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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000187_pilon:36222..40221- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045638 ID=XLOC_045638|Name=XLOC_045638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4000bp|location=Sequence derived from alignment at sc0000187_pilon:36222..40221- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGAAGATGAGTAAAACTTTCAAAATTTAATGACGTCATAAATGATG
ACGTCATCATTTTCAAAAATTTTCTTTTGATTTTTTAAATTTGTATTATC
AATGCCTATCACGTGTCAAAATTTGAAAATGATTGAATAAATAGTTTAGA
AGTTATCAGCACTTTAAAATTTTGAGTTTTAAGCGATTTAAGCTGGGTTT
TATGTCATGTTTCACAATAAAGTCATAAAACCTGATCTGGACAACCTATG
ACCCTAAAATTTTGCACAAGTACTCTTAATAAGATTTTATTAAAAGTCAG
AAAGTTTCAAGTCGTTTGAAAAATTTTTCTCCGAGATATAAACAAAAGAA
CTCCAGCGTGGTAGATTCTACCCCCCCCCTGGGGCTAATAGGGTTAAGAT
ATGAATACAAAATTTTGACCATAGTTTGGAAATGTGATTTAGAGGGTTTT
GGTCATAAATCTGTTTGATAAATTTTTTACAGTATACCCCTCCCCTGGTT
GTTAAACTCAAGTTGGTAAGAACGGAATTTCAAGATTTTTTGCTGTTACT
CATATTTAGAATTTTGGGTTTTATCAATGCTGATCTAGGGCCCACAAAAT
ACTGGTTGACCTTTAAGATGCAATATCTTTTACTCATCTTCTAAAGTCAC
AGATGTATTTGCATTTTCTGAAAGGCATTAGGTGTAGAAAGTTTCCTATA
TCGCATTTTCATAACTTATTTTCAATATCCAAGAAACTAGAGTGAGTTCT
ATACAATTTTTATCTAATTTTGGTATTGTAATATTTCATTCAGACGCAAA
TATGTTATTCTGAATCTGTCTCAAACATCAAAAACATGCTCATTTTTAAG
TATAACCATCATTCTTTCAAAATAAACAAAAATCATCTAATTCTGATAAA
TCTACAGGTCAGATTCCTCATTTTAATGACGACCTACATTTTTGGGGCCG
TCTCCGTTTTGGGGCCATATACTGTATGGTAATGTAGTAAATTTCAGCGA
CCAATAAGGGAGGTGCCTGACTCGAATAACCAGGTATTGGTTATCAAAAA
ATACAATTGAATAAGAAAGAACCTGTTTTAAGGCCTTAAATAGCATAACA
AATACAGTAGTTTAAATTTAGAGGTAATTAAATTTGGTGGGAACTTTTTT
ATCAAATCCGCCAAATTCCGCCAAAATTTCTTCCCTTAAGGTAACATTTT
TTCCCAAAATCAAATCTGATAAGTGGTAAAAATGATCATATCAATTAACC
CTTCGCATCATTTAAGATGCAGTTTGCATCATCAAACATAGAGTTACGAA
AATTACTGCAAGGAAATTAATTTATGTTTTAAATAGGTGAAGATCGAAAC
AAAACATCAATATGGGAAGATTTGTGTTATCAGTTTCTTTGACCATTTTG
TTGGTTAGCATTGTACTTTGCGCAAACAACAACAACAACAACAACAATAA
TAACAATAACAACAATAATAACAGCAACAACAACAACAATCAAAATAATA
ACAATCAAAACAACCAAAACAATTGTCCAGGAACAAACAACCCTTGGGAA
TATTGTAAGTATGTTCTATAGGCTACCCAGGGGGAGGGGGCACTGCAAAT
TTTTTTTCCGTGAACGGACGGAAGTATCTTCGACGGTCAGAAGTATCATC
TTTTGACGGCCCATTTTCCCTTTCCTATCTTTCACCTTATCTGTTTTTTC
TACTTTCTGAGACTTAGTTTCTCATTTCTGACTGAGTTTTCATACCTGTC
AATAATTTGTCCATCAATTTCGACCTGTCTAATTTTCGCACCGAGTGGGA
TTCGAACCACCACCAAAGAAAGACCTTCAGATTCGGAAGCCAGCGCTCTA
TCCATTGAGCCATCGCCGCACAGCAAATGCACGCAACTCATAACATATTA
TACCGAACTGGCAAAAGACGGGGTAATGTTATTATAATATGGGTAAAAGT
ACCCCTTTTTAAACTGACTGAAATTCGAGCCGTTACTAGCAACCCTGCGG
GGCTCAAGGCGCCGAGTATGCACCCGGCACAGTGACAAGCCGTTACTAGC
AACCCTGACCCTACCTAATTGATTGGTAATGACCCAATACCCCCTGAACC
ACGGAATGACGGATAGGAAAAATTAAAAGCGATACTCCCGACCGTCAAAA
GATGATACTTCTGACCGTCCAAGATACTTCCGTCCGTTCACGGAAAAAAA
TTAGCAGGGGCACTAGGATTGGCCGATGAGGAGTATGTCTGGACGGGACC
TCCGGAAACCAACCCTTAGAGAGATTGTTTTCTTCTGAAAAGGTGACCCT
TAGAGGGACTTTGAAAAACTTAGAAAATTTCCTTCCATCTTTGAAAAAAG
TCCTACCCTTAGAGAGACCTTTTTACAACTTTTTCATTTTTTCAAATCAA
AAGAATTTCCTAAAAATTGTGATTTTTCCGATCCTAAGAGTCTTTTGAAA
GGTGAAAAACTGACCCTTACCGCCTGCACATACCCAGCACCCATTTTTGC
CCAAGTACCCCCAACCCCGCTAGTAATTTATTTAGTATTTAAACCTAAAA
GATTTCTTTGACTCTTTCTCCCCAAATATAGCAGCACAGATTAATTTTTA
TATCTTCCACAATCTTCATTCAGGCAATGGAATCCGTTATGACCCTGTCT
CAGAATGGTGCTGTGAAGGAAGATTAAACAACAAACGTGCTTTTTATCGA
TGCTGTGGGTAAGTCAATTTGAATTCCAAAGAAAAATTGCATTTTGCGGG
AATTAATTTTCGCAGTTTTGTCCTTTGTTGAACACATTTTCCACTTTCCT
AGTGAAATTTCAAATCTTTTGATGCAAAATGGCGAAATATGCATTTCACG
GGTCCTAATTTTCGTGGTTTTGCCGAAAAATTACGGAAATAGCAAAAATT
AGTTCCCGCGAAAAAAAGTTCCCTTAAGGATAATAAAAAGGCTATTTTAA
AGAAGGCACAAACAAAGGTAATACTACACCCCTGTCTTACAACCCCAGTG
GGATTTCTTCTCACACCGAGGATAAAAAATTATATCGAAAACCCGATAAG
GATAGCTAATTGTTCTCAGGTAAAAAATCTTGTGAGGAGTGTCTTAAGGT
GCAATTTTTCAAATGAGGATGAAATCAATGTTTATTTCCCAATCGGGTTG
CAACTTTGGGATATTTTTCCCACCGGTGAAATTTTAGCCAATTTTTGCAG
TGGGATGAATGGGACCTACTGCGTCAGTGACACGGAGATGTCTTTGGCTA
TTCTAAAGAAGGCACGAACAAATGTAGTACAAGGTTTTTTTATGAAACAT
CGTAGTTTTCAGATGTTCTTAACTACTCGAGTTTTAAGCCTAAACATGTT
GTTAAAATGTTCTTAATTTCACCTGCTCTTAACTTGCTCTTACCGTAAAT
CACCGATTAAGCGCCCCGCTTGAATTAGCGCCCCGCTCGAATAAGCGCCC
CCCATTTAGTTAAAATAATTTTATAAGCACCTACCTCGAATAAGCGCCCC
AGTTTGAATAAGCGCCCCCCTCCATCCTTTTTTGAAGTTAAGTTTAAGCA
GATTCCGAATTTGTTGATATACGAATTTCTGAAATAAAAAAATAAGCGCC
CCGCTTGAATAAGTGCCCCGCTTGAATAAGCGCCCCCCTCAGAGCCTGAA
AAATTAAATAAGCACCCGGGCGCTTAATCGGTGATTTACGGTAATTCTAT
TTGGGCCGGGGGGGACTAAAAATCCCCCTCTACAACTTGTTTTATAATAG
CTTTTTAACGCTATGGTTATCGAAGTCTCATGTTCTTATATAGTTTGTTT
TAATAAAAAACTTTATTTTTACCAGAACTGCTACGTACGATACACTATCT
CAATCATGTACCAATGGCCGTGTTTCAAATATGTCGTCTAAATGTAATGG
ATGGAACTTCAACCCTCACAATGAATTTTGCCATCAAGGAAAATTATACC
AACTTCGTTATTTCGTACTTTGTAATGGAAATGTTTATCGCAAGTTGTAA
Coding sequence (CDS) from alignment at sc0000187_pilon:36222..40221- >XLOC_045638 ID=XLOC_045638|Name=XLOC_045638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=738bp|location=Sequence derived from alignment at sc0000187_pilon:36222..40221- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGAAGATGAGTAAAACTTTCAAAATATGCTGAAGATGAGTAAAACT
TTCAAAATCAACAACAACAACAATCAAAATAATAACAATCAAAACAACCA
AAACAATTGTCCAGGAACAAACAACCCTTGGGAATATTCAACAACAACAA
CAATCAAAATAATAACAATCAAAACAACCAAAACAATTGTCCAGGAACAA
ACAACCCTTGGGAATATTGCAATGGAATCCGTTATGACCCTGTCTCAGAA
TGGTGCTGTGAAGGAAGATTAAACAACAAACGTGCTTTTTATCGATGCTG
TGGGCAATGGAATCCGTTATGACCCTGTCTCAGAATGGTGCTGTGAAGGA
AGATTAAACAACAAACGTGCTTTTTATCGATGCTGTGGAACTGCTACGTA
CGATACACTATCTCAATCATGTACCAATGGCCGTGTTTCAAATATGTCGT
CTAAATGTAATGGATGGAACTTCAACCCTCACAATGAATTTTGCCATCAA
GGAAAATTATACCAACTTCGTTATTTCGTACTTTGTAATGGAAATGTTTA
TCGCAAGTTGTAAAACTGCTACGTACGATACACTATCTCAATCATGTACC
AATGGCCGTGTTTCAAATATGTCGTCTAAATGTAATGGATGGAACTTCAA
CCCTCACAATGAATTTTGCCATCAAGGAAAATTATACCAACTTCGTTATT
TCGTACTTTGTAATGGAAATGTTTATCGCAAGTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187_pilon | genome | sc0000187_pilon:36222..40221 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 196-369:175 |
| Aaloc | 112-192:1376 |
| Aaloc | 31-108:2526 |
| Aaloc | 1-27:4001 |
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