|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000388_pilon:167316..171726- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045614 ID=XLOC_045614|Name=XLOC_045614|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4411bp|location=Sequence derived from alignment at sc0000388_pilon:167316..171726- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAATGCTTTTCTCGAAGAATAAACTAGTCATGAAGAGTAACAGCAA
AGACAATTTATCAGATATTTATATCGTTCCACCCTCATTGAAGATGGAGT
TGGAGGTAGGTTCAGTTTGCGCTTACCTTCTTTTGACGTTTATCACGTTA
AATGTACGTTCACTTAGCTCTAGTTTAGACGGCCCACTTTTTGCCCTGCC
TATTCTAATTGTGAATTAAAGAGGGCATAAAGTGGGCCGTCTAAAGTGAT
GCATAGTCCTCTTTTGACGTCAATGCAATGTCTTCTTTCAAACCTTTCCA
AGCAAAGATTTTAACAGCCAACTTTGTGCCCTCTTTCTGCCTACTCTAAC
AATTAGAATAGGCAGGGCAGAAAGTCGGCCGTCTAAACTAGAGCTTAACG
TTGATAAGACGTTAAATATAGTTAAAACCATTTTTCATCATATCCCTGTT
GCAGTCCTCTTGTGTATACTACATCCCCTTCTCACAGACCCACTGGGAAC
CATTCCCATTGGAAAAATTGTCCAAAATATCGTCCCCAGTGGAAAATTAT
CCTCTAATTTTTGTTCCCACTGAAAATAATCAAATAAACCAATCCACACT
TCTAAATATTATGCTATTTTTCCCATCCACACTGAATTATCTGACTTAGC
CATAAAAGAAAATGAAATATCAACCCCCATTGAGTTTCAGTCCGTTATTT
TTATCCTCACTGGCTGAAAAAAATCCTACTGGGCATTTGAGAAGGGGTGT
ACTGTAAGGGCCTGATCCTGTTTCAAAATGGGAATACTCTGATTACTCTT
CCTCTTGAAAGAAAGTTTGATCGTATTCCTGAACAACAAACATCGATTCC
ATATTTTTCTACCACAATTAACTTGATTGCAATACAGTTGATGCTCTCTA
ATTCGATCTTCAAGGAGAATTGGGTTTTCATCGAATAAGGGAGCGTCGTT
TATGAGAGTTTTTTTGTTGATGGGGACTTTAAATTTCATCGAATAAGGGA
GTCTATCGAAAAGTAGAACGTCGAATTAGAGAGTGTCAACTGTTGTTTCG
GAACTGACAGGCTGAAGGTCTACAACCGGTTTATTTTCTTTTCCACTTTT
TACTTTCTAGCTAATTAATTTCACAGATGCAGAAATCTCAGGTAACATTC
ACTATAATTTAGAGCAAGCATAAATCACCGACAACACCAACAGTAAAAAC
CTGCACATATTGTTTCACAGCAAAATCCAAAGCTTTTGAAATCTTCGGGT
TTCTTAACTTTATAAGGCTAAGAATGTTATTAAATATTTCTAATTTTTTG
AGTATATTATGCAATTTTGGTGTTTGATATTCCGTAAATCCTTAGATGTT
CTTAACTTGTTCTCAATATTTGGGCTATTGAATCCTTGTGTTCTTATATA
GATCGTTGTTATAGGAAAAACGTATACATGTTGCTAGTGTTAAACTTTCC
TATCTATCAAACAGAGGTGAAAGAAGCATTCGGTTTATACGACAAACAAC
GCAATGGATACATCTCGCGAAAATCTTTCCTAACCGTGATGAGATCTTTG
GGGCAAAATCCCACTGAAGATGAATATGATGATATGTTAAATGAAGTGGA
CGCAGACCGTAAGTGTGGCCTCACTCACTAAGAGATATATTCAAGGTTCT
GCTACTAGTTTCATCTTAGTAAGTGAGGAGTTCGTTGCATACATCCATCA
ACTTTTCATTTATCATAGAATCCAATGAAGTCTTATTCAAAGATTATTTT
TTTGATTTAAAAGTATGTATTGCTGAAGCAGTTAATATCAGCCCTTTATT
CTTTTTTATTTTCTCACCATAGGAAATGGTTTGATAGAATTTTCTGAATT
CCTTTACTTGGTTGCACGACATACAACAAATTTTGAAGAGACGGCAAAAT
ATTTATTTCACGTGTTTGACCACAGAGGGACTGGATATTTGAACAAAACA
CAACTTTGTGACGTCATGTCACTTGATCGTGGCCTCACATCGAACGATAT
TGAAGATCTCTTATCTTTTTTCAATTCCGATAGAAACAATAATGTTGATA
TTGACGGTGAGTTAGAACAATGACCACACCCCTGTCTCACAGAACTAGTT
GCACTGACCACGCCCCTGTCTTCCAGAACTAGCTGCACTGACCACGCCCC
TATTTCACAAAACAAGTTGCACTGACCACGTCCCTATTTAACAAAACTAG
TTGCACTGACCACGCCCCTGTCTCACAGAACTAGTTGCACTGACCACGCC
CCTATTTCACAGAACTAGTTGCATTAGCCACGCCCCTGTCTCAGAGAACT
AGTTGCACTGACCACGCCCCTGTCTCACAGAACTAGTTGCACTGGCCACG
CCCCTTTCTCACAGAACTAGTTGCACTGACCACGCCCCTGTCTCACAGAA
CTAGTTGCACTGACCACGCCCCTGTCTCACAGAACTAGTTGCACTGACCA
CGCCCCTATTTCACAGAACTAGTTGCACTGACCACGCCCCTGTCTCACAG
AACTAGTTGCACTGACCACGCCCCTGTCTCCCAGAACTAGTTGCACTGGC
CACGCCCCTTTCTCACAGAACTAGTTGCACTGACCACGCCCCTGTCTCAC
AGAACTAGTTGCATTGACCACGCCCCTGTCTCACAGAACTAGTTGCACTG
ACCACGCCCCTATTTCACAGAACTAGTTGCACTGACCACGCCCCTATTTC
ACAGAACTAGTTGCACTAGCCACGCCCCTGTCTCACAGAACTAGTTGCAC
TGCACTGACCACGCCCCTGTCTCACAGAACTAGTTGCACTGACCACGCCC
CTGTCTCCCAGAACTAATTGCACTGACCACGCCCCTGTCTCACAGAACTA
GTTGCATTGACCACGCCCCTGTCTCACAGAACTAGTTGCACTGACCACGC
CCCTATTTCACAGAACTAGTTGCACTGACCACGCCCCAATTTCACAGAAC
TAGTTGCACTAGCCACGCCCCTGTCTCACAGAACTAGTTGCACTGACCAC
GCCCCTGTCTCACAGAACTAGTTGCACTGACCACGCCCTTGTCTCACAGA
ACTAGTTGTACTTGCCACGCCCCTGTCTCCCAGAACTAGTTGTACTGACT
GGTTATACCTCTATATCTCGAAAAAAAATCTGAGGATTTTAACTAAATCT
CTACTATCTCATTGAAAGCTAATTGCAAGGGGCTTGGTTCCACCAAATTG
AATAAAACAATGACACATCTTACAAACAGAGCCACACCCTTCATTTACAG
GAACAAGTGCACTAACTACACCCTGTATGACTAATTTCACTAACCGCATC
TATTTTCGCAGAACTATTTTCGTTACCCACACCCCTGTCTCGTTGTCCCA
TAGAACTAACTGTACTAACCACACCCCAGTATCAGAGAACCAAGAATGAT
AATAACAACACCCTTGTCTCACAAAACTGATTTCAATGACCACGCCACTT
CCTCACAAAACTAATTGTACTGACCATACCATAGTTTGCTGACACTGGCA
TCAGCTTAGTCTAAATTGATTGGTGTATTCCAAGTTTTTGTTAGGCTTGG
CCTTAATCTTGTCATTCAATTAATTTACCATTCCCTCGTCTCTTGAAAAA
AAGTGTTCAAAGTCATTTTCGTAACAAACTGTTAAAGAAAAACTCATAAA
AAGTTATAATTTTGGCACCCTTTAGAGACTGTTCATCTAACGTTTCCAAA
CAATCTAAAAAGAACGAAAAATAACTATTAAAAGCGATAAAAAGAACAAC
AAACCCTAACCCTAACTATCAAAGAACGACATATTTCGCCGTCCACAACC
CCAACCGCAAGGGACTGTACCACCCTTACAGATTCATTCCTCCTTGTTTG
TCACGGGAATTAACTACGTGTGGTTTGAAAGAACGCAAAATTACCAATGT
GTATAAGTCTCTATTTGGGTGAGCTGGAAACATTAGATGAACTTAAATCT
TTCTGTCTTTAGAATTCGTCCGTGTATTGAAGTACCTTCCGACGTCGTAC
GACGAAGAAGATCAGCAAAATAGCGCCACGTCACCCACACAACAGACTTC
AAAAAAAGGAGGAAAACTCCCAAACAAAACATTACATCCAAATACATCAG
AACAAAAAACAGAATCCATGCAAAATACCAAAAATCTTAAAAACAGTAAT
AGTAACAATACAAGCAAACAAATAAATAATACGTCACCGAAAAAAACAAA
AACACAGACCAGCCAATCATCGTCGAAAAACGAAAGTGATAAAAAACAGA
CCCGCGATAACAACAACACCAAATCTACAAAAACACAAAAAGTATCCAAT
AAGAATGGTAGTGTAAGCAAACCTTCAGAGAAACATGGTGCAAAGAAGGC
CTTAAATACCAAAATAGCTGTTCACGAGAATGGTAAGACTACAGTCGGAA
TTGAAGTTTGA Coding sequence (CDS) from alignment at sc0000388_pilon:167316..171726- >XLOC_045614 ID=XLOC_045614|Name=XLOC_045614|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1926bp|location=Sequence derived from alignment at sc0000388_pilon:167316..171726- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAATGCTTTTCTCGAAGAATAAACTAGTCATGAAGAGTAACAGCAA
AGACAATTTATCAGATATTTATATCGTTCCACCCTCATTGAAGATGGAGT
TGGAGATGGGAATGCTTTTCTCGAAGAATAAACTAGTCATGAAGAGTAAC
AGCAAAGACAATTTATCAGATATTTATATCGTTCCACCCTCATTGAAGAT
GGAGTTGGAGCTAATTAATTTCACAGATGCAGAAATCTCAGCTAATTAAT
TTCACAGATGCAGAAATCTCAGAGGTGAAAGAAGCATTCGGTTTATACGA
CAAACAACGCAATGGATACATCTCGCGAAAATCTTTCCTAACCGTGATGA
GATCTTTGGGGCAAAATCCCACTGAAGATGAATATGATGATATGTTAAAT
GAAGTGGACGCAGACCAGGTGAAAGAAGCATTCGGTTTATACGACAAACA
ACGCAATGGATACATCTCGCGAAAATCTTTCCTAACCGTGATGAGATCTT
TGGGGCAAAATCCCACTGAAGATGAATATGATGATATGTTAAATGAAGTG
GACGCAGACCGAAATGGTTTGATAGAATTTTCTGAATTCCTTTACTTGGT
TGCACGACATACAACAAATTTTGAAGAGACGGCAAAATATTTATTTCACG
TGTTTGACCACAGAGGGACTGGATATTTGAACAAAACACAACTTTGTGAC
GTCATGTCACTTGATCGTGGCCTCACATCGAACGATATTGAAGATCTCTT
ATCTTTTTTCAATTCCGATAGAAACAATAATGTTGATATTGACGGAAATG
GTTTGATAGAATTTTCTGAATTCCTTTACTTGGTTGCACGACATACAACA
AATTTTGAAGAGACGGCAAAATATTTATTTCACGTGTTTGACCACAGAGG
GACTGGATATTTGAACAAAACACAACTTTGTGACGTCATGTCACTTGATC
GTGGCCTCACATCGAACGATATTGAAGATCTCTTATCTTTTTTCAATTCC
GATAGAAACAATAATGTTGATATTGACGAATTCGTCCGTGTATTGAAGTA
CCTTCCGACGTCGTACGACGAAGAAGATCAGCAAAATAGCGCCACGTCAC
CCACACAACAGACTTCAAAAAAAGGAGGAAAACTCCCAAACAAAACATTA
CATCCAAATACATCAGAACAAAAAACAGAATCCATGCAAAATACCAAAAA
TCTTAAAAACAGTAATAGTAACAATACAAGCAAACAAATAAATAATACGT
CACCGAAAAAAACAAAAACACAGACCAGCCAATCATCGTCGAAAAACGAA
AGTGATAAAAAACAGACCCGCGATAACAACAACACCAAATCTACAAAAAC
ACAAAAAGTATCCAATAAGAATGGTAGTGTAAGCAAACCTTCAGAGAAAC
ATGGTGCAAAGAAGGCCTTAAATACCAAAATAGCTGTTCACGAGAATGGT
AAGACTACAGTCGGAATTGAAGTTTGAAATTCGTCCGTGTATTGAAGTAC
CTTCCGACGTCGTACGACGAAGAAGATCAGCAAAATAGCGCCACGTCACC
CACACAACAGACTTCAAAAAAAGGAGGAAAACTCCCAAACAAAACATTAC
ATCCAAATACATCAGAACAAAAAACAGAATCCATGCAAAATACCAAAAAT
CTTAAAAACAGTAATAGTAACAATACAAGCAAACAAATAAATAATACGTC
ACCGAAAAAAACAAAAACACAGACCAGCCAATCATCGTCGAAAAACGAAA
GTGATAAAAAACAGACCCGCGATAACAACAACACCAAATCTACAAAAACA
CAAAAAGTATCCAATAAGAATGGTAGTGTAAGCAAACCTTCAGAGAAACA
TGGTGCAAAGAAGGCCTTAAATACCAAAATAGCTGTTCACGAGAATGGTA
AGACTACAGTCGGAATTGAAGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000388_pilon | genome | sc0000388_pilon:167316..171726 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 517-963:448 |
| Aaloc | 283-513:2588 |
| Aaloc | 139-279:2946 |
| Aaloc | 106-135:3302 |
| Aaloc | 1-105:4412 |
|
