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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:778327..780663- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045580 ID=XLOC_045580|Name=XLOC_045580|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2337bp|location=Sequence derived from alignment at sc0000135_pilon:778327..780663- (Clytia hemisphaerica_ch_hm2_pilon)
TTCAAACTGAAAGACTCCACCGTATTTTCGAAGCTCGACCTAACAAGTGC
ATTCCATCAGCTAGAGCTAGACAAGGACTCAAGATACATTACCACGTTCC
AAACCGAAGACGGGATAAAACGCTTCAAAAGGCTCAATTTTGGTGTAAAC
TCGGCACAAGAGGAACTACAACACGCCCTACGAGAAACAATAAAGGACAT
TAAAGGGACAATGAACTTAATTGATGACATTATCGTTTTCGGGACAACCC
AGGAAGAGCACGATACCGCATTACAGAATCTGTTACAACGTTGCGAAGAT
AAGGGGCTTACGCTCAACCTATCGAAATGCCTTTTCAGCCAAAAAACTTT
AACGTTCTTTGGTTTCGTATTCTCTGACCAAGGAATGCATCCAGACCCAG
CTAAGCTTGACGAGATCAAAAATATGCCAATACCAGAGGATGTCAAAGCA
CTCCAAAGCTTTTTGGGACTTATGAACTACTTTAAACGCTTTATACCACA
GTACAGTACGTTAACTCACCCGCTCCGACAACTATTACGTAAACATGCGT
CGTGGACCTGGACTGATGAGTGCCAGGAAGCTTTCGAAACACTCAGAGAC
AGTCTTTCATCTAAATCGTGCGTCGGGTACTACGATCCGAAAAAAGAAAC
ATCCGTCTACACAGATGCCAGCCCATTTGGAATTTCTGCTGTCATAATAC
AAAACACACCGGGAAGAGAAGATCATAAGCTGATATCGTATTCGTCACGT
GCCCTGAACCCTGCAGAACAGCGCTACTCCCAAATCGAAAGAGAATGCCT
CGGAATCGTATACGCATGTGAACATAATAAACTGTATTTGTACGGTACAC
AATATAAAATGTACTGTGACCACAAACCGATCGTTACTTTATTAAACAAC
CCCAACTCAATAGTACCGCTACGTATTGAGAAAATGACTTTGAGTCTACA
AGGATACACATTCGACTTACAGCATATCGCAGGCAAAGACAACATTGCAG
ACTATCCGAGCAGACACCCTATCGGAAGTCCCATCGAAAACAACAACGAA
ATCGAACAGTACGTCAACTACGTGGCAGAAAACGCATGCCCAAACGCCAT
CTCGCTCGAAGACGTTCGCGAAGAAACAAAAAAGGACCCCGCGTTACAGA
TTGTCGCTGACCTCGTACGAAACAACTCCTGGTACAAACTAGAACAGTTA
CACAACTATCCAGAAATCAAGGAACACGTGCATAAAGTACTGCCTTACAA
AAACATCAAGAATCAACTCACCGTTAACACTGAATCTGATTTGCTACTAA
ATTTGAACAGAATCGTCATACCGGAAACTCTAGAAAACGTGGTCATGCAG
CTAGCCCACATCGGTCATTTAGGCATCACGAAAACCAAAGCACTCTTACG
AACCAAAGTCTACTTCCCAAACATTGACGAAAAAATCGAACGACTTATCA
AATACTGTGCAGCCTGCCAAGTCCAAGCCAAACCAACCCAGCCGGCAAAG
TTATCAGTAACGCCTACGCCAACAGAAGTTTGGGAAACCACCAATCTGGA
TTACCTCGGGCCACTACCAAACGGGAATTACCTTATCGTTCTTATCGATC
AATTGTCAAAATTCCCAGTTGTCGAACCAATACGCTCAACTTCAGCAGAC
CAACTAATCGACTTCTTACAACGAACTATTTCGACATTTGGAATTCCCAA
AACCGTCATTTCCGACAACGGCCCACCATTTAAGTCTTATAAGATTAGGC
AATTCTTTAAAAGACTCCGAATCAAGCATCAACGTATCACACCTTTATGG
CCACAAGCCAACGCCCAAGCAGAAAACTTCATGAAGCCGCTCATGAAGGC
CGTCCGATCAGCCTACTTTGAAAGAACCAACTGGAGAAAGCAACTTCAAA
ACTTTTTATTCACCTACCGAAATACACCTCACTGTACTACAAAGCTCTCA
CCAGCACAAGTCATGTTCCAAAGAGAAACCAGCTTTACCATACCTTCAAT
GAAAAAACGACTCGAAGAGAAAGCAATCAACCAACAGGCACGAGATACGC
AAGAACAAGCCAAACAGCAACGCAAGACATACTTCGATAACCGAACAAAC
GCCAAGGATCACAACATCAAAGTTGGAGATACTGTCATTCTAAAACAACG
AAAGCAAAATAAACTTTCAACAGCTTACGAACCCAGACAGTACAAAGTTA
CAGCAACTAACCACAATATGATAACGGCTACAGATTCGTCCGGGCAATAC
ACCCGCACAAGAAACGTTTCCCATTTCCGACCAACACCGCCACTACATTT
CAAACAAGAAGAGCAGGATCCAGAGGAGATCACTGAA Coding sequence (CDS) from alignment at sc0000135_pilon:778327..780663- >XLOC_045580 ID=XLOC_045580|Name=XLOC_045580|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4674bp|location=Sequence derived from alignment at sc0000135_pilon:778327..780663- (Clytia hemisphaerica_ch_hm2_pilon)
TTCAAACTGAAAGACTCCACCGTATTTTCGAAGCTCGACCTAACAAGTGC
ATTCCATCAGCTAGAGCTAGACAAGGACTCAAGATACATTACCACGTTCC
AAACCGAAGACGGGATAAAACGCTTCAAAAGGCTCAATTTTGGTGTAAAC
TCGGCACAAGAGGAACTACAACACGCCCTACGAGAAACAATAAAGGACAT
TAAAGGGACAATGAACTTAATTGATGACATTATCGTTTTCGGGACAACCC
AGGAAGAGCACGATACCGCATTACAGAATCTGTTACAACGTTGCGAAGAT
AAGGGGCTTACGCTCAACCTATCGAAATGCCTTTTCAGCCAAAAAACTTT
AACGTTCTTTGGTTTCGTATTCTCTGACCAAGGAATGCATCCAGACCCAG
CTAAGCTTGACGAGATCAAAAATATGCCAATACCAGAGGATGTCAAAGCA
CTCCAAAGCTTTTTGGGACTTATGAACTACTTTAAACGCTTTATACCACA
GTACAGTACGTTAACTCACCCGCTCCGACAACTATTACGTAAACATGCGT
CGTGGACCTGGACTGATGAGTGCCAGGAAGCTTTCGAAACACTCAGAGAC
AGTCTTTCATCTAAATCGTGCGTCGGGTACTACGATCCGAAAAAAGAAAC
ATCCGTCTACACAGATGCCAGCCCATTTGGAATTTCTGCTGTCATAATAC
AAAACACACCGGGAAGAGAAGATCATAAGCTGATATCGTATTCGTCACGT
GCCCTGAACCCTGCAGAACAGCGCTACTCCCAAATCGAAAGAGAATGCCT
CGGAATCGTATACGCATGTGAACATAATAAACTGTATTTGTACGGTACAC
AATATAAAATGTACTGTGACCACAAACCGATCGTTACTTTATTAAACAAC
CCCAACTCAATAGTACCGCTACGTATTGAGAAAATGACTTTGAGTCTACA
AGGATACACATTCGACTTACAGCATATCGCAGGCAAAGACAACATTGCAG
ACTATCCGAGCAGACACCCTATCGGAAGTCCCATCGAAAACAACAACGAA
ATCGAACAGTACGTCAACTACGTGGCAGAAAACGCATGCCCAAACGCCAT
CTCGCTCGAAGACGTTCGCGAAGAAACAAAAAAGGACCCCGCGTTACAGA
TTGTCGCTGACCTCGTACGAAACAACTCCTGGTACAAACTAGAACAGTTA
CACAACTATCCAGAAATCAAGGAACACGTGCATAAAGTACTGCCTTACAA
AAACATCAAGAATCAACTCACCGTTAACACTGAATCTGATTTGCTACTAA
ATTTGAACAGAATCGTCATACCGGAAACTCTAGAAAACGTGGTCATGCAG
CTAGCCCACATCGGTCATTTAGGCATCACGAAAACCAAAGCACTCTTACG
AACCAAAGTCTACTTCCCAAACATTGACGAAAAAATCGAACGACTTATCA
AATACTGTGCAGCCTGCCAAGTCCAAGCCAAACCAACCCAGCCGGCAAAG
TTATCAGTAACGCCTACGCCAACAGAAGTTTGGGAAACCACCAATCTGGA
TTACCTCGGGCCACTACCAAACGGGAATTACCTTATCGTTCTTATCGATC
AATTGTCAAAATTCCCAGTTGTCGAACCAATACGCTCAACTTCAGCAGAC
CAACTAATCGACTTCTTACAACGAACTATTTCGACATTTGGAATTCCCAA
AACCGTCATTTCCGACAACGGCCCACCATTTAAGTCTTATAAGATTAGGC
AATTCTTTAAAAGACTCCGAATCAAGCATCAACGTATCACACCTTTATGG
CCACAAGCCAACGCCCAAGCAGAAAACTTCATGAAGCCGCTCATGAAGGC
CGTCCGATCAGCCTACTTTGAAAGAACCAACTGGAGAAAGCAACTTCAAA
ACTTTTTATTCACCTACCGAAATACACCTCACTGTACTACAAAGCTCTCA
CCAGCACAAGTCATGTTCCAAAGAGAAACCAGCTTTACCATACCTTCAAT
GAAAAAACGACTCGAAGAGAAAGCAATCAACCAACAGGCACGAGATACGC
AAGAACAAGCCAAACAGCAACGCAAGACATACTTCGATAACCGAACAAAC
GCCAAGGATCACAACATCAAAGTTGGAGATACTGTCATTCTAAAACAACG
AAAGCAAAATAAACTTTCAACAGCTTACGAACCCAGACAGTACAAAGTTA
CAGCAACTAACCACAATATGATAACGGCTACAGATTCGTCCGGGCAATAC
ACCCGCACAAGAAACGTTTCCCATTTCCGACCAACACCGCCACTACATTT
CAAACAAGAAGAGCAGGATCCAGAGGAGATCACTGAATTCAAACTGAAAG
ACTCCACCGTATTTTCGAAGCTCGACCTAACAAGTGCATTCCATCAGCTA
GAGCTAGACAAGGACTCAAGATACATTACCACGTTCCAAACCGAAGACGG
GATAAAACGCTTCAAAAGGCTCAATTTTGGTGTAAACTCGGCACAAGAGG
AACTACAACACGCCCTACGAGAAACAATAAAGGACATTAAAGGGACAATG
AACTTAATTGATGACATTATCGTTTTCGGGACAACCCAGGAAGAGCACGA
TACCGCATTACAGAATCTGTTACAACGTTGCGAAGATAAGGGGCTTACGC
TCAACCTATCGAAATGCCTTTTCAGCCAAAAAACTTTAACGTTCTTTGGT
TTCGTATTCTCTGACCAAGGAATGCATCCAGACCCAGCTAAGCTTGACGA
GATCAAAAATATGCCAATACCAGAGGATGTCAAAGCACTCCAAAGCTTTT
TGGGACTTATGAACTACTTTAAACGCTTTATACCACAGTACAGTACGTTA
ACTCACCCGCTCCGACAACTATTACGTAAACATGCGTCGTGGACCTGGAC
TGATGAGTGCCAGGAAGCTTTCGAAACACTCAGAGACAGTCTTTCATCTA
AATCGTGCGTCGGGTACTACGATCCGAAAAAAGAAACATCCGTCTACACA
GATGCCAGCCCATTTGGAATTTCTGCTGTCATAATACAAAACACACCGGG
AAGAGAAGATCATAAGCTGATATCGTATTCGTCACGTGCCCTGAACCCTG
CAGAACAGCGCTACTCCCAAATCGAAAGAGAATGCCTCGGAATCGTATAC
GCATGTGAACATAATAAACTGTATTTGTACGGTACACAATATAAAATGTA
CTGTGACCACAAACCGATCGTTACTTTATTAAACAACCCCAACTCAATAG
TACCGCTACGTATTGAGAAAATGACTTTGAGTCTACAAGGATACACATTC
GACTTACAGCATATCGCAGGCAAAGACAACATTGCAGACTATCCGAGCAG
ACACCCTATCGGAAGTCCCATCGAAAACAACAACGAAATCGAACAGTACG
TCAACTACGTGGCAGAAAACGCATGCCCAAACGCCATCTCGCTCGAAGAC
GTTCGCGAAGAAACAAAAAAGGACCCCGCGTTACAGATTGTCGCTGACCT
CGTACGAAACAACTCCTGGTACAAACTAGAACAGTTACACAACTATCCAG
AAATCAAGGAACACGTGCATAAAGTACTGCCTTACAAAAACATCAAGAAT
CAACTCACCGTTAACACTGAATCTGATTTGCTACTAAATTTGAACAGAAT
CGTCATACCGGAAACTCTAGAAAACGTGGTCATGCAGCTAGCCCACATCG
GTCATTTAGGCATCACGAAAACCAAAGCACTCTTACGAACCAAAGTCTAC
TTCCCAAACATTGACGAAAAAATCGAACGACTTATCAAATACTGTGCAGC
CTGCCAAGTCCAAGCCAAACCAACCCAGCCGGCAAAGTTATCAGTAACGC
CTACGCCAACAGAAGTTTGGGAAACCACCAATCTGGATTACCTCGGGCCA
CTACCAAACGGGAATTACCTTATCGTTCTTATCGATCAATTGTCAAAATT
CCCAGTTGTCGAACCAATACGCTCAACTTCAGCAGACCAACTAATCGACT
TCTTACAACGAACTATTTCGACATTTGGAATTCCCAAAACCGTCATTTCC
GACAACGGCCCACCATTTAAGTCTTATAAGATTAGGCAATTCTTTAAAAG
ACTCCGAATCAAGCATCAACGTATCACACCTTTATGGCCACAAGCCAACG
CCCAAGCAGAAAACTTCATGAAGCCGCTCATGAAGGCCGTCCGATCAGCC
TACTTTGAAAGAACCAACTGGAGAAAGCAACTTCAAAACTTTTTATTCAC
CTACCGAAATACACCTCACTGTACTACAAAGCTCTCACCAGCACAAGTCA
TGTTCCAAAGAGAAACCAGCTTTACCATACCTTCAATGAAAAAACGACTC
GAAGAGAAAGCAATCAACCAACAGGCACGAGATACGCAAGAACAAGCCAA
ACAGCAACGCAAGACATACTTCGATAACCGAACAAACGCCAAGGATCACA
ACATCAAAGTTGGAGATACTGTCATTCTAAAACAACGAAAGCAAAATAAA
CTTTCAACAGCTTACGAACCCAGACAGTACAAAGTTACAGCAACTAACCA
CAATATGATAACGGCTACAGATTCGTCCGGGCAATACACCCGCACAAGAA
ACGTTTCCCATTTCCGACCAACACCGCCACTACATTTCAAACAAGAAGAG
CAGGATCCAGAGGAGATCACTGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:778327..780663 - |
Properties
| Property Name | Value |
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| Aaloc | 1-2337:2338 |
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