|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000388_pilon:159207..161425+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045620 ID=XLOC_045620|Name=XLOC_045620|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2219bp|location=Sequence derived from alignment at sc0000388_pilon:159207..161425+ (Clytia hemisphaerica_ch_hm2_pilon)
CAttacaattttacaaaaaaagacaCAATGAATGAATCAAGAAGCACCAC
ACCACACCGACATCATCAACCACTCAACATTTCTCTTCATACAAGATGCT
GCATTGAACAAACTCTTGCTCCTTTACAAAACATGAACACGAAAAGTCTT
GAAACGATGAACAAATTGTTGGCTCCCTGTCTACCTGATAGTGAAAACAG
AGTCTTAAGTAGCCATGGGAACAAGACAAATATGCTTAAAGATAACCTAT
TCGGGTCTATCATTTTAACCTTGGTGCCATCAAGTGAGATTTCTACTAAC
CATGAAAATACAGACCACTGTCAAAAATATTTGTGTGAAACCCCGATCAA
TCAAAACATGTATCCTTACATAACATTActaatagcaacacttctcatCG
CAACCATTGgcaatatttttgtttgtaGCATCATCACCAAGATTCGATCA
TTACGTCAACATCCGACATACAAACTCTTAAAATCCTTAGCTGTTAGTGA
TCTGCTGGTATCGCTACTCGTCTTACCGATCAAAATATCCATGGCTTTAA
CCAACAATCATTTCTGCAGCTCAATCAACATATGTCGACTATATCAGACT
GTTGAccatgtattttttactgcttcGATCACCCATCTGTTTGTTATTGC
TATAGATCGGTATCTGACAATCAGTCGACCTTTTAACTACCGGTTTGCAG
AAAAACATTACAGGTATCacattttatcaaattatatttttgtatcGCTT
GAACAGCAGGCCTGTTTTCGGATCAAATATATATCAACAGTATTGCAGGA
AACCCATCTGTATACACACGCACTATGAAAGGGGAGGCTAACAgtcattg
attttttctttgacATGTCTTGTAACTTGATTGCGAAGAAAAGAAATTAA
CGAAGCCAGTCCTGATATTTTTAGATGTTACTAATTCGATTACTTACAAG
CTTTTAAGCTCTTTTACATGTATTGACACTATAAGTTTCCTCGAGTCGAA
TCTTTCAAAACAAGTCCGAGTGAAGAAAACGAGCTAAGTAAATTTCATAC
TCGAAGTTTTATGCCACATAGGATGGCATCTTTCAGTGAAATAAACGTTT
CACTCAAAAATGTCATATATAAGATTCTCAATTAAGACATCTACTCGATG
TCAGCATATTAACCCCAATTGATGTTGTTTTGTTCTCTAGTTTCCCCAGT
GCGTTTTGTGTCTTTTAAAGGTACCAAGTCAAATATTTCGCCTTTGGCAT
ACAACTTTTACCACTTTTACCACTTTTACCAGTTAAAGAAGATTGAGTTA
TTAAAGTTCGAGCTTCCAGCGGTCTGTGTGATGGtgtgattggccctttt
tttatTGTAGTAGTGGTGTGTTCTATGATTTCAAAAGAGTGATGGTACAT
GTGATCACTCATCACTGTGATGGtgtcaaaagatttttctttgtataatg
ACGCGATTAGAATTTAGTTTTGCTCCGCTAGGAGGGGCCTCTATGAAGAC
TCTGGTgcatcaaattttctttaaatttcagGATGATGATTTGTGTGGTA
TGGATATATGCAGCTCTCTGGGGAGTTCTCAGCAATGTTGATTTTGAAAC
CTATCAATTCCAATCAACCTTCCATATCGATCATGGAAAATGCCAGCGGA
AAGACATCATTTTCCCACGTGTTTTATTCATCGCAGTTTTCTTTTTGCCT
TGTTTAGTCATGTTTTATATGCATGCTTGTGTATGGAAAATCGCTGTTGa
tcaaggaaaaaaaatcgagaaagaAAACACACCGACACTTCAATTCAAAA
GACTGACAGGCGTAGAGAATAGTGAAAAAAGCTCTAAACAACTGTTACCA
AAATATCTCAAGCAGTTTTCAAATTCTTCATCAGGAAAATTCAAAGTTGA
GTTTCGCGCTACAAAGATTATTCTCTCCGTATTCGGCACCTATCTTATCT
GCTGGGCACCTGTCACCATTATGACTTTCATGCGGACTTTCAGAACGTTC
AACATCGACAAGAATGCGTATTTGTTTCTGTGTAGCTTTCTACCAAATCT
GAACAGTTGTCTAAATCCGTTTCTGTATTGTTTACTTCATCGAGACTTTA
TAAACGCGTTGAAAACAGTCTATAGGCGCCTAAAGTTTGTTAGTAAACAT
GAGATGTCGATCAAACATAGAGCTAACACTGGTGAAATTATACGGACCAG
AAAAGCAAACACTAGGTGA Coding sequence (CDS) from alignment at sc0000388_pilon:159207..161425+ >XLOC_045620 ID=XLOC_045620|Name=XLOC_045620|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2802bp|location=Sequence derived from alignment at sc0000388_pilon:159207..161425+ (Clytia hemisphaerica_ch_hm2_pilon)
CAttacaattttacaaaaaaagacaCAATGAATGAATCAAGAAGCACCAC
ACCACACCGACATCATCAACCACTCAACATTTCTCTTCATACAAGATGCT
GCATTGAACAAACTCTTGCTCCTTTACAAAACATGAACACGAAAAGTCTT
GAAACGATGAACAAATTGTTGGCTCCCTGTCTACCTGATAGTGAAAACAG
AGTCTTAAGTAGCCATGGGAACAAGACAAATATGCTTAAAGATAACCTAT
TCGGGTCTATCATTTTAACCTTGGTGCCATCAAGTGAGATTTCTACTAAC
CATGAAAATACAGACCACTGTCAAAAATATTTGTGTGAAACCCCGATCAA
TCAAAACATGTATCCTTACATAACATTActaatagcaacacttctcatCG
CAACCATTGgcaatatttttgtttgtaGCATCATCACCAAGATTCGATCA
TTACGTCAACATCCGACATACAAACTCTTAAAATCCTTAGCTGTTAGTGA
TCTGCTGGTATCGCTACTCGTCTTACCGATCAAAATATCCATGGCTTTAA
CCAACAATCATTTCTGCAGCTCAATCAACATATGTCGACTATATCAGACT
GTTGAccatgtattttttactgcttcGATCACCCATCTGTTTGTTATTGC
TATAGATCGGTATCTGACAATCAGTCGACCTTTTAACTACCGGTTTGCAG
AAAAACATTACAGCAttacaattttacaaaaaaagacaCAATGAATGAAT
CAAGAAGCACCACACCACACCGACATCATCAACCACTCAACATTTCTCTT
CATACAAGATGCTGCATTGAACAAACTCTTGCTCCTTTACAAAACATGAA
CACGAAAAGTCTTGAAACGATGAACAAATTGTTGGCTCCCTGTCTACCTG
ATAGTGAAAACAGAGTCTTAAGTAGCCATGGGAACAAGACAAATATGCTT
AAAGATAACCTATTCGGGTCTATCATTTTAACCTTGGTGCCATCAAGTGA
GATTTCTACTAACCATGAAAATACAGACCACTGTCAAAAATATTTGTGTG
AAACCCCGATCAATCAAAACATGTATCCTTACATAACATTActaatagca
acacttctcatCGCAACCATTGgcaatatttttgtttgtaGCATCATCAC
CAAGATTCGATCATTACGTCAACATCCGACATACAAACTCTTAAAATCCT
TAGCTGTTAGTGATCTGCTGGTATCGCTACTCGTCTTACCGATCAAAATA
TCCATGGCTTTAACCAACAATCATTTCTGCAGCTCAATCAACATATGTCG
ACTATATCAGACTGTTGAccatgtattttttactgcttcGATCACCCATC
TGTTTGTTATTGCTATAGATCGGTATCTGACAATCAGTCGACCTTTTAAC
TACCGGTTTGCAGAAAAACATTACAGGATGATGATTTGTGTGGTATGGAT
ATATGCAGCTCTCTGGGGAGTTCTCAGCAATGTTGATTTTGAAACCTATC
AATTCCAATCAACCTTCCATATCGATCATGGAAAATGCCAGCGGAAAGAC
ATCATTTTCCCACGTGTTTTATTCATCGCAGTTTTCTTTTTGCCTTGTTT
AGTCATGTTTTATATGCATGCTTGTGTATGGAAAATCGCTGTTGatcaag
gaaaaaaaatcgagaaagaAAACACACCGACACTTCAATTCAAAAGACTG
ACAGGCGTAGAGAATAGTGAAAAAAGCTCTAAACAACTGTTACCAAAATA
TCTCAAGCAGTTTTCAAATTCTTCATCAGGAAAATTCAAAGTTGAGTTTC
GCGCTACAAAGATTATTCTCTCCGTATTCGGCACCTATCTTATCTGCTGG
GCACCTGTCACCATTATGACTTTCATGCGGACTTTCAGAACGTTCAACAT
CGACAAGAATGCGTATTTGTTTCTGTGTAGCTTTCTACCAAATCTGAACA
GTTGTCTAAATCCGTTTCTGTATTGTTTACTTCATCGAGACTTTATAAAC
GCGTTGAAAACAGTCTATAGGCGCCTAAAGTTTGTTAGTAAACATGAGAT
GTCGATCAAACATAGAGCTAACACTGGTGAAATTATACGGACCAGAAAAG
CAAACACTAGGTGAGATGATGATTTGTGTGGTATGGATATATGCAGCTCT
CTGGGGAGTTCTCAGCAATGTTGATTTTGAAACCTATCAATTCCAATCAA
CCTTCCATATCGATCATGGAAAATGCCAGCGGAAAGACATCATTTTCCCA
CGTGTTTTATTCATCGCAGTTTTCTTTTTGCCTTGTTTAGTCATGTTTTA
TATGCATGCTTGTGTATGGAAAATCGCTGTTGatcaaggaaaaaaaatcg
agaaagaAAACACACCGACACTTCAATTCAAAAGACTGACAGGCGTAGAG
AATAGTGAAAAAAGCTCTAAACAACTGTTACCAAAATATCTCAAGCAGTT
TTCAAATTCTTCATCAGGAAAATTCAAAGTTGAGTTTCGCGCTACAAAGA
TTATTCTCTCCGTATTCGGCACCTATCTTATCTGCTGGGCACCTGTCACC
ATTATGACTTTCATGCGGACTTTCAGAACGTTCAACATCGACAAGAATGC
GTATTTGTTTCTGTGTAGCTTTCTACCAAATCTGAACAGTTGTCTAAATC
CGTTTCTGTATTGTTTACTTCATCGAGACTTTATAAACGCGTTGAAAACA
GTCTATAGGCGCCTAAAGTTTGTTAGTAAACATGAGATGTCGATCAAACA
TAGAGCTAACACTGGTGAAATTATACGGACCAGAAAAGCAAACACTAGGT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000388_pilon | genome | sc0000388_pilon:159207..161425 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 715-1401:1533 |
| Aaloc | 1-711:1 |
|
