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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000278_pilon:127042..129608- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045555 ID=XLOC_045555|Name=XLOC_045555|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2567bp|location=Sequence derived from alignment at sc0000278_pilon:127042..129608- (Clytia hemisphaerica_ch_hm2_pilon)
GGAACTCTATGTGGACAATGTACACCCGGCTATCACCAGAGCTATTTCTC
AACAAATTGTATCGAAAATTCAAAATGCAGTACAAAGAATCAAAGAAAAT
TTTGGACAGTTTATGTATTTACAGCGTTCCTTTTGACTTGTGTTATTTTG
AGTACCAAAGATTTTGCAGTTGTTTTAGTAGCCTTTGTCGCACAGGTAAG
AAACATTGAATTTGCTTTGAGTTAGCCTGTAGAAGTAAGGTTTAGATTAT
GATCTGGACTTACCCACGCATTACGAACTTTGTACATTAAGTGGAACTTG
AATTTATTAAATCGCTCTTTTTACTTACTATCTAAATTATAAAACATTAT
GATTTGCTTATCGATACAGTTAAAAGTCTTTAAAAACTTGGGATCTTTTA
GGGTTAAGCAAAGTTGTAGCTGTACTATTTGAGAATATACCATCTTTGAA
GTCAAAGCTGTTTGTAAAAACTGGTCCATTTTTCCTGTTTGAATAGAAGA
GAAGTGTAATGATGATTCGAATTCTATGTGTTTCAGGTCCGAAACCTCTT
CAAATGTTTGAAGATCAAACTCTTTGGCAATAAAGACGAGAATATTTCAC
GTATCAACTCCTGTATATCTTATAACAACATTCGAATCAAAAACAAATGT
CTGATAAAAGAAGAAAAACCACGTCAATACATTTTTTCGGCAGTCCTTCA
AATTACCCTATCATTTTTCCAGATAGTAAGCTTACTATCAATAAGGAACG
ACTCAGATACAAACAAAATGATGACCCGAATGGTCAATCTTTTTAATTTA
CAACTGGCTGTCAAACAAGCAGAAGAATTTTGCCCATTTGAAGGAATCGA
GATTATTTGGACAAACTTTTTAAAGAATGTTTTGTTTATTCTTTTGATGT
TGTTGTTTTTGGTCATCTTCAGCTTGATTCATAACTTAATCTGTTTCTTG
TTTTGTGGAAAGAAAGCCGGACCGGAATATCAACAAAATAGCACAGATAC
CGAAAAATGTAAGTATAGTTCCCCTGATATCTGTAGATCTCCACCACGTT
ATACGCGAGATACACTCTGGTACAGAATAGCGAATTCTTAGCAAGCTAAG
TGCATTGATTAACATTAATATGCACTTGAGGGGGCAAACTGAATATTCAA
ACCGTCAAATCGTATTTTTTGTGCTTTGGACCAGCGAAATTTTTCAATAA
TAAGATGCTTGTACTTTAAATGTAAAGTTGCTCGTTGGTCATTTTCTAAC
ATATGGATTTGACCATTTTTTGACCATTTTTTCTCCAGTATTTACTATTA
ACAATCATGGTCATAATATTTGAGAAAAAAGGGAAATTCCCCAGGAAGTT
TTGAAACCACAATCGATCTGTAAGCGCTCTAAAGTAGGTTCGAAGGGTAG
AGTTTTAAATCCGAGTTTTAATGCTAGACTTAAGACTTAAGATCTGAGGA
TCCAAAAGTTTAAAAATAATCCAATAAGACTCAGAATGTAGCCTGGAAGT
CTGCCAACCCATCCCAAATTGAAATATTCGATCAAATTAAAAAAAATCGA
CTTTCTCGTCGGAACTTTAAATCTTGAAAAATGTTAAAATAACCGGAATT
CTCAATATATTTCGATGTAGATGATGACGAAAACCGAAACACAAACGAAA
GGGTCATCAAGGAGGCGATCACCAAAACATACAAACCAAGCCTTTTCCAA
GAACTTCTTCAAATATCATTCACCGACAAACTCATCTTAACCTTCATCAA
AATCTTAATGTTTGGTTACAAAAACATATCTTTATTCACAATCGTTTCTT
TGAATTGTGTAAAAATTTATGGTGAACCTGTCCTCTATATCTCTGGTAAT
ATCAAATGCTACCAACCTTGGCAATGGAGTCTATTAGCACTCCTTATCTT
ATGGGTAGTCCCATTCCCAGTAGCGTTAGTCTTGGCATACCGACTTTACC
AGAAAGGTATTATTTCTAAGATCGAATATATCACCATCCTAATATTCCCA
ATATTAGCATTTGGGTTGTATTTTTATCACCATGGAACGCGTAGCCGGAC
CTTAGGCCCCTGTCAGGAAGGGCTTCTTGGTGCCTTATCAGATATCTTTG
AAGAACCATATCGAGTGACTCAAACAGCGACAGAAGATTGCGAAATCGAA
GAGGAAACACTCTACTGGTGGACAGCATGGAGGCTTTACGAACGGCTCTT
GATTGCCGTGTTGGTAACATTTATTATTGAGCCGTTATTCAGAATGTGTG
TTATAGCACCGGTAATTGCGTTCCTATCCATACTCCATTACCAGATCAAA
CCGTATAAAGAAACAATGACTTTATTATCGTTGCTTGATATTTCGTCGTA
CGTTTTCTTGACGTTTTACGTCGTTGATAACATGTTCCGATCGTTTGCAT
ACACGTTCGATTTACCGTTGCAGAATCCTATTGACCGTGGTTTGAAACTT
TTGGGCGTTTTTGAAGCGTTGTTGACACCATTGACTGTGATTTGTTTATT
TGTTATTGCTTCAATAGCTCGAGCCGTGTATGAAATTGTTCGAAATACGG
CCAAAAAATGCGAATGA Coding sequence (CDS) from alignment at sc0000278_pilon:127042..129608- >XLOC_045555 ID=XLOC_045555|Name=XLOC_045555|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3228bp|location=Sequence derived from alignment at sc0000278_pilon:127042..129608- (Clytia hemisphaerica_ch_hm2_pilon)
GGAACTCTATGTGGACAATGTACACCCGGCTATCACCAGAGCTATTTCTC
AACAAATTGTATCGAAAATTCAAAATGCAGTACAAAGAATCAAAGAAAAT
TTTGGACAGTTTATGTATTTACAGCGTTCCTTTTGACTTGTGTTATTTTG
AGTACCAAAGATTTTGCAGTTGTTTTAGTAGCCTTTGTCGCACAGGGAAC
TCTATGTGGACAATGTACACCCGGCTATCACCAGAGCTATTTCTCAACAA
ATTGTATCGAAAATTCAAAATGCAGTACAAAGAATCAAAGAAAATTTTGG
ACAGTTTATGTATTTACAGCGTTCCTTTTGACTTGTGTTATTTTGAGTAC
CAAAGATTTTGCAGTTGTTTTAGTAGCCTTTGTCGCACAGGTCCGAAACC
TCTTCAAATGTTTGAAGATCAAACTCTTTGGCAATAAAGACGAGAATATT
TCACGTATCAACTCCTGTATATCTTATAACAACATTCGAATCAAAAACAA
ATGTCTGATAAAAGAAGAAAAACCACGTCAATACATTTTTTCGGCAGTCC
TTCAAATTACCCTATCATTTTTCCAGATAGTAAGCTTACTATCAATAAGG
AACGACTCAGATACAAACAAAATGATGACCCGAATGGTCAATCTTTTTAA
TTTACAACTGGCTGTCAAACAAGCAGAAGAATTTTGCCCATTTGAAGGAA
TCGAGATTATTTGGACAAACTTTTTAAAGAATGTTTTGTTTATTCTTTTG
ATGTTGTTGTTTTTGGTCATCTTCAGCTTGATTCATAACTTAATCTGTTT
CTTGTTTTGTGGAAAGAAAGCCGGACCGGAATATCAACAAAATAGCACAG
ATACCGAAAAATGTCCGAAACCTCTTCAAATGTTTGAAGATCAAACTCTT
TGGCAATAAAGACGAGAATATTTCACGTATCAACTCCTGTATATCTTATA
ACAACATTCGAATCAAAAACAAATGTCTGATAAAAGAAGAAAAACCACGT
CAATACATTTTTTCGGCAGTCCTTCAAATTACCCTATCATTTTTCCAGAT
AGTAAGCTTACTATCAATAAGGAACGACTCAGATACAAACAAAATGATGA
CCCGAATGGTCAATCTTTTTAATTTACAACTGGCTGTCAAACAAGCAGAA
GAATTTTGCCCATTTGAAGGAATCGAGATTATTTGGACAAACTTTTTAAA
GAATGTTTTGTTTATTCTTTTGATGTTGTTGTTTTTGGTCATCTTCAGCT
TGATTCATAACTTAATCTGTTTCTTGTTTTGTGGAAAGAAAGCCGGACCG
GAATATCAACAAAATAGCACAGATACCGAAAAATATGATGACGAAAACCG
AAACACAAACGAAAGGGTCATCAAGGAGGCGATCACCAAAACATACAAAC
CAAGCCTTTTCCAAGAACTTCTTCAAATATCATTCACCGACAAACTCATC
TTAACCTTCATCAAAATCTTAATGTTTGGTTACAAAAACATATCTTTATT
CACAATCGTTTCTTTGAATTGTGTAAAAATTTATGGTGAACCTGTCCTCT
ATATCTCTGGTAATATCAAATGCTACCAACCTTGGCAATGGAGTCTATTA
GCACTCCTTATCTTATGGGTAGTCCCATTCCCAGTAGCGTTAGTCTTGGC
ATACCGACTTTACCAGAAAGGTATTATTTCTAAGATCGAATATATCACCA
TCCTAATATTCCCAATATTAGCATTTGGGTTGTATTTTTATCACCATGGA
ACGCGTAGCCGGACCTTAGGCCCCTGTCAGGAAGGGCTTCTTGGTGCCTT
ATCAGATATCTTTGAAGAACCATATCGAGTGACTCAAACAGCGACAGAAG
ATTGCGAAATCGAAGAGGAAACACTCTACTGGTGGACAGCATGGAGGCTT
TACGAACGGCTCTTGATTGCCGTGTTGGTAACATTTATTATTGAGCCGTT
ATTCAGAATGTGTGTTATAGCACCGGTAATTGCGTTCCTATCCATACTCC
ATTACCAGATCAAACCGTATAAAGAAACAATGACTTTATTATCGTTGCTT
GATATTTCGTCGTACGTTTTCTTGACGTTTTACGTCGTTGATAACATGTT
CCGATCGTTTGCATACACGTTCGATTTACCGTTGCAGAATCCTATTGACC
GTGGTTTGAAACTTTTGGGCGTTTTTGAAGCGTTGTTGACACCATTGACT
GTGATTTGTTTATTTGTTATTGCTTCAATAGCTCGAGCCGTGTATGAAAT
TGTTCGAAATACGGCCAAAAAATGCGAATGAATGATGACGAAAACCGAAA
CACAAACGAAAGGGTCATCAAGGAGGCGATCACCAAAACATACAAACCAA
GCCTTTTCCAAGAACTTCTTCAAATATCATTCACCGACAAACTCATCTTA
ACCTTCATCAAAATCTTAATGTTTGGTTACAAAAACATATCTTTATTCAC
AATCGTTTCTTTGAATTGTGTAAAAATTTATGGTGAACCTGTCCTCTATA
TCTCTGGTAATATCAAATGCTACCAACCTTGGCAATGGAGTCTATTAGCA
CTCCTTATCTTATGGGTAGTCCCATTCCCAGTAGCGTTAGTCTTGGCATA
CCGACTTTACCAGAAAGGTATTATTTCTAAGATCGAATATATCACCATCC
TAATATTCCCAATATTAGCATTTGGGTTGTATTTTTATCACCATGGAACG
CGTAGCCGGACCTTAGGCCCCTGTCAGGAAGGGCTTCTTGGTGCCTTATC
AGATATCTTTGAAGAACCATATCGAGTGACTCAAACAGCGACAGAAGATT
GCGAAATCGAAGAGGAAACACTCTACTGGTGGACAGCATGGAGGCTTTAC
GAACGGCTCTTGATTGCCGTGTTGGTAACATTTATTATTGAGCCGTTATT
CAGAATGTGTGTTATAGCACCGGTAATTGCGTTCCTATCCATACTCCATT
ACCAGATCAAACCGTATAAAGAAACAATGACTTTATTATCGTTGCTTGAT
ATTTCGTCGTACGTTTTCTTGACGTTTTACGTCGTTGATAACATGTTCCG
ATCGTTTGCATACACGTTCGATTTACCGTTGCAGAATCCTATTGACCGTG
GTTTGAAACTTTTGGGCGTTTTTGAAGCGTTGTTGACACCATTGACTGTG
ATTTGTTTATTTGTTATTGCTTCAATAGCTCGAGCCGTGTATGAAATTGT
TCGAAATACGGCCAAAAAATGCGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000278_pilon | genome | sc0000278_pilon:127042..129608 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 670-1614:946 |
| Aaloc | 196-666:2032 |
| Aaloc | 1-195:2568 |
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