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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000193_pilon:157660..160582- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045640 ID=XLOC_045640|Name=XLOC_045640|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2923bp|location=Sequence derived from alignment at sc0000193_pilon:157660..160582- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGATATCTTGGCAATTAGTTTCATTCTTTTGGTTTGAGTTTCACAA
AACTGGTAGGTTGGATGTTCTAAACACACCCCTCTGACAGACCGGGTAGG
ATTTTTTCCATCAATGGGGATGAAAATAACGGACTGAAACTCGATGGGAA
TTGATATTCCAACGCTTTTTATGGCTGAGCATTTCAATTATTTTGTTCTT
TTGTCGAAAATTTAGTGGGGATGGGAAAAATAGCATAATATTTTGCAGTG
AGAATTGGTTTATTTGATTATCATTAGTGGGGACAAAAAATTGAAGGACA
ATTTCCTAGCGGGGACGATATTTTGGCCAATTTTTTCAGTGGGAAGGGTT
CCCAGTGGCTTTGTGAGAAAGGGGTGTTCTCTAAAGAACCAAATACGATA
TTCAAAACTATTTCACATAGGATCTCCAAAAAGATCATGTCGAAAATTTG
AAAATTTTAGCATTTCAGTACATTTTCTGTAAAAATACTTATCTAACCAT
GAGCTCCATTTTCAACCAAGTTATAGCTTTTTGGCATCTAAAATAAATCT
AACATAATTTGAAAACTCGAATGGCGCAAGTAGCTCTTAGGGGGGGGCTT
AGGCAAAATTAAGTACAGGGGACATGCCTGGTAAGGGTCCCTTTTTTAGG
TAATGAAGATATCTGAAAGGGTCCGAAATTAACTATTTTTTAAGAAAAGT
ATACCTGACAGGGTCGACTAATTTTGTTTATATTATTCAGGGTGAAAATT
ATCATAAAGAATTTTAATTTTTTGTCCACTTTTAGTCATTTTATCGATTT
TTTGTGTTGAGAGAATTCCAAATTTACCAAAGATTGCTATCTGATAGGGT
CCCCCTTTCAAACTCCAGAGACACGCCCCCGGGGGGGGGGGGGCAGCTGG
GCAAAAGGACCGACGGGTATGTGCGGGTCCTAAGGGTACCTTTTCCAATA
TGTTTAAAATGCACTGTAAGGGTCGGAAAAACTAGAGATGCACTGTAAGG
GTAGAAATTTCAGAAAATTCTTGAAAAATCTAGATATTTTGACCAAAAAT
GCTAGAATTTTGACCATTTTTTGCACGAAAAGGATCGACAATTTGGGGGA
AAATGCACTTTAAGGGTATGATTTTCACTGATTTTTGCTGCACTGTAAGG
GTGCAATTTTAAAAGCCAATTTTTGGCCCGCACATACCGTCAGTCCGCAA
ACCCAGTGCCCCCCCCCGGGGACACGCCCCGTCGTCCGTTAAGATATTTG
CCCTCTCCCCCAAGGAAGTAGCTGTAGACACATCTGCCTCACAGCTCTGG
TGAAAATCTTTCTTACAGCGGGGATAAAAATCTCGATTGAAATCTCAATG
GGGATAAAAATTCTATTGTTCCAAGGTTAAAAAATCTAGTGGGAATGGTT
TTGGAGTACAATCTCTAATGCTAGTGCAATCTGAAATTCTAGGGTATTTT
TCCCACCGGGGACTGAATTTTTTCCAAATTTTCCATTTGGGATGGGGCCC
CAGAGGGTCTGTGACACATATGGATGTCTTTAGGTACAAGACTACACAAT
TTGCTGATTGTTATCATCCAACATAGTTTGTCATTTTTGCTATTTAATAA
TCTGCATTTCTAATATCTGATTTATTAGAAAAATTGACAAAAATACTTGA
AAAGTGGTGAAAATAAGAGCATCTGAAGGCTTCAAAAAGTCTTTTAAAAA
ATAACGTGTAGTACAGTTTGATATTTTTCTTTCAGCCTGTTTGGAGCCTT
ACAAGCGGTTATCCTGTTGGACGTGTAAAAAAGGTACAGGCGATCAATGT
ACAGAACGGGTTAATACAGTGTGCGAGGGACGTGAAAATGTTTGTGTCAC
TTCTAGAATCACCGAGCAAACAAAGAACTGGAAAGGCGAGATGTTGATCA
AAGAAAGGATCGAAAAGAGATGCCACTTTATTGCTCCCTATCAAGAATGC
GAATGTATCGTAGGTGGTTTGTTGGGAGAAACATGCGAGGTGATGTTTGA
TTTATTTAAAATTTTCTCTTAACAGTGAAAAATTAATTTTGAAAACCTTT
AAAAGTCATGTGATGAAAATCTGTAAGAAAAAAATCATTCAACTTTTAAA
GAAAATCAACAAAATAGTCGAATATTGAATATCAGTCCTACAAAGTCTGT
TTGGTTAGATTTTCCTCAATTAAGCTCCTGTCTCAGTATCCCAATGGGAA
TTTCGTTTCACTCGGTGGGATAAAAATGTTTTATCAAAATTCCAATGGGG
TGAACAATCCATCGTTTCCAGCTCAAAATGCCAGTGGGGATTGTTTCTTA
TGATTCCCAATGTAGAATAAGGCACTTTCCCATTAGTATTTCAGGGGACG
GTGGTCCACCGGATCTGAAACAGGGAATTTAAATATATTACATATACATC
GTGGAATTTCTTAGCTTACGTCATATCTTCCTTCGTTTCGAGCGTAAAGC
TCCTACTCTTCGGGATATGAATACTGCTCCTGTTTTGAATATTGAATTTC
TCCGCATACATCACAAGCACACTGAGGTTTTAATGGAACAATAGAGAGTT
TCGACAAACCTAAGCTGTGTTTTAAATGTTCTTTTATTTGAAATCACTAT
CGATAAACATCTTTTGTAAAAGTTTTCTATTATGTTTACCTATTACTAAT
TCCCGGTGGGGGTCACTGGTGGCTGCCTCCTAGAGACCAAGAGTAAGTCC
TAAAAGCCTGGAGCTGTCTATTGTGTAGACTAGGAATTTCTTTTCGTTTT
AGTTACTGGATTGTTGTGGTCAAGACCTTTGTAACTGGAGGAACAGTAAA
CAAGAAAAAGCAAGACTGTGTTCCTCTTCTTCGTCTATCAACGTAAAACC
ATTTTGTGGACAATTTGTCTATGTGGTTCTTATAGGAATTTTACTGCTGT
TTTCTCAGTTTGTTTTGTATTGA Coding sequence (CDS) from alignment at sc0000193_pilon:157660..160582- >XLOC_045640 ID=XLOC_045640|Name=XLOC_045640|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=960bp|location=Sequence derived from alignment at sc0000193_pilon:157660..160582- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGATATCTTGGCAATTAGTTTCATTCTTTTGGTTTGAGTTTCACAA
AACTGATGAAGATATCTTGGCAATTAGTTTCATTCTTTTGGTTTGAGTTT
CACAAAACTGCCTGTTTGGAGCCTTACAAGCGGTTATCCTGTTGGACGTG
TAAAAAAGGTACAGGCGATCAATGTACAGAACGGGTTAATACAGTGTGCG
AGGGACGTGAAAATGTTTGTGTCACTTCTAGAATCACCGAGCAAACAAAG
AACTGGAAAGGCGAGATGTTGATCAAAGAAAGGATCGAAAAGAGATGCCA
CTTTATTGCTCCCTATCAAGAATGCGAATGTATCGTAGGTGGTTTGTTGG
GAGAAACATGCGAGCCTGTTTGGAGCCTTACAAGCGGTTATCCTGTTGGA
CGTGTAAAAAAGGTACAGGCGATCAATGTACAGAACGGGTTAATACAGTG
TGCGAGGGACGTGAAAATGTTTGTGTCACTTCTAGAATCACCGAGCAAAC
AAAGAACTGGAAAGGCGAGATGTTGATCAAAGAAAGGATCGAAAAGAGAT
GCCACTTTATTGCTCCCTATCAAGAATGCGAATGTATCGTAGGTGGTTTG
TTGGGAGAAACATGCGAGTTACTGGATTGTTGTGGTCAAGACCTTTGTAA
CTGGAGGAACAGTAAACAAGAAAAAGCAAGACTGTGTTCCTCTTCTTCGT
CTATCAACGTAAAACCATTTTGTGGACAATTTGTCTATGTGGTTCTTATA
GGAATTTTACTGCTGTTTTCTCAGTTTGTTTTGTATTGATTACTGGATTG
TTGTGGTCAAGACCTTTGTAACTGGAGGAACAGTAAACAAGAAAAAGCAA
GACTGTGTTCCTCTTCTTCGTCTATCAACGTAAAACCATTTTGTGGACAA
TTTGTCTATGTGGTTCTTATAGGAATTTTACTGCTGTTTTCTCAGTTTGT
TTTGTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000193_pilon | genome | sc0000193_pilon:157660..160582 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 310-480:172 |
| Aaloc | 58-309:1187 |
| Aaloc | 1-54:2924 |
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