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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000330_pilon:113593..121574+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045598 ID=XLOC_045598|Name=XLOC_045598|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7982bp|location=Sequence derived from alignment at sc0000330_pilon:113593..121574+ (Clytia hemisphaerica_ch_hm2_pilon) ctaacaATCAACATGCGACATCACACTATTTCCCGCCATCTCCGCTGCTC
CATGCTGTGGGTATCGTATATCGTCAACTTAGTATCAGGGGGGTCAGGGT
CAGAATTCAACGGAAATTTGGCCGTTGAAATAGTTGTCTGGCCGGCAGAA
ATGCTATCCCGCCGGCGGAAAATTGACAGTCAGAATAGTCATCCGGCCGG
CGGAATTAAATGATGGTAACATTTCTCGTCTCGTGGTAACTGTTTGCCCT
AAAACAATAGTTATTTCAGAGAACgtgacagtcttttgaataactaatta
ctccagcataaatatttttaatgataaCGTCATgtaattgatttttcttt
tacaacacagctgttacctagggacaagataatttaacctttttattgTG
CTGGCTTAGGAAAAGTATATACAGGAGTAaattgttattcaatagaccgc
CGCATTCTCCTAAACAACTATCATTATTGAATTCAGGATTtactaaaatt
tatttaaaatcatTGTTTTGCAGCTCTGAAGGAGGTCAATCATTTTACCA
TTATTTTGCACCACCTCTTCCAAAGAATGTTATCATGTTTGCAACAAACA
ACAATTCAATCCAAGAACAGTTTGAAGTGAGAGTTAGTATTGATCCCAGT
GTAGAGGATAAGAAAATCGGCGAATTCTCAAGAGATAAAGATTGTTTTGT
ATGGAAAGTTGACTTGACAGAGGAAGAAGTGGATGCAacaaataaagttt
taaaaatggtATGGAAGGGTTTTTGTTCAAAGAAAGTCTTATAATTACTC
CCTCAAGCAGCTTTAGaagttttataaacaaaaaaggaaCCTTGTACATT
CACACAAAATTTTTACGTACTGCTTTTTGTTAACCTGTTTTTGTTGGACT
GTAATAAGGGTTTTCAGACAACCTGAACAAGGATCTATATTTCCTCCCAT
CTTAGCTTACAAAGTATAGTTACAATAAAAAGTTTGCAATTTCTTCCTTT
GATAACTTattaacaatttattttttcttaggaTCGATTACTTAAAATTA
GTGTGACCAAACAAGGAGCTGATGAAGGATTCTCTTCTCAAGACAAAGAT
GAAGAAGATTTAGTTTTTGATAACGACAATGATGATATcacagaatttga
aaaaagtttagaaaaatttgaagaCGACTTCAAGGAAAACcaatcagcca
tcaaaacacTTCATAAAAAGGTTGCTTCTCTACCAACCAAATCATCAACT
AAAAAGAAAGTATCCGATTTCTTCAAACCtaaacaacagaaaaaaaattc
tgatttcaaagctaaaacaataaCCAGTAAAGAAACTGTTCTGACAGAAA
CTAAAGATAAAGTCAATGACTCTGATGGTGATAAAGAACAAAAGGGAAAA
AGACCACACCCATTTGTCGAGTTAGTACACTCTATATTCTTTTATGTTTC
CATTAGACAACAGTCAGTTGACTTGGGTATCAATGAACTGAGAAGAGAGT
AGAGAACTCAATATTATCCAAAAGTTACTTTAGGCAtacaaactttcgcg
ggcagaaactttcgcgatgtcgaaaaatcgcgaaatgttattcgcgagca
taaactttcgcaaatcgttagataaaaatgagaattttcgaataaaaatt
gccttaaattgaaaaatattcattaaatCCACTAAAGACGATTGCTCTTC
GATTTTAAAATGGCATTAAAGGATAATAATATGCCTAAAATTTGATTTCt
attacgatttcgaggttttttgattttaaattttttaagaatatttcgtg
agcataaactttcgcgaattgccctgttaataattttcaaagacatttac
tttcgcgaaaaaggccaaagttcgcgaaattcgcgaaagtttctgcttgc
gaaactttttacgcctaaagtaatgGCGATCTTGACACTTGTCAACATCC
ATGAATTATACGTTGTTAATCACGCCTTAATTCATTCAGCTAAGTTTTTG
TCTCGACagctcaaatttaaaaagtgtaaTTATTTCACTAAAGACTGGTC
TTAATGATGATTTGTTCTAGCTCCCCTGAATCTAAACCAAAGAAAGCAAT
GATGCAAGCCAAACCTTCCAAAACACCAGAGATGGCTAAGAGAAGAGTCA
TAAGGAAATCTGGGAAGTCACCAGCAGCTAAATTTTCTGATCTCATTTCT
CATGAAAGTAAGCATTTGAGAAATTGCAattattgtttttgttgttaact
ggttgttgttttttttatgcgGTCTGTACGAGAtttttttAAGCAATGGA
ATTGGATCTTTTCGCACGAGGACAGGCTTACACAGCCTGTCTGACAAAAA
ATCGACAGGAAAATGACACTTTCAAATTTCTGCTTGATTGATTTAAAGAA
GTTATTACATGTGCGTCAAAAGAAGGTATTGCATTGTCTTTAAATTGTCG
ACTTTCTGTCGTCTTTTGTCTAAAATAAGGGAAGACTaaaaaatgctttc
aaaatCTTGTATTCAACCTTACAGATCCTACAGGACGGTGGGGTCATGGA
TGCTGCAAGATTTGTCATGATAAAGCAATAGTCATTGGTGGTCAAACCAA
ACAACAGATGAATACTGATTCTATGTGGCTTCTTGACTTGAGTAAGTAGC
ATGAAgcaataattcaaaatattgttgtggATCAATAgattattgtattt
ttttgcttgcCTTGATTCATCCCTGAGGTGATTTATTACCATGACAATTT
CGTTTCCTCTTCTAAATTCCCTCGATTAGATAAGGCTGTAACAATAACAA
AGGTGCTTGAATTTGACTGaaaaaagcaattataaaaaattaaaagttct
tTTGGGGTTTTAATTATTTAAGTCAGGAGATAATATTATAAAGAAGTGGT
ATTTTATATTCATTATAGCCTTGTTTTTCACCGATAGACACatcaaaatc
tctaaaaatcGAGTAGTCTTCTATTTAAAACCTTTTCAGAAACCCGAAAA
TGGGAGTTACAAAAGTCCGATAATTCTACAATTGATCGTCGTGTCGGACA
TAGTGTCGTATATGACGAAAAAAGAAACCTCGTTTTTGTTTATGGTGGAT
CAAAACCGAAGAAATGGTATAGTGATGTTTATGCACTGAATCTTGCCACT
TTCGAATGGGAAAAATCAGAGGTATATCTCTTTTTGATTCGAATCTATTA
TCAAAAGACATAAtcctgaaaatttgaagtcattttgttaaaaataaatc
aaaggatatttcactttcattttcggtCAGAGTGTGCAAACAGTACTTTT
AAAAATCgttttgtgtgaaaacaaaatagttttttatttgaaattttcac
aggtTTGCTTACGCACATTTCTACGTCACAAATATCAATTTCGTAATTTT
TCTAGAGATTTAATGTAGGTACTATTATATTTCTAGACCATTGGTAAAGC
CCCAACAAGAGCTTATCACTCATGCAACAAATTTCACGACGAACTTTTTG
TATTTGGGGGTGTTTACCCAAACCCTGACCCTGACCCTGATGGTTGCAGC
AATGAACTCGTCATTTATGATATTGGtatgtttttatatttcattaATAC
AAATTCATCATGTTTTCTGTTGTCATTCCCAaggaaaataaaagataaaa
gaggctCTTCTATTGAGCCAAGGGCGGGTATTTTAAGGTATCCTCAGAAC
ATTTATATCGTGTACATCCTTAAAGTTTTTCGAGATAATTCGCAGAATAc
ggacaaataaaaaaaaccgtgTGTCTGATTTTCAATCACTTCTTGTTTCT
TACATTTTCCTCCGAAAATTCACAAACtattttccacaaaaattttcttc
ttgaCATTTCAGCAAATAAAAGTTGGTACACACCTATCATTAGCGGTGAT
ATTCCGAATCCTCGATCGGGGTAAGTTCCTCACTCTAGATTTGACAACAT
CTCGTCGATCTTTTAATAACACTCCTGTACTGGTAAGAATGGAATTGTCT
TTCATATGTGGGAATTCAGATTCTACCGTGGCTGATCTGGTATTTCGAGG
TTTTTGGTTATTTTGCTTTCGGCAGCCGCCTTTTTAAGAGGCGACCGCCA
GTTTTAATCCGCGGCCGCCTTTTACAAAGAGCGGCTGCCTATAATACTGG
CGGCCGCCTTTTATGATAAGCGGCCACCTTTTTCCTTCGAAGAAGGAGGC
CGCCCTTTATtacgatggcccctaaggctcaccacgcacttccagttctt
ataaaatttgtgaactagaactgtctagggtcatggcccagaaggctcac
aagacactgcgcacttccgagtttttttGTGACGACATTGcacacttcta
aaaatattttagaaacgTAAAAGTCCCCCTCGAAAGATAGCcgttctggt
cagcaaaatagataccgAGTTGTAATAAGTGAGTTGATGATAATAGCGAA
GAGGCTCGgaaatcccgagttattttCTTGAGTTCAAAAGCCGAGTTAGT
TAcgaaaaaccgagttatgacgttatttttcggaaatttcGACGTCATTT
TGTACCTTCTATATGACGTCATTCTCAATTCTGTAGCTCGttttttttCC
TTGCctttaaaatttcgagttatctCTGATGGTATCTAAACTCAAGTAAG
TCCtgcctttaaattttcgagtcatttctcgttttttaactcggttttgt
ttcttttaaattttcgagttattttccttcctgTACATTCTCGGATTCTC
GAATTATTTTCACAGCAGAAGGCTcaaaacacacacacacacacacactt
cTAGTTTTCATGCACTTAGGGTGGTCCTATGGCGGAAAATACCAGCGGCG
TGGaggcaaaaaaacaaagttgatatttgcTCACTTTTTGCTTCCCAGAT
TTTTGCCACTGGGGGGAATTTTGCAGACCAGGACTTAACTCAGAAATTTT
AACctgtaactcttgatatgagcaactcggaaattttaactcattttgcg
taactcgacattcattttatagaccaaaaaaaaaattgatcgcgcgggcc
gctcgcttggaaatttcccgccctgacaaaaagtcagaagtgcgcagtgt
cacttgagccttctgggccattgaccctaggcagttctagttcacaaatt
ttataagaactggaagtgcgtaaaaactagaagtgcgtgttttgagcctt
ctgggccatcgtaCTTTATAACTGGCGCCCACTCTTTATAACAGGCGGCC
GCCCTTTAAAAACGCGGCCGCTATTTATAAAGGGTGGCCACGTTTTTTAA
AAGGCGGCCGCTTCTTTTACCGCCTTTTTCATAATCTGGTCTGTGAAATA
CAAGAGTCGTCAAAGTTAATCGCGTGGTAAGGATAGGATTAGAGTGTAaa
tatatatacacagtataatataatatacaatatacaGTACTGTACAGTAC
TGTAATCGAGATAATGTTTTTAGAGCCGAACATCAACTTGGGTGTGATTG
ACCTGGTCAAATCCTTCTCACCACACTCACCACATACATAAAATCACATG
GGTAGCTACcatgtttgtttatgtttagCCAATACATTTCACAGACCAGA
TTATGAAAAACGCGGTAAAAAACGCGGCCACCTTTTATAAAACGTGGCCG
CCCTTTATAACTGACGGCCGTCCTTTATAAATAGCGGCCGCGTTTTTAAA
GGGCGGCCGCCTGTTATAAAGAGTGGCCGCctttttcgaaggaaaagggt
GGCCGCTTATTATAAAAGGCGGCCGCCAGTATTATAGGCGGTCGCTCTTT
GTAAAAGGCGGCCGCGGATTATAACTGGCGGCCGCCTCTTAAAAAGGCGG
CCGCCAAAAGCAAAATAACTAAAAACTTCGAAATACCAGATCAGCCACGG
TAAGATTCTATTGCTTACCCAAAAGATTCAGTTGGGATTCTCAAAGCTTT
AGGGTCAGTGAAGAGTAGCTTTCTAATGAAAGAGGGAGATGGAATTTCAG
GGTGTTTCTTAACGCCTGGGATTATTTCTTGAACTGTCCTGAACAGTAAT
TTTTCCGATAGGTAAATGTAAATGGTTCTGTGACATAGGGGTGTTGAATA
TTTTGGAGAATTATTTGCTGAATCTAAAAATGCTTTTTGGCATTAGCTGC
TTTTCAGTCGTTTATTCATCTatccaacgatgtaaaaataatagataacc
aacttgccttgattctcaaaaaacatccgtgtacggttgtaaaaatatta
atgacattttgcatcgtaaaaagtgcaattaaataaaaatttgcttcatt
tgcaaccttctattggacagaatcgatcacgtgatgtatatttttccaaa
atttgggttagaaaaagtgtattttcctataggcagcctcacagaaggaa
ttttttaattagatattattgttctataaacattcatctgtttattttgt
atcaggcaaccttcatgcacttttcattcgtgagatatcgcatttcaaat
cacacatatatttttcagataacagcattttatgagcgtttatttatcca
gatgaagattaagtggtatcaggccgatctgTAGTCcttttgtctaaaga
ttggtacctttatcttttgaaaaaaaATCAAAAATTTGCAGTAAATAACA
ATTCAAATTTTCTATCAATTCAGTGTATGTCAAAAAGTGTGTCAAAATCT
AGCTAAAAGCATAACACGCACTGCACACAgagctttttaatagagtgctc
atttcaataggaaaacaatggttgttctcttgagagaagtgccttctaga
ggtagttggttatctattatttttacatcgttgatctATCTTTGTAGTCA
TTCAGCAGTGATGATTGGTTCCAAATTGTACATTTTCGGTGGCTGGGATG
CGCCGACCTGTCATGATGATATCTATTGTCTCGATATAGGTAAATTACAA
CATTTGTATATCCTTTCAACTCGTATCATTGTTTTCCTTCGGAGACAAAT
TTCCATTCATTTTCACCGCCTATGGAATAACAATAGGATCCCAAAAGAAA
ATCATCTCAACTGAAAAGACAACTAAATAAACTTGTCTTAAACTTGTTGG
CTATCGAAAAAGAtcttcaattcatgatatgcaccactgcaatgacttca
cgaaattatgcaacttttctgtttttgttccacccaatacgtcacttttt
ctattcttAAAGTGACATATTGGATGGAAAAtcttaaaagttctcagaag
actcttcAGTGGTGCAAATCATGAATATTTTAATAGAGTAGATATTCAAT
ACTTTTATGCAATAAGTTCCATATTTTAATGCAAGATCATTTTAAAGCCA
AGTATTTCTTCCCAGCGACGACTTTACTAAACAACCACTTTAGTTTGGTC
AAATTTAATCGTTTTAACTTTAACTTTCTCTTCATAGTCATAATGAAGTA
TACGAGATTGAAACCTATTGGTGAAGGTCCGTCTGCCCGTACTTGGCATT
CCACCTCTGTTCTATCAAATCCAAATCAATTTTGTATTTATGGTGGCTTC
GATGGCAACGACAGTTTGAATGATCTTTTTGTTTTCGATTCAGGTAAACC
GGTGCCaaaaaaaGGCTAggaaattgagcttttttttgaCAGGAACTCGT
CtttttttACAAGGGAAAACACGTACTCAGGACTCGGGGTTCTGAGGCTG
TTTGACTTTAGTCTTCTTTACCTGACTATACCAAATTtattttgtgttat
tttgttttgagattACTTCTTTTCTTCTGTTTTAGTCAAAACGTGTTGGA
GCAAGATACATAACGAGCATAATTCCATTTTACGTGCTGGTCATACATCA
CTGTTGATGACGTCACCATATAgtgatgatgacgtcacaaaagcCAACAA
CAAAAGTCAGGTGTTAATTTTCGGAGGCGGTGATAACGCCGGACAATTTT
ATAACGATGTCATTCTACTGGATGTGAAATAG Coding sequence (CDS) from alignment at sc0000330_pilon:113593..121574+ >XLOC_045598 ID=XLOC_045598|Name=XLOC_045598|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3516bp|location=Sequence derived from alignment at sc0000330_pilon:113593..121574+ (Clytia hemisphaerica_ch_hm2_pilon) ctaacaATCAACATGCGACATCACACTATTTCCCGCCATCTCCGCTGCTC CATGCTctaacaATCAACATGCGACATCACACTATTTCCCGCCATCTCCG CTGCTCCATGCTCTCTGAAGGAGGTCAATCATTTTACCATTATTTTGCAC CACCTCTTCCAAAGAATGTTATCATGTTTGCAACAAACAACAATTCAATC CAAGAACAGTTTGAAGTGAGAGTTAGTATTGATCCCAGTGTAGAGGATAA GAAAATCGGCGAATTCTCAAGAGATAAAGATTGTTTTGTATGGAAAGTTG ACTTGACAGAGGAAGAAGTGGATGCAacaaataaagttttaaaaatgCTC TGAAGGAGGTCAATCATTTTACCATTATTTTGCACCACCTCTTCCAAAGA ATGTTATCATGTTTGCAACAAACAACAATTCAATCCAAGAACAGTTTGAA GTGAGAGTTAGTATTGATCCCAGTGTAGAGGATAAGAAAATCGGCGAATT CTCAAGAGATAAAGATTGTTTTGTATGGAAAGTTGACTTGACAGAGGAAG AAGTGGATGCAacaaataaagttttaaaaatggaTCGATTACTTAAAATT AGTGTGACCAAACAAGGAGCTGATGAAGGATTCTCTTCTCAAGACAAAGA TGAAGAAGATTTAGTTTTTGATAACGACAATGATGATATcacagaatttg aaaaaagtttagaaaaatttgaagaCGACTTCAAGGAAAACcaatcagcc atcaaaacacTTCATAAAAAGGTTGCTTCTCTACCAACCAAATCATCAAC TAAAAAGAAAGTATCCGATTTCTTCAAACCtaaacaacagaaaaaaaatt ctgatttcaaagctaaaacaataaCCAGTAAAGAAACTGTTCTGACAGAA ACTAAAGATAAAGTCAATGACTCTGATGGTGATAAAGAACAAAAGGGAAA AAGACCACACCCATTTGTCGAgaTCGATTACTTAAAATTAGTGTGACCAA ACAAGGAGCTGATGAAGGATTCTCTTCTCAAGACAAAGATGAAGAAGATT TAGTTTTTGATAACGACAATGATGATATcacagaatttgaaaaaagttta gaaaaatttgaagaCGACTTCAAGGAAAACcaatcagccatcaaaacacT TCATAAAAAGGTTGCTTCTCTACCAACCAAATCATCAACTAAAAAGAAAG TATCCGATTTCTTCAAACCtaaacaacagaaaaaaaattctgatttcaaa gctaaaacaataaCCAGTAAAGAAACTGTTCTGACAGAAACTAAAGATAA AGTCAATGACTCTGATGGTGATAAAGAACAAAAGGGAAAAAGACCACACC CATTTGTCGACTCCCCTGAATCTAAACCAAAGAAAGCAATGATGCAAGCC AAACCTTCCAAAACACCAGAGATGGCTAAGAGAAGAGTCATAAGGAAATC TGGGAAGTCACCAGCAGCTAAATTTTCTGATCTCATTTCTCATGAAACTC CCCTGAATCTAAACCAAAGAAAGCAATGATGCAAGCCAAACCTTCCAAAA CACCAGAGATGGCTAAGAGAAGAGTCATAAGGAAATCTGGGAAGTCACCA GCAGCTAAATTTTCTGATCTCATTTCTCATGAAAATCCTACAGGACGGTG GGGTCATGGATGCTGCAAGATTTGTCATGATAAAGCAATAGTCATTGGTG GTCAAACCAAACAACAGATGAATACTGATTCTATGTGGCTTCTTGACTTG AATCCTACAGGACGGTGGGGTCATGGATGCTGCAAGATTTGTCATGATAA AGCAATAGTCATTGGTGGTCAAACCAAACAACAGATGAATACTGATTCTA TGTGGCTTCTTGACTTGAAAACCCGAAAATGGGAGTTACAAAAGTCCGAT AATTCTACAATTGATCGTCGTGTCGGACATAGTGTCGTATATGACGAAAA AAGAAACCTCGTTTTTGTTTATGGTGGATCAAAACCGAAGAAATGGTATA GTGATGTTTATGCACTGAATCTTGCCACTTTCGAATGGGAAAAATCAGAG AAACCCGAAAATGGGAGTTACAAAAGTCCGATAATTCTACAATTGATCGT CGTGTCGGACATAGTGTCGTATATGACGAAAAAAGAAACCTCGTTTTTGT TTATGGTGGATCAAAACCGAAGAAATGGTATAGTGATGTTTATGCACTGA ATCTTGCCACTTTCGAATGGGAAAAATCAGAGACCATTGGTAAAGCCCCA ACAAGAGCTTATCACTCATGCAACAAATTTCACGACGAACTTTTTGTATT TGGGGGTGTTTACCCAAACCCTGACCCTGACCCTGATGGTTGCAGCAATG AACTCGTCATTTATGATATTGACCATTGGTAAAGCCCCAACAAGAGCTTA TCACTCATGCAACAAATTTCACGACGAACTTTTTGTATTTGGGGGTGTTT ACCCAAACCCTGACCCTGACCCTGATGGTTGCAGCAATGAACTCGTCATT TATGATATTGCAAATAAAAGTTGGTACACACCTATCATTAGCGGTGATAT TCCGAATCCTCGATCGGGCAAATAAAAGTTGGTACACACCTATCATTAGC GGTGATATTCCGAATCCTCGATCGGGTCATTCAGCAGTGATGATTGGTTC CAAATTGTACATTTTCGGTGGCTGGGATGCGCCGACCTGTCATGATGATA TCTATTGTCTCGATATAGTCATTCAGCAGTGATGATTGGTTCCAAATTGT ACATTTTCGGTGGCTGGGATGCGCCGACCTGTCATGATGATATCTATTGT CTCGATATAGTCATAATGAAGTATACGAGATTGAAACCTATTGGTGAAGG TCCGTCTGCCCGTACTTGGCATTCCACCTCTGTTCTATCAAATCCAAATC AATTTTGTATTTATGGTGGCTTCGATGGCAACGACAGTTTGAATGATCTT TTTGTTTTCGATTCAGTCATAATGAAGTATACGAGATTGAAACCTATTGG TGAAGGTCCGTCTGCCCGTACTTGGCATTCCACCTCTGTTCTATCAAATC CAAATCAATTTTGTATTTATGGTGGCTTCGATGGCAACGACAGTTTGAAT GATCTTTTTGTTTTCGATTCAGTCAAAACGTGTTGGAGCAAGATACATAA CGAGCATAATTCCATTTTACGTGCTGGTCATACATCACTGTTGATGACGT CACCATATAgtgatgatgacgtcacaaaagcCAACAACAAAAGTCAGGTG TTAATTTTCGGAGGCGGTGATAACGCCGGACAATTTTATAACGATGTCAT TCTACTGGATGTGAAATAGTCAAAACGTGTTGGAGCAAGATACATAACGA GCATAATTCCATTTTACGTGCTGGTCATACATCACTGTTGATGACGTCAC CATATAgtgatgatgacgtcacaaaagcCAACAACAAAAGTCAGGTGTTA ATTTTCGGAGGCGGTGATAACGCCGGACAATTTTATAACGATGTCATTCT ACTGGATGTGAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000330_pilon | genome | sc0000330_pilon:113593..121574 + |
Properties
| Property Name | Value |
| Aaloc | 1564-1758:7788 |
| Aaloc | 1408-1560:7440 |
| Aaloc | 1315-1404:6849 |
| Aaloc | 1258-1311:3865 |
| Aaloc | 1117-1254:3437 |
| Aaloc | 937-1116:2992 |
| Aaloc | 820-933:2527 |
| Aaloc | 682-816:2072 |
| Aaloc | 292-678:1032 |
| Aaloc | 58-291:525 |
| Aaloc | 1-54:1 |
|