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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000330_pilon:204440..210050- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045585 ID=XLOC_045585|Name=XLOC_045585|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5611bp|location=Sequence derived from alignment at sc0000330_pilon:204440..210050- (Clytia hemisphaerica_ch_hm2_pilon) CAACGTTTCATTTGGCCGAAGAAAAAGTATCGTGTATGTGGAGTTTGTGA
GCTTTTTGAGATTATCTCAGTGTTTAAGTTTTTTGGGCCAAGGTATAAGT
TTCAAGTGGAGCAGAAAACCGTTCAACCAATTTGAGACATTAGATGATTG
ACTATAAGTTCCTGATGTTATTCGAGATCTTTATATCTAAGGAGAAAAAA
ATAATGCGGTAGTAATTCGTTTTTGACGTTTTATCAGGGTTGCCACGTCT
GTCAGAAATGTCTGGAATTAGGTAAAAGTCTGCAAATGTTTGGAAAAAGT
CTAAAATTGGTATACTTGTTTAGAAAAGTCTGGAATTAATGTACATAGTT
AACTTTCTGGAGATAGGAAACTTTCATTCTGTCAGCATTTGAAATTTCCA
AAAACTGGCCTTTCAAATCACCATTAAAGAAAAACTAAAAACCTTCCGAA
TTGATAAAATGTTTGGGTAATATTGGGTATTTTACCAAAATATCTGAAAC
ATTTTTGACATTTTCATATAAAATATCTTGAAATATGTGGCTTTTGAGAC
TAAAAGTCTGGAATTTCAACTAGGCAAACCTGTAGCAACCTGTTAAAACT
ATTTGACATCAAAAAAGTAAAACATATAGATAAAAATTGAGGGAAAAATA
TTGAGTACTTATTTTGGAATCCTTATAATTTAGAGACTGTGTGGACGGTG
TGTTTAAAAATCTTTACCGGACGTCTCCGAGAATAATTTATACATTGATG
ACGTCACAAGCAAAAGTGAAGAATTGATTTTGCAGAATTATAAAGTTTTA
TATACCATTTAATGCATTTTTAGATCACATCAGTCCAAATGAATAAAAAT
TTGAATATGAAAAATGACGTCATTTTTGAAGAATTTTAAAAGAATCACAA
TCTTAATTTTATTGAGTTAGTCGAGTCGAGCTTTCGAATGGTATAAATCG
TTTTTCGTTTTGACGACGTTCAAATTTGACATTTTCAGGTTACCTCTAAC
CCCCTAAAGAGTTTAGTCATAGCTCTTGAAATCTAGAAGAGCTATGGACC
TTTATAACTTTTCATATTCAAATCTTTACTCACTGAGACTGATGTGATTT
GGAATCTACTTGCCATGTGCTGAAATCAAATTTTAAGTGGTGGTGACGTC
ATCAGCTGACAAAACATTACCGGACGTGTCAGTTGAATATTTTGTCGGAC
GCCGACTAAAATATTTAAGATCAGATGATATACAGGAATGCAAGAAAAAC
CAACTCAGTATTTGTTCCAAACTCATCCAAATTTTAGAAATCATCAGCTG
CCTGTCTGAAAAACGAGCCACTTTTTATAACCATTTGTGAAATAATTTGT
GAGCCAGAGGCGTGTACAAATATCAAAAGGGTTAAAGGCTTGTTTTAATG
ATATACATAGAAAATTCTGGTCTTAAAAGGTGAATTTGTTATCAAATCCG
AAGAAAAAAATATATTGAAGATATTCTACTAACCTTCAAAGGCCAATCTA
CCTTATTGAAAAATAAACGAGATAAGTCAAGAACTAATATCGCCTACAAA
AAATGAATTGAATTTCGTGCTTAGTTTTTAGATTACTAAACTATTTTTCC
CTCTCTAACTCTTCATAACAAGAGCACCTTATTGATCTTTCAAGAAAGGG
AAGATTTTTTCTCCAATCAAATCTTGTTTCAAGACCCAAGAATCAGAAAA
ATAATCCTCTAATCTTTCTTCGATTTTAACTTTTCAAAATATTTTTATCG
AAAAGTTTGTTTTCTCCTCGTGTGAAGAAAGAGTTTCGGACTACCCTCCA
GTTAGATGACTAAAGACATTGTCGAAATTATTTTACGGCCCCATTTTGAC
GTTGTCAAACAATATGACGCTTTATAGCAATGTTTTTCATGGAGATCATA
ACTTTCGTATAACATTTTTGTTTATTATTTCCCTTCAGAGCATCAAGAAT
ATGCAAGTGACGCGGATCAAAGTTCGCGAGTTGTGTCTTCTGTTGTGCCT
TCTTTCGCTATGTCTAATTATGGTGGTGCGTTATCGAGCTCCTGAGGATA
AAAAACAGATCCGAAAGAAGAGAGCGCAACATGTTATTCCACAAGATAAA
CCTGTTCCTCCTCGTTATTCAGGAAAGTTGAACTCGCCGGGCGATCTATT
GATAGACTTAGAGAGGAAAATACTTTTGAAAAATGAAGTTTCGAATGCAA
TTTCGGACAGGGAGGCTGAGAACGAGAAACGGATGTCACAACTAGAGAGT
AAATTATTTCAACGTTTGAATATCATTGAAAGCAAAGTAAACCGAAACGA
AGATCTACTTCTTGAAATTGATCGATTGTTGAAAACGAAATCGAAAGTAA
ACGAACCAAAACCACCGGCAACAAAGATCAAACTCCAAACAAGAGATTTT
TCTATCATGTACGAAATTCATAAAAAGGTTTGGAACAAATTGACTGAAAG
TGAAATCAAAGAATTTTACAACCGTGAAAGAATATCACATTTGAAATATA
ACAAGCGCATTTTAGATATTGAAAGGGATCGACATTTATTGATGGAGCTA
TTTCCAGGACCCGACGAGTCGCGAGACCGAGTCACCGATCAACTTATGGT
CAAAATTAAAGTTAACACAACTAAAACCATTTTCGTCAGTGGTTCTAATG
TGAATAATCAAAAGAAGTTCCAAGCAGACCAGTGCAACGTTGATAAATGT
TTTATAACAAGTAATCCCAAATATGCTTCGGTCGCAGACGCTCTTTATGT
TGAACATAAAATGCCATATCGATTTTTAAGAGAAAAGAATATTAATAAGA
ATCGGGTCAATATGGTTTTCCAGTTAGAATCTTCAAGAAATTACCCATCT
ATATCTATCTTACCCGATGGATTGAACTGGACAGCTTCTTATCGCGTCGA
TAGCGTTCTGTACGCTCCTTATGAACGTTTCACGTCATTTCTAAATGTGA
CTGAGCTACCCACCAAACCTAAAGAGAATTATGCCAAAGGTAAAACAAAG
ATGGCGGCTTGGTATGTTTCGAACTGTGGAGCAGCAAGTGGTCGTAAAAA
TTACGTCAAAGAACTACAGAAATATATTTCAGTGGATATTTACGGACGCT
GTGGTAAACCGTGTCCGAAAAATAACAAAAAATGCTATGACCAATTGAAC
AATGATTACAAATTTTATTTGGCCTTCGAAAATTCAAATTGTAAAGACTA
TTTCACTGAGAAAGTCTATTGGAACGGACTTTTGTAAGTTCAAATTTTTC
GTTTTCTGTGTCGTGATACTTTAGGTGTCTGGTAAACAAGGTCATTGTGG
TTGAGGGCCAGGCCTTTCTTTCTTACAAATAAAAAATTAATGCCGGTACT
GCATTGTACATTAAGGGAAGAAATTTCGGCGGGAAATTAATTTGGCGGAT
GGTGGAAAAAAGTAAATTTGGCGAGAAATTATTGTCGGATTTTGGCCAAA
TCCACCAAATCCGCCAAATTTTCTTTTCGCCGAATTACCTCTTTGGTAAA
GTCCTTAATTAAATTTTAATTATCTTAAATTTTAAATTTTAATTAATGAA
GGGAGTGGTCACAAAGTATCTACTAGGGGGGGTTTGGGCTGGAGGATTTC
AGTTGGGGTTCGAAATTATTTTTGAGGGTTTAGGGGGGGGGTTCCAGAAA
AAAATCCTCAATGGGAAAGGGGGGTGCGAAATATTTTTGGGCAACTTAGG
AGGTCAAATTCCATGACATTATTCGTATTTCGTATTATCGTTAATTCTGT
CTTCATGAAATATCATTGTGATAGCCTCACCATTTCGCGATTTCTATAAT
ATAAGACTAAGAAAGGTAGTTTGTTAAGGGATCCCCCCCTCATACAATTT
CACATGTCAGCATAGTCTAGTCGTTTTAAAAAGAGCTGAAAATACAGTGC
TTTTAGCGAACAAAGTGGTCGAAAATTGCAATTTTTCTCCTGTCGTCGCA
AACCATGGTTGCGCCTCCCGGGGGGGGGGGGGGGCAGCCAGGCAAATTGA
CCGACGGGTATGTGCGGCGGCTAAGGGTCTATTTTTCAAGATAGCAGAAA
TGCACTGTAAGGGTAGACTTTTTGTTATATGCACTGTAAGGGTGGAAATT
TTAGTAAATCAAGGAAAAATTAAGATTTTTTGCCCAAAAAGTCTGATTTT
TTTGCTCTAAAAGGGTTGAAAATTTGAAGAAAATGCACTGTAAGGGTATG
AATTTGACGGAATTTCGCCGACTTTTTGCTGCACTGTAAGGGTGCGATTT
TAAAAGCCAATTTTTTCGCCGCACATACCGTCAGTTGGCAAACCCAGTGC
CCCCCCCCCCGGGTTGCGCCTTCTTAATCTTTGATATTACTCCTGTTATA
TTAAGATATTGTATATGTAAAGAAATAATCTTTACTTTTAAATTCCATAT
GATTCAGACAAAAGCCTCATTTCTGGAAGAATCAGTCCAAAAAAGAGCTA
TGTTTGAGGCATATCAGGAGTCCAGAATCAACATTTCCTTCTGTCGGCGC
AAACCATGGTTGTGCCTCCTTAATCTTTGATAATATTATTACCTTTAAAC
GCAACTCAAAATATTACTCCTATAGTAGTAAGATATTGTATATGCAAAGA
AAAATGTTACATATGATTCAGACATTGAAAGACTCATTTCTGGGCAAAAT
TAATCTCGTCGGCGCAAACCATGGTTGCGCCTCTTTCGTCACTAAATTCT
TTGCCCCTGCACGTTTTAACTTGCTGCCTTTATAATAATGTAGTCCTCCC
CACATGAGTGCACAACATTTTGATATTGAGGCTTATAGGGTTACTCACAG
TCTGGAAATTTACTGTAGTCAAACCCGATTTTATATGTGGCAAGTCGCCC
TTATCCAAAAGTAAGTATAAGTAAGTATAACCCTCACCTTATTAATCAGT
CAGTTAGAGTGAAGAAGAAAAATTTAGCAGGGGGGGGTGCGAAATTTTTT
TAACCTTTTCGAAAAACAGGTTAAGGGTGCGGGTGTGAATTTTTTTTTGG
GATTTTTTGAAATATCCTCAACTCCCCCCCTAGTAGATACTTTCTGACCA
CTCCCTAACTCATTCTTTCTTAGCTGTTTCATACAGGGTTGTATTGTTTA
AATCTATTAAGATTTGTTACTTTTCTTGTAATTTGGCGATGTCAAGGAGT
GTTCCAGATGATAGCTCTGAAATAAATCCCTCTGATAATTTCTTTTCTTT
CATAGTTATCGTATTATCCCAGTTGTGTTTGGAGCTCATCCTGAAGAATA
CAAACGCATTGTCCCTCCACACAGTTACATTCACACTGACCAATTCGCAT
CACCAAAAGAACTGGCGGAATATCTCATCTTTTTAGATCAACATGATGAC
TTATATAATCAATACTTTTTGTGGAAAGACACTGGTAGCTTCATCAACAC
CAAATTCATGTGCCGTATGTGCACCATGGTCCACCTGGCTCCTCATTTCC
CAATGTGGTATAGCGACGCAAACAAGTGGTGGAGGAGTAAAGACAATTGT
GTTGATCCCACCAAAAATGGTGATGGCGTTTCTTACGGAACGTGGCGTAA
CAAACCTCTCCCGAAACAACATTCAAACTTTGTGAAATACGGGTACAAGA
GATACGGCTGA Coding sequence (CDS) from alignment at sc0000330_pilon:204440..210050- >XLOC_045585 ID=XLOC_045585|Name=XLOC_045585|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3468bp|location=Sequence derived from alignment at sc0000330_pilon:204440..210050- (Clytia hemisphaerica_ch_hm2_pilon) CAACGTTTCATTTGGCCGAAGAAAAAGTATCGTCAACGTTTCATTTGGCC GAAGAAAAAGTATCGTAGCATCAAGAATATGCAAGTGACGCGGATCAAAG TTCGCGAGTTGTGTCTTCTGTTGTGCCTTCTTTCGCTATGTCTAATTATG GTGGTGCGTTATCGAGCTCCTGAGGATAAAAAACAGATCCGAAAGAAGAG AGCGCAACATGTTATTCCACAAGATAAACCTGTTCCTCCTCGTTATTCAG GAAAGTTGAACTCGCCGGGCGATCTATTGATAGACTTAGAGAGGAAAATA CTTTTGAAAAATGAAGTTTCGAATGCAATTTCGGACAGGGAGGCTGAGAA CGAGAAACGGATGTCACAACTAGAGAGTAAATTATTTCAACGTTTGAATA TCATTGAAAGCAAAGTAAACCGAAACGAAGATCTACTTCTTGAAATTGAT CGATTGTTGAAAACGAAATCGAAAGTAAACGAACCAAAACCACCGGCAAC AAAGATCAAACTCCAAACAAGAGATTTTTCTATCATGTACGAAATTCATA AAAAGGTTTGGAACAAATTGACTGAAAGTGAAATCAAAGAATTTTACAAC CGTGAAAGAATATCACATTTGAAATATAACAAGCGCATTTTAGATATTGA AAGGGATCGACATTTATTGATGGAGCTATTTCCAGGACCCGACGAGTCGC GAGACCGAGTCACCGATCAACTTATGGTCAAAATTAAAGTTAACACAACT AAAACCATTTTCGTCAGTGGTTCTAATGTGAATAATCAAAAGAAGTTCCA AGCAGACCAGTGCAACGTTGATAAATGTTTTATAACAAGTAATCCCAAAT ATGCTTCGGTCGCAGACGCTCTTTATGTTGAACATAAAATGCCATATCGA TTTTTAAGAGAAAAGAATATTAATAAGAATCGGGTCAATATGGTTTTCCA GTTAGAATCTTCAAGAAATTACCCATCTATATCTATCTTACCCGATGGAT TGAACTGGACAGCTTCTTATCGCGTCGATAGCGTTCTGTACGCTCCTTAT GAACGTTTCACGTCATTTCTAAATGTGACTGAGCTACCCACCAAACCTAA AGAGAATTATGCCAAAGGTAAAACAAAGATGGCGGCTTGGTATGTTTCGA ACTGTGGAGCAGCAAGTGGTCGTAAAAATTACGTCAAAGAACTACAGAAA TATATTTCAGTGGATATTTACGGACGCTGTGGTAAACCGTGTCCGAAAAA TAACAAAAAATGCTATGACCAATTGAACAATGATTACAAATTTTATTTGG CCTTCGAAAATTCAAATTGTAAAGACTATTTCACTGAGAAAGTCTATTGG AACGGACTTTTAGCATCAAGAATATGCAAGTGACGCGGATCAAAGTTCGC GAGTTGTGTCTTCTGTTGTGCCTTCTTTCGCTATGTCTAATTATGGTGGT GCGTTATCGAGCTCCTGAGGATAAAAAACAGATCCGAAAGAAGAGAGCGC AACATGTTATTCCACAAGATAAACCTGTTCCTCCTCGTTATTCAGGAAAG TTGAACTCGCCGGGCGATCTATTGATAGACTTAGAGAGGAAAATACTTTT GAAAAATGAAGTTTCGAATGCAATTTCGGACAGGGAGGCTGAGAACGAGA AACGGATGTCACAACTAGAGAGTAAATTATTTCAACGTTTGAATATCATT GAAAGCAAAGTAAACCGAAACGAAGATCTACTTCTTGAAATTGATCGATT GTTGAAAACGAAATCGAAAGTAAACGAACCAAAACCACCGGCAACAAAGA TCAAACTCCAAACAAGAGATTTTTCTATCATGTACGAAATTCATAAAAAG GTTTGGAACAAATTGACTGAAAGTGAAATCAAAGAATTTTACAACCGTGA AAGAATATCACATTTGAAATATAACAAGCGCATTTTAGATATTGAAAGGG ATCGACATTTATTGATGGAGCTATTTCCAGGACCCGACGAGTCGCGAGAC CGAGTCACCGATCAACTTATGGTCAAAATTAAAGTTAACACAACTAAAAC CATTTTCGTCAGTGGTTCTAATGTGAATAATCAAAAGAAGTTCCAAGCAG ACCAGTGCAACGTTGATAAATGTTTTATAACAAGTAATCCCAAATATGCT TCGGTCGCAGACGCTCTTTATGTTGAACATAAAATGCCATATCGATTTTT AAGAGAAAAGAATATTAATAAGAATCGGGTCAATATGGTTTTCCAGTTAG AATCTTCAAGAAATTACCCATCTATATCTATCTTACCCGATGGATTGAAC TGGACAGCTTCTTATCGCGTCGATAGCGTTCTGTACGCTCCTTATGAACG TTTCACGTCATTTCTAAATGTGACTGAGCTACCCACCAAACCTAAAGAGA ATTATGCCAAAGGTAAAACAAAGATGGCGGCTTGGTATGTTTCGAACTGT GGAGCAGCAAGTGGTCGTAAAAATTACGTCAAAGAACTACAGAAATATAT TTCAGTGGATATTTACGGACGCTGTGGTAAACCGTGTCCGAAAAATAACA AAAAATGCTATGACCAATTGAACAATGATTACAAATTTTATTTGGCCTTC GAAAATTCAAATTGTAAAGACTATTTCACTGAGAAAGTCTATTGGAACGG ACTTTTTTATCGTATTATCCCAGTTGTGTTTGGAGCTCATCCTGAAGAAT ACAAACGCATTGTCCCTCCACACAGTTACATTCACACTGACCAATTCGCA TCACCAAAAGAACTGGCGGAATATCTCATCTTTTTAGATCAACATGATGA CTTATATAATCAATACTTTTTGTGGAAAGACACTGGTAGCTTCATCAACA CCAAATTCATGTGCCGTATGTGCACCATGGTCCACCTGGCTCCTCATTTC CCAATGTGGTATAGCGACGCAAACAAGTGGTGGAGGAGTAAAGACAATTG TGTTGATCCCACCAAAAATGGTGATGGCGTTTCTTACGGAACGTGGCGTA ACAAACCTCTCCCGAAACAACATTCAAACTTTGTGAAATACGGGTACAAG AGATACGGCTGATTATCGTATTATCCCAGTTGTGTTTGGAGCTCATCCTG AAGAATACAAACGCATTGTCCCTCCACACAGTTACATTCACACTGACCAA TTCGCATCACCAAAAGAACTGGCGGAATATCTCATCTTTTTAGATCAACA TGATGACTTATATAATCAATACTTTTTGTGGAAAGACACTGGTAGCTTCA TCAACACCAAATTCATGTGCCGTATGTGCACCATGGTCCACCTGGCTCCT CATTTCCCAATGTGGTATAGCGACGCAAACAAGTGGTGGAGGAGTAAAGA CAATTGTGTTGATCCCACCAAAAATGGTGATGGCGTTTCTTACGGAACGT GGCGTAACAAACCTCTCCCGAAACAACATTCAAACTTTGTGAAATACGGG TACAAGAGATACGGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000330_pilon | genome | sc0000330_pilon:204440..210050 - |
Properties
| Property Name | Value |
| Aaloc | 1330-1734:406 |
| Aaloc | 34-1326:3674 |
| Aaloc | 1-33:5612 |
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