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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000330_pilon:241452..244166+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045594 ID=XLOC_045594|Name=XLOC_045594|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2715bp|location=Sequence derived from alignment at sc0000330_pilon:241452..244166+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACAACAAATACATCATTGTCGGCCGACTCTTCAAACCCATTGTGCA
AGCTTTCCTTGTCAATGGACAACGATACAATCTTCTCAACTCCGCCATCT
TAGAACTTTTCCAATTCATTTTAAATGTAAGTTTCGAGGTTTTCGACAAT
TTACAATCTGACTTTCGCTTCATAATGGTTTTTGCTCGATCTGATCAGAA
AGAAAAGCGCCTTACTCAAGTCCAAGACTGTTCTATAGATTTTTAAAAGA
TAATGTTTGTATCTGTTCAAGATACTTGGGTTCGTGGTGTTTTATATCTT
TCTTTTGCATTACAGGAGGACATAAAAAGTCTGGTAGCCTACATAGTTGA
AAATCATATTCAAGCATTTCGAGATATCACGTATGTTGACACGTTCGCGG
CACTTGCTGTCCGCTATGAACATCAAAACCAAGAGAAACGAAGGCTGGAT
GATTCCCAAGACAGGTAAGGAATTGAGCTCCGTAAATGCTCACGGCTGAC
CATCGTGTTGCtcaaaggaattttttttaatgtctgGCTCAAAGCCGTAT
TCAATTCGGTGCGGATTCTGCTTGCAAAGCGTTTTCCGTTTTCAATGCAT
GGAGGTTTTTTCCACACGGGAAATGCAAATTAATGTAAATTTAGATTATC
TCTTAAAAACGGTCTTCACTCTTTACTCTAATATGTCTACATTTTGCAAG
TTTCTTTCTGTTCTCCCCTCATCCAAATATATCACTGCCCTAGCCGTATT
ACTGCGAAAAAATGTTTCGGATTTTAGGAGGGCCGTTTATTGGAGaaggc
gtttaaaagaagggggcgtttattaaactTTAATAAATTGAATGGGAACC
TTATTTTttgacctaccccggtggaggtcctataaattaacctatgtttg
ttcgtccgtccgttcgttcgtctgttaccaactattctcaggattgaatc
ataggaatcttttgatttttggtataaaggtgcaaaatggtggtggccaa
aatgtgatttttgcatgaaagtaggtaaaagatggctcaagcagattttt
gtaaaaaaagaattttttagctaaaaaacgcatgtttatctataagaatc
gctattAATAAGGATACAtaaatgttcttagccaaattacttaatttttt
gataagatAGATGTATTtcttgctcacgaagtcttgaatatgaaagaata
tttcaagggcatgaaattttggtttctaaacttttttttttataagaaac
aaacgactaattttaatagatcgtcactactTGTGTtgtgaatgattgtt
taacggtcatgctcacgtagatatcaattatatgtgttaaatgcataacc
aggtaggtccataaaagtatcacttgttcccTTTCGTTCTCTTTCAGTTA
TTATATGTCATTTTggaaatgggtaaaaatgggtcaaaattagtttcaat
acAATGATCAACACATATGTATAAGTACGGGGGAGGCGTTCATTCGAAGA
GGGCGTTTATTGAAGAATTTTCCTTaagggaggggcgtttattcgaagta
atacggtattttgTTATGCATCTTCTAGAGATTCTGGGTACGCTTACGGT
GGCGGTGGTATTATTCACGATCAGCCTTCATCACGCGAGAAACGTGACGA
TCGAACGATGGACTCGTACGAAGAGGCTTGGTTTCGTTctgacgatgatg
atgatgaactACCAGAACTTCCGACCGATCAAACCATTCCCCCTTCTACT
GAGATCGCCGATGGCGCCACCACCAAACCGCTCAGTGCCAAACTCAAAGA
TGTCGAACTTTTAGATAACAAGAACTCTTCTGAGACTCACAATGCTACAA
ATGGACCATCAAGTCCTGTACATAATAATAATTCCCCGATTATCGATCAT
ATAAACAGCCAACCGAATCATAATTCCGATACGGAAAAATCGGATTCAGT
ATTTTCTACGAATAACAAGACATTTAATAATAAACCCTTGATGAATAATC
GTTTGATTCAGAACAAGTTTCAGATCAAAATCAACTCCACTATATCTTCG
TTGGCGAATCACGCGGACGAACTTAAGAATGGCGATACACCGAAAACGAC
CGGCGATCAGCCGATGGAGGTCGACGATTCCTCGCCTGCTGCTAAAACGA
AACCGGTAGGGCTTTTTCTTTGTCGCTCATGACGTTTTTAAGCTTGATTT
TACCTAAATCGACTTCACTTGGTAGTAATAAGAGATAGTGATCAGTGGAT
TTCTTCTATACACCAGCGGTTTGcttgaatgggctttttcacttgcgtaa
atgcgtgaagattttaaaaaaGCTGCGTGGATGTGTGAACTATAAAACTT
TGCGTGAACAGTAATtacgtgaatttcgaaaaaaagagtgcgtgaatgcg
tgaatttcgaaataAAATTGAGGGATTGCGTGAATTAAAGGtctgcgggg
ggggggggctcttctATTGTGTGACGTTTTCAATTTCTCTGAATGACAAA
ATGACCGTATTTTCAATTTCTACGTATGTCATATTgataaaactttattt
tcacCTTCTTTTTAGTTGTTGGGAGGTCTGGTAGATTATCCCAGTGATGA
TGATGACGAGGATGAAGAATCCTGCCTTCAAAACAACACGCCCACCGCTA
CCCCGCCCATCGAAAACGAAGTCCCTATTTCACCGGCAAAGAAGCAGCGT
ATAAGTTCCAGTTGA Coding sequence (CDS) from alignment at sc0000330_pilon:241452..244166+ >XLOC_045594 ID=XLOC_045594|Name=XLOC_045594|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2004bp|location=Sequence derived from alignment at sc0000330_pilon:241452..244166+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACAACAAATACATCATTGTCGGCCGACTCTTCAAACCCATTGTGCA
AGCTTTCCTTGTCAATGGACAACGATACAATCTTCTCAACTCCGCCATCT
TAGAACTTTTCCAATTCATTTTAAATATGTACAACAAATACATCATTGTC
GGCCGACTCTTCAAACCCATTGTGCAAGCTTTCCTTGTCAATGGACAACG
ATACAATCTTCTCAACTCCGCCATCTTAGAACTTTTCCAATTCATTTTAA
ATGAGGACATAAAAAGTCTGGTAGCCTACATAGTTGAAAATCATATTCAA
GCATTTCGAGATATCACGTATGTTGACACGTTCGCGGCACTTGCTGTCCG
CTATGAACATCAAAACCAAGAGAAACGAAGGCTGGATGATTCCCAAGACA
GGAGGACATAAAAAGTCTGGTAGCCTACATAGTTGAAAATCATATTCAAG
CATTTCGAGATATCACGTATGTTGACACGTTCGCGGCACTTGCTGTCCGC
TATGAACATCAAAACCAAGAGAAACGAAGGCTGGATGATTCCCAAGACAG
AGATTCTGGGTACGCTTACGGTGGCGGTGGTATTATTCACGATCAGCCTT
CATCACGCGAGAAACGTGACGATCGAACGATGGACTCGTACGAAGAGGCT
TGGTTTCGTTctgacgatgatgatgatgaactACCAGAACTTCCGACCGA
TCAAACCATTCCCCCTTCTACTGAGATCGCCGATGGCGCCACCACCAAAC
CGCTCAGTGCCAAACTCAAAGATGTCGAACTTTTAGATAACAAGAACTCT
TCTGAGACTCACAATGCTACAAATGGACCATCAAGTCCTGTACATAATAA
TAATTCCCCGATTATCGATCATATAAACAGCCAACCGAATCATAATTCCG
ATACGGAAAAATCGGATTCAGTATTTTCTACGAATAACAAGACATTTAAT
AATAAACCCTTGATGAATAATCGTTTGATTCAGAACAAGTTTCAGATCAA
AATCAACTCCACTATATCTTCGTTGGCGAATCACGCGGACGAACTTAAGA
ATGGCGATACACCGAAAACGACCGGCGATCAGCCGATGGAGGTCGACGAT
TCCTCGCCTGCTGCTAAAACGAAACCGAGATTCTGGGTACGCTTACGGTG
GCGGTGGTATTATTCACGATCAGCCTTCATCACGCGAGAAACGTGACGAT
CGAACGATGGACTCGTACGAAGAGGCTTGGTTTCGTTctgacgatgatga
tgatgaactACCAGAACTTCCGACCGATCAAACCATTCCCCCTTCTACTG
AGATCGCCGATGGCGCCACCACCAAACCGCTCAGTGCCAAACTCAAAGAT
GTCGAACTTTTAGATAACAAGAACTCTTCTGAGACTCACAATGCTACAAA
TGGACCATCAAGTCCTGTACATAATAATAATTCCCCGATTATCGATCATA
TAAACAGCCAACCGAATCATAATTCCGATACGGAAAAATCGGATTCAGTA
TTTTCTACGAATAACAAGACATTTAATAATAAACCCTTGATGAATAATCG
TTTGATTCAGAACAAGTTTCAGATCAAAATCAACTCCACTATATCTTCGT
TGGCGAATCACGCGGACGAACTTAAGAATGGCGATACACCGAAAACGACC
GGCGATCAGCCGATGGAGGTCGACGATTCCTCGCCTGCTGCTAAAACGAA
ACCGTTGTTGGGAGGTCTGGTAGATTATCCCAGTGATGATGATGACGAGG
ATGAAGAATCCTGCCTTCAAAACAACACGCCCACCGCTACCCCGCCCATC
GAAAACGAAGTCCCTATTTCACCGGCAAAGAAGCAGCGTATAAGTTCCAG
TTGATTGTTGGGAGGTCTGGTAGATTATCCCAGTGATGATGATGACGAGG
ATGAAGAATCCTGCCTTCAAAACAACACGCCCACCGCTACCCCGCCCATC
GAAAACGAAGTCCCTATTTCACCGGCAAAGAAGCAGCGTATAAGTTCCAG
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000330_pilon | genome | sc0000330_pilon:241452..244166 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 853-1002:2566 |
| Aaloc | 277-852:1580 |
| Aaloc | 127-273:316 |
| Aaloc | 1-126:1 |
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