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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000193_pilon:162020..165884+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045650 ID=XLOC_045650|Name=XLOC_045650|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3865bp|location=Sequence derived from alignment at sc0000193_pilon:162020..165884+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACTTCTGAGTTATTATGTTAGCATTTTGGTCATCGCAAAATCAGG
TATGTGTTGTCTTAATTATCAATGGCAATGAGCAGTATAGCGTTGTGGCA
GGGAgggccgaagagcaaggggcgccaaaagatatttttttgtacgccca
aattttaaaaatcatattttatgcgccttaaattgcgccccaggaccaat
tttacttagataattttaaatttcctccaattttttaaagttgattggta
acttctttgcaatctagctaatttacaagtttttttgtgtacaatatagc
attattaaataaaaatctaactgcgccccgagaccaatttgctgacaaca
atattgaaatcataaaacatcaattgtttCGCTCACTTCTCTCGCTCTAC
ACATTGcttctttcttttcactctagcaagagtcaaatttgtctattttt
atttagtgatttagggtatcttgtccattttcaacattttcaatatttcc
ttTCTCGTTATTCCcgctaggcaaatgaattagtaaaattGGGTGGGTGG
GAgtgccactttggaaaattgggggcgccatttaaaaaaaaattgacttt
ggcccctccagaaaaattttcccacaacgccactgccaATGAGCGGATGA
AGATTGAAGGATTGATTGATTATCTTTGTTCATATTGACCGGGAAATTAT
AATCTGGAAAATTGTTGTCACGGGTCCCTTTACTCTtactaatttaaaaa
ataattgccGAAATTTAAATAAATCTGAACCTGGATAATTCAGggatatt
gaaaattattagtGAGCTACTAaagcgagaccaatttaatttgttgtttt
acgggcagatcgttagcaaagtATGAGTCAGTCggtctgtaaaaaaaaaa
tatatattttcattaatCAACGAAGATAATTAGGCCTTAAGTAATATttt
tgttaagttttttttttgaaataaaatctttcgtgcATAGAATTCATGAT
TCTAGATTCTAGAATCCACGATTCCagattcttttcaactttttgtaagt
taaattttttaaatgactagtattagaaatttgtggcataggaaattcaa
tattattattttttcgtttgcagCAAATGCTAGGTCGGCcgcgcccgtag
aacaacaaattaaattggcctcgcctaagAAAAGTATTCTACATTGCAAT
AGATTTGCAATATACTCTACGACATCTGTGTCAGTACCCCTGTCGTCATC
GTTTAGGTAGTTGGATAAACTAATCTGGTATATTTGCAATGGGAATAAAG
ATATGTCGTTTAAAATGCTTGGGAtttccccagctggcacacaacgttat
ctaacgctcacaacgtccatttaacgtcaAATGAACGTTGAAACATTGTT
GTGTCAGCTGCtgggtttaaaatcttttgtttctagCCAAATTTGAAGTA
AATGTAAAGCCATATTAATTTCATTTCAGTTAAAAGTCAGTCGGCAAACT
CAATGACACCAAGAAGAGATCGGGCGCCATTGGGAGATTGCTACCAGTGT
GGTCAAGGAAGCGCATACAACAACAAAGAAGCTTGTATCGGAAACCAACG
ATTACAACCATGTATCGGGCCAAACAAAGTTTGCAGAACACTTCACATTT
ATAACGAACATAAATTCCCGAACGGTACAACAATCATGTATAGAGAACAT
TATAAGAAATCGTGCGAAACTGCTGACCCTAAGGGATGTGATTCAAAGtg
ttatttttacagaaaagaAGGAAGAGCTTGCAAGGTAACTCTAACATTTC
ATCGAACAGTCAGTGAGGTGATTGTCGTTTAAGAATTTCTTCACCAATTC
TCAACAAATTAtagttcaatatttcaaaatattttgtaaactttttacAA
TCAGTGCCGAAATATTTGGcgcaaaaggggaattccctcaaaactttaaa
agcgcaagtgctttaaagtacgtTTGGAAAGCAGAGTCTTAACTCTGAGT
TTCAACATTAGTCTTAAGACTTATGATCTCAGGATataaagctaaaaaat
attccaatatggctgagaatatagcctggaagccaatTCACCCCTCCCAA
Acagaaaaatccaatgaaacaaagtgaaagtactgaaactgcaattctcg
ccaaagctttaaattctaaaatacgttaaaatctcaaaaattgccaatat
atttcgatgCTTGCCCCTTTtgaagagtgtttttttttactttttaagaa
AAGGATATATAAGTGCCCTTAGCGCTCAGATCCGGGGGGAAGCTGACGGG
AATgtaccgcccgactttcgacccttggacccAATTttgactaatttgac
caatatttcaatatttttggggcAAAACATGCCCTTAACCTTCAATTGCC
CATTGTCTATTTTTCATAGTATCAAATGACggtttctgaaacaaaaatag
tttcaaaaaacttttcaactgAGTTTCTGTCTAGACAGAAACAGTCGCAG
CAAACCTTTGAAAATTCTCATAGTAGTTATACGACAGTggcaaaaattgt
tttgctgagATTTCTTTGAGGCGGGTAGGCCACTTAAAACAAAGTTTAGC
GATTGACCTGCAGCTTGTTTAtgtttaattttgatgaaaattgtttCAAG
TGGTCCGAGACTTTCAGAAAACATTGGTCCGAGCCGAATTTGTTGAACCT
ACagacccctgtgtcacagactcgctgggaccccagcaccactgaaaatt
tggcaaaaatttcgtccccggtgggaaaataccctggaatttcagcccca
ctgggaaatttaccttgatttcatccccattcaaaattcaatgtttaaaa
atggcacttcaaaaccatccccactggaatttcattttaactttagaaca
atagaatttctatcccccattggaatttcaatagaaatttttatccccac
cgagggaaaaagttccaccggggctgtgagacaggcgTGTATTTACAGAA
AAGCTTCCAGATGTTTAACAAGTTTACTAGATTGCAAATACTCCTTCTTA
GAACCTATTCTTTTTAACAAGTGGGTAGTCTAGACGACCAGTGACTTAAG
CAATAACATAAGCAAATGCAAGAAAAAATGGAATCAACAAATTGTATTGG
CAAATCTTGTTATCATATAACAGTAAAATTACTGTATTACATTGATTATA
GATAACTCTAGACTAACATTTAGCGTTGTTGTAATGGTGAACTGCATAGA
TCTAATAGTGATTTCTATGAATTTACTATCGCTAGAAAGGCGATTATGTC
ACGTGACATGCTTCTATATAAGCTCCCCAGATGGATCAGTGAATCACACT
TCATTAGAATTGATAGCCCACCCAATCGCGAGGAAATTATCAAATCAGCA
GTTGACGGAATATAGTTCTTTTTGCGTCATGTATACAATTTATAAGCACT
TATATTTACGTTTACACGCTCCGTCTtgcacccagctggcacacaacgtt
gttttaacgttcaaataacgttatttggacgttatgaatgtcacatggac
gttgttttgacgttgtgtgccgtctgggtaCATTCTCTAGCTGACCCTAC
TACGTGAAAGAAATATATACTGATTAAGATGATAAATAAAGTTACTTTCG
TTTGAGTttacgaattagaaaataatacAATTTCCATTCTACCATTCTAG
ATGCAATGTTGTGCTTACCACGCGTGCAACCAAGACGTCCAGTTCGACAG
ACCGAAAGCACGAGTATCTGAAAGTGTGAGACCAGCTCTTCAGTACGACT
CATCAGCATCAACTCTATCAGCAACTCTCATTTCTACCCTGATTATATTG
CTACACTTGATATAG Coding sequence (CDS) from alignment at sc0000193_pilon:162020..165884+ >XLOC_045650 ID=XLOC_045650|Name=XLOC_045650|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000193_pilon:162020..165884+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACTTCTGAGTTATTATGTTAGCATTTTGGTCATCGCAAAATCAGA
TGGAACTTCTGAGTTATTATGTTAGCATTTTGGTCATCGCAAAATCAGTT
AAAAGTCAGTCGGCAAACTCAATGACACCAAGAAGAGATCGGGCGCCATT
GGGAGATTGCTACCAGTGTGGTCAAGGAAGCGCATACAACAACAAAGAAG
CTTGTATCGGAAACCAACGATTACAACCATGTATCGGGCCAAACAAAGTT
TGCAGAACACTTCACATTTATAACGAACATAAATTCCCGAACGGTACAAC
AATCATGTATAGAGAACATTATAAGAAATCGTGCGAAACTGCTGACCCTA
AGGGATGTGATTCAAAGtgttatttttacagaaaagaAGGAAGAGCTTGC
AAGTTAAAAGTCAGTCGGCAAACTCAATGACACCAAGAAGAGATCGGGCG
CCATTGGGAGATTGCTACCAGTGTGGTCAAGGAAGCGCATACAACAACAA
AGAAGCTTGTATCGGAAACCAACGATTACAACCATGTATCGGGCCAAACA
AAGTTTGCAGAACACTTCACATTTATAACGAACATAAATTCCCGAACGGT
ACAACAATCATGTATAGAGAACATTATAAGAAATCGTGCGAAACTGCTGA
CCCTAAGGGATGTGATTCAAAGtgttatttttacagaaaagaAGGAAGAG
CTTGCAAGATGCAATGTTGTGCTTACCACGCGTGCAACCAAGACGTCCAG
TTCGACAGACCGAAAGCACGAGTATCTGAAAGTGTGAGACCAGCTCTTCA
GTACGACTCATCAGCATCAACTCTATCAGCAACTCTCATTTCTACCCTGA
TTATATTGCTACACTTGATATAGATGCAATGTTGTGCTTACCACGCGTGC
AACCAAGACGTCCAGTTCGACAGACCGAAAGCACGAGTATCTGAAAGTGT
GAGACCAGCTCTTCAGTACGACTCATCAGCATCAACTCTATCAGCAACTC
TCATTTCTACCCTGATTATATTGCTACACTTGATATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000193_pilon | genome | sc0000193_pilon:162020..165884 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 355-519:3701 |
| Aaloc | 52-354:1482 |
| Aaloc | 1-48:1 |
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