGTCTCCTAGGGACGTAC
GGTATTCCAGCATCCAATACGTTGTTTCTTTCCAATGCACCCTGTGGAGT
GATCAAGATTCGTTTCAAGGAGAACGAAGAACGTGGACAGGTCTTCCAAG
GTGCTAAGgtattcTTTACCAAGGTTCGTATGACGTCACTGGATAACATC
GACACTCAAAATACCCAACGCGACTGGTTATCGGTCAGTGAAATACAAGA
ACAATCCCAAATCGAATATTTTCAAAGGCTTGAACGGTTTTtataggtat
tcTTTACCAAGGTTCGTATGACGTCACTGGATAACATCGACACTCAAAAT
ACCCAACGCGACTGGTTATCGGTCAGTGAAATACAAGAACAATCCCAAAT
CGAATATTTTCAAAGGCTTGAACGGTTTTtatag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000193_pilon | genome | sc0000193_pilon:96882..100761 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 430-567:3743 |
| Aaloc | 295-429:3366 |
| Aaloc | 94-294:2257 |
| Aaloc | 1-93:1 |
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