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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000330_pilon:142912..146599- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045588 ID=XLOC_045588|Name=XLOC_045588|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3688bp|location=Sequence derived from alignment at sc0000330_pilon:142912..146599- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCAGACAATGTGAGCAAAACAATGAAAATCATTTCAACAGTCAG
CTTGGGACATCTGGCAGGAATTACAGCATTTAAAAGCAGTTGCATACAAC
CTGCTCTTGAAGAACAAGAAGATGTACCAGCTGCAGCCAAGGTATACATC
TCAACTTTCTTTTTTTCGTCCACTTTATTCATCATTTCGACCCTAGTTGT
ACAGACAGACGCGTGCCATTTAATTGCTTATGATCGTCCTAAGCTCGATC
TAATCCTTTTTGACGCCCTTTTCTTTCGTATTTATGTGCGAGAAAAAGAC
TTGAGACCGGTTTAAGGTGATGTAACTGGACAAAAAAAGTGCTGATCTGC
TGCTACGGTTGCAAAGGTGTTTCACTTTAACAACAACTTCTAAGTACTAC
AACCAGGGGGGGGGGCACGCAGTTACTACAAGACATGAAGTGCTTTTTCA
ACACTTTTTTTCAGGACCACCACCCTTTGCAGTTACTACACCTTGGTAGT
AACTGTTTTCAGAAAAGATTTCCAGGTACCACCCTTGTTTTTGAGTGATA
TCATCAAAAACATGCTCGAAATTATCCTAAATTGCGATTGTTTTTCAACC
TAAAGCCATTTTTGTGCTAGATTTTCTTTTAATTTACTTGGTTAACAGCT
GTTGAGAACATTTTAATGATAATTAGGGAAAGCATAATTTCAAAGTTGGG
TCTGAGAAAAATTTCAAATTTTTTTCGTCCATTTATATCAAAAATATTTT
TTTTAACAAAGAATTTTTTCACAAAAAAATTCATTTTTTGTGAAAAATTT
TGAAAGTTCTTTTAAAAGAATTAAAATACAAGCACTTGATACACCAAAAG
TGCTAGTTTTAGTGTTTGGCACCACCCCCAAACAGCAGTTACTACACTGT
GTAGTAACTGTTTTCATAACTTCTGAATACAGTACCACCACGGTAGTAAG
TGTCATACTGTCTTGTAGTAACTGCGTGCCCCCCCCTGCTACAACCAATA
TAATCGATATGAACAGTTTAGAACAGTAAAATGAAAACTGTTATTTACTG
TGATATATCCTAAAGGGCCTAAAGGCATTTGATATTGATTGATCCCTGCT
CCCAAAAGTTATGTTAACCACCTAAGGCTGAATTTTAAGCTTGGCAAATT
TAAAAATGAAATAAATATTTTCTTCCTTATTATCGTCGCAGTGTCGAGTT
TATAGTGGTTTCAGTGGGCTCTTTTAATTTATAATCCTCTCGACTTAGCT
AAGGGGCCGTAAAACCGTGGTCTGCAAAATAGCTAGTTTTTCGTGAATTG
AAAAATTGGTGTCTTCATTCTTTAATTTCGATCAATTATCGATTCTTATT
CATTCAGTTTCAACTATGAATAAAATTTCAACTTTTTCTTTTTCATATAA
AAGAAAAATTAGCATCATAAATGCAAGTGAAAGGCTGTGGGATGCATTTA
AAGTTATGTACTAAAATCATAGTTTTTCCAAAACTGCACGGGTTTGAGTA
ACTTTTGAAAGTTTATTTTTCTTGAAATAACTCAACATTACTTCGTGTGA
GGTCCTCCGAAGTAGGGGCTAATTCCAGATGCAAAAGAAAAGCAGAAAAA
TCCTAAGAAGTGTCACAAAAATCTCAACTTTAACTTTGAAGCCGCATAGG
TCAAGTTTGCGACGTCGTAGATTTCGCCCTTTTCGCCCCGACCTATGGTT
GGGTCCGCAATTTATCTGGCTTTCAGGAAAACCCAAATGGGAATTCCCCT
ATCGAATATAACTGGTGCAGTTTTGAATTTAGTGAAACCCCCTACCTGGC
CAACCAATAGAAGCTTTGTTCGAATAATTTGTTAAAATTACAGACCAGAC
CGAAATTGCTGAAAAACTTGCCGTGTGATTGGCTTATTCGCGATAAATCG
ACGATTCTGATTGGCTTAGAAAAAACGATCTCGTAAAAAAAAGGAGGCGG
TGGAATGAAAATTTTGAAAGAATCTTTCCACTTTTTGATAAAAAATCCCC
TCAAAATCCTTTTTCCAAGCAAAGAAATATTCAGCTTAGGACTCAGACTA
AGACTGAAAATTATCAAAGATATGCAATAATAATTGTGGTAAGGGATGGA
GACAAAATTAAAAATCAAAACAAACAAAACAATTTTATGAAATATATTTA
TCAAAAATCATAAAGGTGGGTTCAAAGCTCACCAAGTCACATCGTGTCAC
ATCTCAGTTTGTAAAAGACTAATAATATTTCAATAAGCAGCATCCTAAAA
ATGAAACAAAGGAAAATCAATCCAAGAATATTCAGCTTGACAGATCTCTT
CCTGTGAACAGTTATGAACGCTGAGAAAGACTCAAGTGATAAGAATTCTA
CAAAGAGGAGGGTAGCCAGACAGGAGACAGGGGTGGTTGGTTGGTTTCTA
GCAATATTTCTGGAAGGAAGTTTTCCCATGCATTGAAGTATTGTCAATTT
TTAAAGGAGGATTTTGATATGAACTGGACAGCAATCAATCGGTTTTTCAT
TTTTCCACCTCAAAGTCAAAGAAGTAGGAGTACTGAGCGGGAAAAACAAA
AGAACAAAAAATGCAAAGAAACTGAGACTACATATTTTACAAAGCATTGC
TTACCTTCTTGTATCGACAAAATGCTTTCTAAATCAAACTGCACCATTAC
AATAATTTCTTCCTTTTCCAACAGTCTTGATTTGTTGATGTGATGTGGCT
TGAAATTCTTCTTTTACTTCTTTTTTCCTTGCTTGAGTAGCCAACCAAAT
ATCGAAAAAATCTATATCGAGCTGCAGAGATCCACCTAAAACTTATTTGA
ACCGATAACAAAAATTTGAACACAGAAAACTGAGGTTAACGAAGCCTTTC
TCTTTCTCATTATTATTGAGAGATATTTTGAATGAAATATTGCAGCAGAA
ATGCTCTTGGTTTATTAAGATGAAGAACATATCCATAGATTGAATGATGG
TCCTTCCATTAAATACAAAGGCATCTTTCAAACAAAGAAACTTTGAGTGA
CCTTCTAAGAAAAATCTCCCACCCCTCTATTCGCTTTTTTGAAAAAATAA
AGTGGACTTCGAGAAATTTCCATACAAAACATTTCCAAGACCGTCCAGAT
TGCTCACACATACCAAATTAAAATCGAATAAAACATTCGAAAAATAGTCA
CGCGCGTGTGTTCGATGATAAACATTCGAATCTTAAAAAGCTAGTTTACA
CGGCGAAAAAAGAGAAGAATTGAAACAAGGCTCTATTTATACTCGCGCGC
GGAGAAAAACAAAATTTTTCGAAAAATCACGTCCTTAGACAACTCGAGCT
AAAATACTCCAAAGTCAGTTCTTACATTTTTTGATTATCTTCTTTTTTTC
CACAGACCATGTCATGTATCTTGAAGCGTTCATCTGTTCTCCCGATCGTC
AGTATCGTTTCATCAGCCTCTTCTCTCTACGTTTATTACAAATCGTATGG
TACAAAGAGCGAGGATGAGTTCTACCTCATCTCATCACTTATGATCGGTG
GTTTGGTCCCATACACAGCTTGGATGTTATTACCCATAAACCAACACTTC
TTATCAGAAGGTGAAACGTTCGAACACTCAGATGAAAAATGGAAATTCCT
AATGAAAGATTGGAAGAAATGGCATCTACCTAGATCTGTCGTTTGTGCTT
CTTTATTCTCGATGGCCGTATATAAATTGGTGTTTTAA Coding sequence (CDS) from alignment at sc0000330_pilon:142912..146599- >XLOC_045588 ID=XLOC_045588|Name=XLOC_045588|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=948bp|location=Sequence derived from alignment at sc0000330_pilon:142912..146599- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCAGACAATGTGAGCAAAACAATGAAAATCATTTCAACAGTCAG
CTTGGGACATCTGGCAGGAATTACAGCATTTAAAAGCAGTTGCATACAAC
CTGCTCTTGAAGAACAAGAAGATGTACCAGCTGCAGCCAAGATGGCATCA
GACAATGTGAGCAAAACAATGAAAATCATTTCAACAGTCAGCTTGGGACA
TCTGGCAGGAATTACAGCATTTAAAAGCAGTTGCATACAACCTGCTCTTG
AAGAACAAGAAGATGTACCAGCTGCAGCCAAGACCATGTCATGTATCTTG
AAGCGTTCATCTGTTCTCCCGATCGTCAGTATCGTTTCATCAGCCTCTTC
TCTCTACGTTTATTACAAATCGTATGGTACAAAGAGCGAGGATGAGTTCT
ACCTCATCTCATCACTTATGATCGGTGGTTTGGTCCCATACACAGCTTGG
ATGTTATTACCCATAAACCAACACTTCTTATCAGAAGGTGAAACGTTCGA
ACACTCAGATGAAAAATGGAAATTCCTAATGAAAGATTGGAAGAAATGGC
ATCTACCTAGATCTGTCGTTTGTGCTTCTTTATTCTCGATGGCCGTATAT
AAATTGGTGTTTTAAACCATGTCATGTATCTTGAAGCGTTCATCTGTTCT
CCCGATCGTCAGTATCGTTTCATCAGCCTCTTCTCTCTACGTTTATTACA
AATCGTATGGTACAAAGAGCGAGGATGAGTTCTACCTCATCTCATCACTT
ATGATCGGTGGTTTGGTCCCATACACAGCTTGGATGTTATTACCCATAAA
CCAACACTTCTTATCAGAAGGTGAAACGTTCGAACACTCAGATGAAAAAT
GGAAATTCCTAATGAAAGATTGGAAGAAATGGCATCTACCTAGATCTGTC
GTTTGTGCTTCTTTATTCTCGATGGCCGTATATAAATTGGTGTTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000330_pilon | genome | sc0000330_pilon:142912..146599 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 142-474:334 |
| Aaloc | 1-141:3689 |
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