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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000393_pilon:190997..195060- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045645 ID=XLOC_045645|Name=XLOC_045645|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4064bp|location=Sequence derived from alignment at sc0000393_pilon:190997..195060- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTTGTTGCTGTTCAACAGTTTCAAGTCTGGATAACCAGTTTGAATC
AGTTGAAACTGTTGGTAACAGTCGTGCACGATGGATGACTAACCTAGATG
CCAGCTTTACTACTAAACCAATAACTAAGCTAGCGATTCCTGGTAGTCAT
GATTGTGGTGCTTACTTTCTTGATGCAAGTGGACCTGTCTGCCCTGGTAA
GTAATGTCATATTATAGACTTGCCACAGACCCGCTGGGACCCCAGCCCTA
CTAGAAAATTTGGCAAAAATTTCGTCCCTGGTGGAAATATACCCCGGAAT
TTCAGCCCCATTGGGAAATTCACGTTCGAAATTCAGTGTTTTAAAACTGT
GCAATCCCCACTGGGAACAATAGAATTTCTTTCCTCATTGAGATTTCAAT
AGGAATTTTCATCCCCACTGAGGAAAAAAGTCCCATCGGGGCTGAGAGAC
AGGGGTGTATAGACAGACAGAAGAGCTCTGTTTTATCAAAGGGATGTCTA
TTAATATACGATGACCATAGTATAAATTGTAGAGCATTTGCAATCCCCGG
CCAGGTCATACCAAAAACTTCATACTTAGTACAAAATGGTACTTGAAGCC
CTTCTGCTTGACGGCGCTCAGCAATTAAGGGAATGATCAAGGATAAGTCA
AGTGAAGCAATACAGGGAAAAAGAGTAGCCCCCACCTGCTGGTTGATAGC
TATCGAAAAAGAAGCCTTTGGGTCACAGACTTACTTAATTTTACTCACCC
CTATGATGAAAGAATAATTCGTGCACAGTTTTTTGACGAGTGTTTCTCAT
TGACTTTGGAGAACATGGTCAAGTCATATACTAATACATCTGCCAATGCA
GTATATTCTTGAAAGCGATATAGGCCATTTCACAGTCGAAAAGAATATCA
TGAGTTATCAGACACATGGCTTTGATAAAAACTTTTGATAACGCTGTAAA
AGTTTCGCTCTCTTACAAACGGGGCACAATAAGTCCTGATAGCCCATGAT
TTATTCCGACAGAGAATGTTGGATCCGTGAAATTCATGACGTAATGATCT
ATACAGAAAATACCCGAAATAGACCGGTTGTTGTCACTAAAAAGTCTGTC
CAGATATAATTGGCAGTGGAAACAAGAATGCCTGTAACTTTTGATAGTCA
AATATAATTATGGAAAATTTTTTTTGCTTGTTTTAGAGAATCAAAAGCGC
TATATTTGAATGTATTTTTGGTTAAAAAATTCGCGATTTTTAGCGGTTTA
ATTTGCAATTGTAAAAATTAAGCTTTTTTTCTACTTATGCTATAACGTTC
ATTTTTACACCAGTGGTAGTGCAACCTTAGGTTAAGAAGTTTGTTAAATT
TCAAGGCAAACAGAAAAGTCCTTCGGAAGATATGGGACCCGAAATACCCC
TTGGTAGCACTTTTCTGTGAAATATCAAATCTCCAACTTATTACTAAAAA
CGGGGGTAGTGATATGATTGATGAAACAGTTTTTCGATCATAACACATTT
TACAATCTCTTTAATGACCTCATAGCCAAACTGTGTTTAGTGTTTTGGGA
ATTAGCAAAGTTCTTGAATGACTTAAAAATAACAAAGGCAATATAAGTTC
ATGCTTATCCTTTCAATAAAAACAATTATACTGTATGATTTCACTTCGTT
TCGAAATAATCAATGATACCAATAATACCAATGCACCAACACTTAACATT
TAACTTTTAATTGCACTATTCAAAAAAGATAACATAACCCCCGTTTTTAG
TAATAAGTTGGAGATTTGATATTTCACAGAAAAGTGCTACCAAGGGGTAT
TTCGGGTCCCATATCTTCCGAAGAACTTTTCTGTTTGCGTTGAAATTTAA
CAAACTTCTTAACCTAAGGTTGAACTACCACTGGTGTAAAAATGAACGTT
ATAGCATAAGTAGAAAAAAAGCTCAATTTTTACAATCGCAAATTAAACCG
CTAAAAATCGCAAATTTTCAACCAAAAATACATTCAAATATAGCGCTTTT
GATATTCTAAAACAAGCAAAAAAAATTTCCATAATTATATTTGACTATCA
AAAGTTACAGGCATTCTTGTTTCCACTGCCAATTATATCTGGACAGACTT
TAATTTTGAATTTAAACATACACATTTTTTTATAAGCACGCGAGTTGCTA
ATGGTCCAGTTCTGAGACAATTAAACCATAGTATAAGAAAGCCGCGGCTG
GAACGAGTACGGCTGAATTTCTGTTGTTCTATCTATGTCGTAAGAACGAC
TTTTTTTATGGTTCAGTGACAATTCCCATTGTCCATTTAATTTGACTTTT
CACAAACTCCTTCGTTAGACGTAATTTTGCTCATAAACACAAGTCCCTTG
ATAATTCACACATTCATAAGACCAAAGTAAAAGAAAAGACTCTTGGTTTA
AAAGTATTAGAAAGATCAATATGTGAGTGCTTTAAGAACTTGAAGAAAAT
TAGGTGCCTCGAAATGCCTTCCTGATTATTCGGAAAAATTCTTACTGGTA
TTAGTAAATAAATATTCAAGCAGTATTCTGTGAAAATTTCATTTGAGAAA
CAACAGTATTGAGATGACAGCAAGCATTCAAAGTTTAACATTTGAAAATT
AGTTCTTGTAATAAAATGTGCGTTATTTGGTCCAAAATTTATAAAAATTT
ATTTGAAATCTATAAAAATATACTCTAAGCAAGCTAATTAGAGAGGACAG
TGAGAAAAATTTGACATTTGAAAAGTGATTGTTCTTCAATTGAATGTTAT
GAACACTTTTAAAGTTAAGGATTTTGTTACCTTCGACTTAGTTCTTATAA
ACCACGGAGACACAGATAGAACATCCATTAACGACAAAAACAATACCGTC
ATCATTCCAGCCGCGGCTTTCTTACACTATGATTAAACAATAAGCCTTAG
CAACCTAGCCCTGAAACTGAGCATGCACCGGGAAAGCAATCAAAAGTAGC
TAAAAAGGAGGCATTTTCTTATAATAGTTAGAATACCAAATTTGAGGTAT
TTTGGACCTAAAATGAGAAAAGAGGTCAAAGTTTTTGAAGTTGCCGGGCG
TTTTCGGCGCAGCACCCATAAGCAACCTGCTGACTGAATTCCGGAAATTC
CTTAGCAACTCCAGTCCTGAGACGAAAATCGGGGTTGCTTATGTAAAGAA
AATTCGTAAAAATAGGGACGAATGCCTGGGCTATTTCGTGTGCTTTCGTA
TAAAACATTACGTCATGAAAACCATAACATCGAAAAATTGTACGATGCTA
TCTACACTCTGAATAATAATTTGATTTTCAATTTGCAGATGAGTCAGGGA
TTATTCAAGCCGCTGATTGCAGTACATGTACCAAACAAATTATCGTAAGA
TGGTCACGAACACAAGGAGCTACCATCATCCAACAACTCAATGCAGGTGT
TCGTTATCTGGACATGCGTATTGGATATCGAGCTGACGTTGATGATTTTT
TCTTTGTACATGCTCTATACGGGTTCAAAATAAGCAAAATGTTTGAGGAG
ATTCAAACATTTTTAAACGATAACCCAAAGGAAGTTATTATTCTTGATTT
TCAGCAATTTCATACTTTCACAGCTGAAACTCATCAAAAGTTTATAGTAA
TGATTGAAACCTATTTCCCGAATATGTTATATCCATGCAATGGAGCAACT
GAGGTGAATATGTCATTGAATGATTTCTGGCAAAATCAGAAACAGATATT
TGCCAGATATGCTGCTGGTAGTGTCACTGATCAGAATCCACAATTTTGGT
CAAACAAGTTTATCAATACACCTTGGTATAATACAGCAGATATTGATGTG
CTTTTAACTCGCCTGGATGAATTTTTTGATCTTTATGTGAGTGGATCTTT
GAATATACATCAAGCTTTGTTGTCACCTCAAACCTGCACCATTGTTTGCA
AATCATGTTCGAGTTTGGAAAAGGATTTAGCAATTCCCGGAAATTCACAT
ATTAGACAATGGATAAAATATAAAAAACAGGAAAACAAAGAAGTCAATGT
TTTTATTTGTGACTTTATGGTCCAATCAGCTATCATCCCTGAAGTATTGA
AGTTCAACGAATGA Coding sequence (CDS) from alignment at sc0000393_pilon:190997..195060- >XLOC_045645 ID=XLOC_045645|Name=XLOC_045645|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1944bp|location=Sequence derived from alignment at sc0000393_pilon:190997..195060- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTTGTTGCTGTTCAACAGTTTCAAGTCTGGATAACCAGTTTGAATC
AGTTGAAACTGTTGGTAACAGTCGTGCACGATGGATGACTAACCTAGATG
CCAGCTTTACTACTAAACCAATAACTAAGCTAGCGATTCCTGGTAGTCAT
GATTGTGGTGCTTACTTTCTTGATGCAAGTGGACCTGTCTGCCCTGATGG
GTTGTTGCTGTTCAACAGTTTCAAGTCTGGATAACCAGTTTGAATCAGTT
GAAACTGTTGGTAACAGTCGTGCACGATGGATGACTAACCTAGATGCCAG
CTTTACTACTAAACCAATAACTAAGCTAGCGATTCCTGGTAGTCATGATT
GTGGTGCTTACTTTCTTGATGCAAGTGGACCTGTCTGCCCTGATGAGTCA
GGGATTATTCAAGCCGCTGATTGCAGTACATGTACCAAACAAATTATCGT
AAGATGGTCACGAACACAAGGAGCTACCATCATCCAACAACTCAATGCAG
GTGTTCGTTATCTGGACATGCGTATTGGATATCGAGCTGACGTTGATGAT
TTTTTCTTTGTACATGCTCTATACGGGTTCAAAATAAGCAAAATGTTTGA
GGAGATTCAAACATTTTTAAACGATAACCCAAAGGAAGTTATTATTCTTG
ATTTTCAGCAATTTCATACTTTCACAGCTGAAACTCATCAAAAGTTTATA
GTAATGATTGAAACCTATTTCCCGAATATGTTATATCCATGCAATGGAGC
AACTGAGGTGAATATGTCATTGAATGATTTCTGGCAAAATCAGAAACAGA
TATTTGCCAGATATGCTGCTGGTAGTGTCACTGATCAGAATCCACAATTT
TGGTCAAACAAGTTTATCAATACACCTTGGTATAATACAGCAGATATTGA
TGTGCTTTTAACTCGCCTGGATGAATTTTTTGATCTTTATGTGAGTGGAT
CTTTGAATATACATCAAGCTTTGTTGTCACCTCAAACCTGCACCATTGTT
TGCAAATCATGTTCGAGTTTGGAAAAGGATTTAGCAATTCCCGGAAATTC
ACATATTAGACAATGGATAAAATATAAAAAACAGGAAAACAAAGAAGTCA
ATGTTTTTATTTGTGACTTTATGGTCCAATCAGCTATCATCCCTGAAGTA
TTGAAGTTCAACGAATGAATGAGTCAGGGATTATTCAAGCCGCTGATTGC
AGTACATGTACCAAACAAATTATCGTAAGATGGTCACGAACACAAGGAGC
TACCATCATCCAACAACTCAATGCAGGTGTTCGTTATCTGGACATGCGTA
TTGGATATCGAGCTGACGTTGATGATTTTTTCTTTGTACATGCTCTATAC
GGGTTCAAAATAAGCAAAATGTTTGAGGAGATTCAAACATTTTTAAACGA
TAACCCAAAGGAAGTTATTATTCTTGATTTTCAGCAATTTCATACTTTCA
CAGCTGAAACTCATCAAAAGTTTATAGTAATGATTGAAACCTATTTCCCG
AATATGTTATATCCATGCAATGGAGCAACTGAGGTGAATATGTCATTGAA
TGATTTCTGGCAAAATCAGAAACAGATATTTGCCAGATATGCTGCTGGTA
GTGTCACTGATCAGAATCCACAATTTTGGTCAAACAAGTTTATCAATACA
CCTTGGTATAATACAGCAGATATTGATGTGCTTTTAACTCGCCTGGATGA
ATTTTTTGATCTTTATGTGAGTGGATCTTTGAATATACATCAAGCTTTGT
TGTCACCTCAAACCTGCACCATTGTTTGCAAATCATGTTCGAGTTTGGAA
AAGGATTTAGCAATTCCCGGAAATTCACATATTAGACAATGGATAAAATA
TAAAAAACAGGAAAACAAAGAAGTCAATGTTTTTATTTGTGACTTTATGG
TCCAATCAGCTATCATCCCTGAAGTATTGAAGTTCAACGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000393_pilon | genome | sc0000393_pilon:190997..195060 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 199-972:775 |
| Aaloc | 1-195:4065 |
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