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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000133_pilon:446867..449422+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045623 ID=XLOC_045623|Name=XLOC_045623|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2556bp|location=Sequence derived from alignment at sc0000133_pilon:446867..449422+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAAACAAGGCATATCAAGATCATTGGTATGAAACGAAAGTTCCGCAAAA
GTTTGAAGACTGGAAAAAATCCCAAGAGGATCAATATCCTCAATTTCGCT
TTTGGTCAACTACGCTGAAACTGGAATTGCTGCTGCTGGAATTTGTTCGA
TCCATAAGGAGTGCAGACTTTACCCTCTATAAGGAGTCCATCAGCAAGCT
GTTACCATGGTTTTTTGCAATGGATCATACCAATTATGCTCGCTGGCTAT
CCATTCATTTATATGATATGTTGAATTTGCCCCAAACCAACCCGATGGTC
AACGAGTATTTTGAAGCTGGTCGATTCGTCATCACGAAAACGAAACGAAA
ATTTTCCTCCATCGGCATCGACCATGCCCACGAACAAAACAACAAATGTG
TCAAAGGAGACGGAGGTATAAAACTAGTTTTTTAAACAGAGCCAGTATCT
TATTGACTTATACTTGCCAACTAGTGAAAGCAGTTTAAGACATCGTCATA
CAATCTTTTAGTTCAAGGAGACTGAAGGAACGGTCGACTaattcaattta
aattttttttccaggagctGTTGGTCTAACAGAAGACTCTCATCAGTTAT
TAAAGTGGATGGTTTCTGGACCTGAATTGGCTCGAATTGTGAACGAGTTT
GAAGAAGGTTTACCCTTTAACAAAGTGAAAGACATCACGGAAAAAACCAA
TCATCATGAGCAAACTGAAGGCATGCAAACACGATTTTCAGACCATGTTT
TGGCACTTATGTCTGGTTTTGAAGATATCGGTAACCCGTTCCTTGAAGAA
TCACCTGATTTGATTGCTCTCGACACCAAAGATGTTGCAGAAGATGAcgc
catcaaaaacatgaacagAGCTGAAGATGTTGGGAAAGAAATGTTCGATT
CATTTGTCAAAAACCACATCAAAGGAAAAGACAAATCCATTTTTGATACA
ATTTCAAAGAATAAGCTATCGATTTTCAACCGGCCCAAGCAACGAAGTAT
CAGCAAAAAAGACGAGTTGACAACGTTAAAGAAAAGTTGCCATCTATTTT
CCCAACTCTACATTGCGTGCCAAGTACGAGACGGTAACTTGGACGAGTTC
TTCATGCATGAAAATACAGCCTTTCCACCATCACTTTCCAAAAATGGCGA
TCTTAGATCTGGAAACAAAGCTGATCTAACTAGTTGTTTGCGTGAGCTTG
TCACTAAAGCAAATGGTCAAAAGGTTGAGGCTGAATGTATCATTTTAGAT
GGCGCAGCAGTTGTAAACATGTTAAAACCAAATAGTTCTTCAACATTCCA
AGAATACGCTAACAGAGAGTTTTCACAGTTTATCAAAAATCAAGTTGCAA
ATCGCATCGACATTGTATGGGACGTCTACATGGAAAATTCACTGAAGTTA
TCCGCCAGAACAAAACGAGGTAGGGATTTTCCTTTTCATCTACTATTTCT
ATTCTTCTCCAAGGATAAATTCAGGCATGAACTAAAGATCTTCTGTCTTT
TGAAGAAAATGGTAcaatgatatagataaaagatcttatgttatctttat
ttttattttaggcaAAGGGACCCGCAGAAAGGTGCTGGAACAAACAAGAA
TACCGGGAAATTGGCAATCATTTCTACGCGTGGATAAAAACAAGCAAGAA
CTCTTCAGCTTTTTGGCAAATGAATCCATCAAAATGAATACCAAGAAAAC
AATAGTCAGCACTATCAATGACTTAGCAATTTCTAATCACCATGACTGCA
CCTTCTTGTCACCGTGTAACCACGAGGAAGCTGACACTAGGATGTTCCTC
CACGCAAAGGACGCAAGCAATTCTGGAATGCAAAAGATATGTATACGGAC
CGTTGATACTGACGTTGTTGCAATCGCTGTTGGCGTCTTTTCACAGCTTG
GTATCACAGAATTATGGATTTCATTCGGTGTTGGgaaaaatcatcatctt
atcCCAATCCATTCTATCTGTCAGAGTCTTGGTAATGCTAAAAGTAGATG
TCTACCACTCTTTCACGCTTTAACTGGCTGCGACCAAGTCTCATTCTTCA
GTGGAAGAGGAAAGAAAAATGCTTGGAATACTTGGGAGAAATTTAGTGAT
CTCACAACCGGTCTTCTCACAATAATTGAAAATCCATCAATCGAAACCTT
AGAATCTTCATTTCCAACCATTCAGAGGTTTGTTGTGTTGCTTTATGATC
GCACAAGCACCGACACCGAAGTTAACCAGCTGAGAAAACATCTATTTGCT
ACTAAAGGTCGATCATTAGAAGGTATTCCGCCCACAGCAGATGCCTTATA
TCAGCATTTTAAGCGTACTGTTTTTCAAGGAGGTTTTAATTGGTGTCAAG
TTGTTATAGCCATTCAAAATCTACCAAAACCTGAAGACTGGGGTTGGAAA
GAGTATCaaaaaaaaTACGAGATCAAATGGACAACCTTACCtgaagcttc
aaaaatttgtcaAGAACTAATAAAATGTGGGTGCAACAAAGAGAAAGGGT
GCAAAGGTAGATGCAAGTGTAAAAAGGCATCCTTAAAATGCACGGAACTT
TGCAAA Coding sequence (CDS) from alignment at sc0000133_pilon:446867..449422+ >XLOC_045623 ID=XLOC_045623|Name=XLOC_045623|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4530bp|location=Sequence derived from alignment at sc0000133_pilon:446867..449422+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAAACAAGGCATATCAAGATCATTGGTATGAAACGAAAGTTCCGCAAAA
GTTTGAAGACTGGAAAAAATCCCAAGAGGATCAATATCCTCAATTTCGCT
TTTGGTCAACTACGCTGAAACTGGAATTGCTGCTGCTGGAATTTGTTCGA
TCCATAAGGAGTGCAGACTTTACCCTCTATAAGGAGTCCATCAGCAAGCT
GTTACCATGGTTTTTTGCAATGGATCATACCAATTATGCTCGCTGGCTAT
CCATTCATTTATATGATATGTTGAATTTGCCCCAAACCAACCCGATGGTC
AACGAGTATTTTGAAGCTGGTCGATTCGTCATCACGAAAACGAAACGAAA
ATTTTCCTCCATCGGCATCGACCATGCCCACGAACAAAACAACAAATGTG
TCAAAGGAGACGGAGTTAAACAAGGCATATCAAGATCATTGGTATGAAAC
GAAAGTTCCGCAAAAGTTTGAAGACTGGAAAAAATCCCAAGAGGATCAAT
ATCCTCAATTTCGCTTTTGGTCAACTACGCTGAAACTGGAATTGCTGCTG
CTGGAATTTGTTCGATCCATAAGGAGTGCAGACTTTACCCTCTATAAGGA
GTCCATCAGCAAGCTGTTACCATGGTTTTTTGCAATGGATCATACCAATT
ATGCTCGCTGGCTATCCATTCATTTATATGATATGTTGAATTTGCCCCAA
ACCAACCCGATGGTCAACGAGTATTTTGAAGCTGGTCGATTCGTCATCAC
GAAAACGAAACGAAAATTTTCCTCCATCGGCATCGACCATGCCCACGAAC
AAAACAACAAATGTGTCAAAGGAGACGGAGgagctGTTGGTCTAACAGAA
GACTCTCATCAGTTATTAAAGTGGATGGTTTCTGGACCTGAATTGGCTCG
AATTGTGAACGAGTTTGAAGAAGGTTTACCCTTTAACAAAGTGAAAGACA
TCACGGAAAAAACCAATCATCATGAGCAAACTGAAGGCATGCAAACACGA
TTTTCAGACCATGTTTTGGCACTTATGTCTGGTTTTGAAGATATCGGTAA
CCCGTTCCTTGAAGAATCACCTGATTTGATTGCTCTCGACACCAAAGATG
TTGCAGAAGATGAcgccatcaaaaacatgaacagAGCTGAAGATGTTGGG
AAAGAAATGTTCGATTCATTTGTCAAAAACCACATCAAAGGAAAAGACAA
ATCCATTTTTGATACAATTTCAAAGAATAAGCTATCGATTTTCAACCGGC
CCAAGCAACGAAGTATCAGCAAAAAAGACGAGTTGACAACGTTAAAGAAA
AGTTGCCATCTATTTTCCCAACTCTACATTGCGTGCCAAGTACGAGACGG
TAACTTGGACGAGTTCTTCATGCATGAAAATACAGCCTTTCCACCATCAC
TTTCCAAAAATGGCGATCTTAGATCTGGAAACAAAGCTGATCTAACTAGT
TGTTTGCGTGAGCTTGTCACTAAAGCAAATGGTCAAAAGGTTGAGGCTGA
ATGTATCATTTTAGATGGCGCAGCAGTTGTAAACATGTTAAAACCAAATA
GTTCTTCAACATTCCAAGAATACGCTAACAGAGAGTTTTCACAGTTTATC
AAAAATCAAGTTGCAAATCGCATCGACATTGTATGGGACGTCTACATGGA
AAATTCACTGAAGTTATCCGCCAGAACAAAACGAGgagctGTTGGTCTAA
CAGAAGACTCTCATCAGTTATTAAAGTGGATGGTTTCTGGACCTGAATTG
GCTCGAATTGTGAACGAGTTTGAAGAAGGTTTACCCTTTAACAAAGTGAA
AGACATCACGGAAAAAACCAATCATCATGAGCAAACTGAAGGCATGCAAA
CACGATTTTCAGACCATGTTTTGGCACTTATGTCTGGTTTTGAAGATATC
GGTAACCCGTTCCTTGAAGAATCACCTGATTTGATTGCTCTCGACACCAA
AGATGTTGCAGAAGATGAcgccatcaaaaacatgaacagAGCTGAAGATG
TTGGGAAAGAAATGTTCGATTCATTTGTCAAAAACCACATCAAAGGAAAA
GACAAATCCATTTTTGATACAATTTCAAAGAATAAGCTATCGATTTTCAA
CCGGCCCAAGCAACGAAGTATCAGCAAAAAAGACGAGTTGACAACGTTAA
AGAAAAGTTGCCATCTATTTTCCCAACTCTACATTGCGTGCCAAGTACGA
GACGGTAACTTGGACGAGTTCTTCATGCATGAAAATACAGCCTTTCCACC
ATCACTTTCCAAAAATGGCGATCTTAGATCTGGAAACAAAGCTGATCTAA
CTAGTTGTTTGCGTGAGCTTGTCACTAAAGCAAATGGTCAAAAGGTTGAG
GCTGAATGTATCATTTTAGATGGCGCAGCAGTTGTAAACATGTTAAAACC
AAATAGTTCTTCAACATTCCAAGAATACGCTAACAGAGAGTTTTCACAGT
TTATCAAAAATCAAGTTGCAAATCGCATCGACATTGTATGGGACGTCTAC
ATGGAAAATTCACTGAAGTTATCCGCCAGAACAAAACGAGgcaAAGGGAC
CCGCAGAAAGGTGCTGGAACAAACAAGAATACCGGGAAATTGGCAATCAT
TTCTACGCGTGGATAAAAACAAGCAAGAACTCTTCAGCTTTTTGGCAAAT
GAATCCATCAAAATGAATACCAAGAAAACAATAGTCAGCACTATCAATGA
CTTAGCAATTTCTAATCACCATGACTGCACCTTCTTGTCACCGTGTAACC
ACGAGGAAGCTGACACTAGGATGTTCCTCCACGCAAAGGACGCAAGCAAT
TCTGGAATGCAAAAGATATGTATACGGACCGTTGATACTGACGTTGTTGC
AATCGCTGTTGGCGTCTTTTCACAGCTTGGTATCACAGAATTATGGATTT
CATTCGGTGTTGGgaaaaatcatcatcttatcCCAATCCATTCTATCTGT
CAGAGTCTTGGTAATGCTAAAAGTAGATGTCTACCACTCTTTCACGCTTT
AACTGGCTGCGACCAAGTCTCATTCTTCAGTGGAAGAGGAAAGAAAAATG
CTTGGAATACTTGGGAGAAATTTAGTGATCTCACAACCGGTCTTCTCACA
ATAATTGAAAATCCATCAATCGAAACCTTAGAATCTTCATTTCCAACCAT
TCAGAGGTTTGTTGTGTTGCTTTATGATCGCACAAGCACCGACACCGAAG
TTAACCAGCTGAGAAAACATCTATTTGCTACTAAAGGTCGATCATTAGAA
GGTATTCCGCCCACAGCAGATGCCTTATATCAGCATTTTAAGCGTACTGT
TTTTCAAGGAGGTTTTAATTGGTGTCAAGTTGTTATAGCCATTCAAAATC
TACCAAAACCTGAAGACTGGGGTTGGAAAGAGTATCaaaaaaaaTACGAG
ATCAAATGGACAACCTTACCtgaagcttcaaaaatttgtcaAGAACTAAT
AAAATGTGGGTGCAACAAAGAGAAAGGGTGCAAAGGTAGATGCAAGTGTA
AAAAGGCATCCTTAAAATGCACGGAACTTTGCAAAgcaAAGGGACCCGCA
GAAAGGTGCTGGAACAAACAAGAATACCGGGAAATTGGCAATCATTTCTA
CGCGTGGATAAAAACAAGCAAGAACTCTTCAGCTTTTTGGCAAATGAATC
CATCAAAATGAATACCAAGAAAACAATAGTCAGCACTATCAATGACTTAG
CAATTTCTAATCACCATGACTGCACCTTCTTGTCACCGTGTAACCACGAG
GAAGCTGACACTAGGATGTTCCTCCACGCAAAGGACGCAAGCAATTCTGG
AATGCAAAAGATATGTATACGGACCGTTGATACTGACGTTGTTGCAATCG
CTGTTGGCGTCTTTTCACAGCTTGGTATCACAGAATTATGGATTTCATTC
GGTGTTGGgaaaaatcatcatcttatcCCAATCCATTCTATCTGTCAGAG
TCTTGGTAATGCTAAAAGTAGATGTCTACCACTCTTTCACGCTTTAACTG
GCTGCGACCAAGTCTCATTCTTCAGTGGAAGAGGAAAGAAAAATGCTTGG
AATACTTGGGAGAAATTTAGTGATCTCACAACCGGTCTTCTCACAATAAT
TGAAAATCCATCAATCGAAACCTTAGAATCTTCATTTCCAACCATTCAGA
GGTTTGTTGTGTTGCTTTATGATCGCACAAGCACCGACACCGAAGTTAAC
CAGCTGAGAAAACATCTATTTGCTACTAAAGGTCGATCATTAGAAGGTAT
TCCGCCCACAGCAGATGCCTTATATCAGCATTTTAAGCGTACTGTTTTTC
AAGGAGGTTTTAATTGGTGTCAAGTTGTTATAGCCATTCAAAATCTACCA
AAACCTGAAGACTGGGGTTGGAAAGAGTATCaaaaaaaaTACGAGATCAA
ATGGACAACCTTACCtgaagcttcaaaaatttgtcaAGAACTAATAAAAT
GTGGGTGCAACAAAGAGAAAGGGTGCAAAGGTAGATGCAAGTGTAAAAAG
GCATCCTTAAAATGCACGGAACTTTGCAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133_pilon | genome | sc0000133_pilon:446867..449422 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1276-2268:1564 |
| Aaloc | 1201-1272:1347 |
| Aaloc | 1159-1194:1311 |
| Aaloc | 418-1158:567 |
| Aaloc | 1-414:1 |
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