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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000359_pilon:6070..13366- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045550 ID=XLOC_045550|Name=XLOC_045550|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7297bp|location=Sequence derived from alignment at sc0000359_pilon:6070..13366- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGCATTTCAAAGGCAGACAAGATTGAGGTGAAAACTAAGTCATTGTA
TAATGGTCGGAAACGCAGTATCCAGTCGTTCTCTTCTCAAGTTCATAAGC
TTGGTAAGAACTAAATCATTTTTTGAGTTTCATTATTTCAGTAAAACTCC
CTGATATTGAATATCTCAAATTTAAGAACCCAAGACCTCGAGAGGGAAAA
TATAAGCATATTGTAAGAACATTACATAAGGCTTTGCTCTAAATTATCTG
ATTTCTTAGGGAATTGCTTCAAACCACTCGAAAATACTTAATTACTCTAG
CAACGTTATTTGCAAACGAGGGCTGTAATGCTTTTATGCATCTCGAGAAG
AGTGAATTTGTTTAAATAAACAAAAAGTATGTAGAATTTGGAATATACAT
CGAAAAATAGCTTTGAGCATAAAGTTCAAAATACCTTTTGGTGTTCAGAC
TTTGGCGGGCAGAGAGAGAGAGCTTTGATTTTTTTCTAAACTTTATGCCA
CACCTATTTCTCTCTATTCGAAGCTTTCTACTGACTCACTAGACAGACCT
CATTAATCTTGCACAAAGAGCAGAAAAATCTCAATTACAAAGAAAAAATG
TAGTTTTGTTTATTTATTTTTTCTGGTGTTCTAATTTTCAGACCTATTGT
TAAAAAATCTGTCTGAAAAGACAGGAAAATATTTTTCTGTGCAGGGTTCG
AATTATAGCTTCGCACTTCGCAAATTGCGAAGCAATTTCAGGTTTTGGCG
AAGAAAAAAGTTTTTTGAGATAAAAATTGCGAAGCAAAAATTTTTAAGCG
AAACTTAAAAATTGAAAGGCAAAGAGAAAAAAGAATCTAACACAGTCTGT
ATATGTAATTTAATGAGTGGGATCACACGCCTGAATAAACACTTTTTTAA
AGTCTTTCTATATTCACTTCATTATGTTTATCAAAAAAACATAATCTCTT
TCTAGTACATAAAAATTACTTTTGTTTGCTGAAAGCTTAGTTATAAATAA
ACCTATGAATGTTTTTGATAAACAATTAATAATACACTTATTGTATGCCC
CAGACTTTCTTTTTTGGTAGCAGACATGATATATGATAGAAGATGAAATA
ATCTTTTTCACATTCACACTTTTTAAATTAAACAGGTGTACCAGGAAGAA
AATTGTCACGCAATGTTCTAGTTGTTTCACAATCTTTATGATGTAATAAT
ATTTTTTCAATAGCTTTTTTGTTCGTTATGTATTATATTATATATTAGAA
CAGAAAGAGTGCGGTCACACCAAATGATTTACCTCCGCTTATATAGCTGT
TGTCATAACAACAAATATTTTTATCTATTTTTTGATGTGACCACTCGAAA
AAATGGAAGAAAAAATCCTGAATTCGAGGAATCACCTGTTTTAATAAGCG
AAAGATAAGACTTGCTCGATAGCAAGTCTTATCGTAGTTTAAGAAGAATT
CCTTTATGTTTAAATAAATAGGTCTATTGAAAATGGCGATTTGTGTTTAC
TTTTCAAATTTTGAAAATTTTAAAAAGATGTGCACATATTTTTTTGCACA
CGCCATTACCATCCACACACAAGAGAAAAACAGAGTTGTGTCGAGGCTTT
TTATTTCGAATGAATGAATGAATGAATTTTTATCCACACAAATCTTTAGA
CTTATTAGAAATGTTGATTGAAGTTTTCCGACGCGCCGCTTAAAATAAGC
AAAAATGGTGATTCCTTTTTAGCATTAACTAAACTTATATTTTGGTGTGA
CCGCGCTCAAAGAGAGCAAAGATAACCTACAAATAGAATTGACGTCATAA
ATGAAAATTTGAATAAAGTAAATAGCAAAAAGTTTTTTCATGTATTTCAT
TTGTTTTATTCAAAGCTATTGAAGCTCACTATTGCGTCATTTTTAGCTTA
AATGGAGTGGTTAATTTCACTCTTCGTTCATTTTCATACCAACATGGCTT
CGTTAACAACTGTAAATAAGTGGCAAAGTTCTCTAAAATGCAAGCTAGAT
ATATTGGAGATTGTCGATGGAAAGGTCAGAAAAATGAAGTGTATTGTTTG
CTCTCAGTTTTCTGACAAGATTAAAGGAATGGAAGGATTCAGTCAGGCTT
GGGTAGACGGTACAGAATCTATAAAGAAAGATAGTTTGGATAAACACATC
AAAGGAGAGCCTCATAAACATGCAAAGGACCTTTCATTGAAAGTTTATAA
CATCTTTATAAAATCTTATAACAAGGAAATTGTTTCAAAAACACCGATTG
GTAAAGGTTTAACAAAAATGCAAGAAGAAGATGAAAAGGTAATAAGTTTT
TGTCATAATTTTGATTAACTACATAATCTGTATACTGTGTTTTCTCTTCT
TTTGCAATGTATGTAATGATTAAATCATGAAAATTTAGTCCTTCTAAAAA
TTAATTACCCAGCTGGCACACAACGTTGTTTCAACGTACATCTAACGTTC
ATAACGTCCATAAAACGTTATATGAACGTTAAAACGTTATATGAACGTTA
AATCAGTTATATGAACGTTAAAACAACGTTTTGTGCCAGCTGGAGAGTTG
CGTTTTATTTTAAAGCTCAAATGCTAATTTTCTAACATACTTAGACAAAC
CTTTTTCAGTCAGTAAACAAAACTTATAAATGTCTTAAGTTTTTAAATTG
AAGAGGGGTGTCTAGAAAAAAGTTTTTAATTGGTTTCACATGATTTTTGT
ATAGTTTTGAAGAGTAGTATTTCGAATAGAGAATGGAGTGAAAAAAATAG
AATCCCCCCTGTATTTATAATTTCAGATCCTGCGCACCAGATTCAACACA
GCATACTATCTATGCAAAAAGGAACGACCGTACAGTGACTTTTCAGATCT
ACTGAGTTTGGAGGAGAAGAACGGTATGAAAAAGAGTCACAGTTACAGGA
ATGACAGAGCTGCTGCTCAATTTATCGATACGGTTGGTAAGGAGATGAAA
GATTCTTTTGTGAATGATCTTTTGAATGCCAACTACTATTCAGTATTAAC
CGATGGGAGTACCGATGCAAGCATCACAGAACAAGAGGTAGTATATGTTC
TCTATCTATCTGGTGGTGAGCCAAAAGTTAAGTTCTTAGGAATAGAGGCT
CCGGATCAAGCAACTGCTGATGGATTGAAAGAAAATATTGAAAAGGCTTT
TCACAATATCGGGATAACTCCTATGTATGATTCCCTTGCCAATCTGTGTG
TTGATGGAGCTTCTGTTAATACAGGCATCCATAATGGTCTTGGTGCTAAG
ATGCAAGTTCATGCACAATGGCTAACCATTATCCATTGTTTTAACCATAA
TCTGGAGCTAGCCGTTAAAGACTGCTTTGATGAGACATTTTTTAAAGAAA
TCGACAACATGCTCCTCAAATTATTTTACTTATATCGTAAAAGCCCGAAA
CGGCTACGTGAACTCAAAAAGTTTGAGGAAATTTATGATGAATCGATTCC
AAAACCATACAAATCGTATGGAACAAGATGGATTGCCCACAAGATCAAAG
CTATGGAGATTGTTTTAAACAACTATGGTGTATACATCCAACATTTAGAA
TCGTTAGCACAAACAGACAGTCAGGCTTTGAAGCGGGCTGAAATACAAGG
AGAAGTGAAAAAATGGAAAAATGCAAAGTTTCCCATACACTTAGCAATGT
ACATTGATGTTCTAACGCCACTTCAGTTTAGGTTTCCAGAAGGAAAAACA
TGACCCTGTGCTTGCTGTCCGTCGAATTAAAGAGTTCAATTGGACAATGG
CCAAACTACAAATTCTTGTTGACTCATCGTTAGAGGATGGTAACAATGAC
CGTCTGATTCACATCACCAAACTATTCAAGGAAGTTGCTGATGATGGAAA
CTATCAAGGAGTAAAGTTATCAAATTTTACAGTCCATCAGAAATCGATCA
GTGAGTCATTTGAAGAAATTATTACGAAGCTAGCGATCACAATGGAAAAT
CGATTTTCAAACATGATGGCATCACCGGTTTTCGAAAACCTCGTGACTAT
CCTTGACGTATCATTATGGCCTGAGGAGGATAAAGGGCTGTTAGACTATG
GTGACGAAAGTGTGAATGCCTTAGTCGATCATTTTCGCTCTCTTATTGAG
AAAAAGTGCAATGTTTCTCAAATTTCGTCAGAATGGGATAGACTAAAGCT
TTCCCTTTCACCCAAATTGAAGGCAGGAGAGAAGGATTATCTTAAGGTTT
GGAAAGAAGTTTTTTCGAATAAGGGGCTTCAAGACGAATGTAAAAACGTC
TTACATATCATAGAAATTCTTCTCATTACCCCGTTTACAAATGCCAAAAT
TGAAAGAGTTTTCAGCAGAATGAATAGACTGAAAACAGATTCCAGAAATC
GCTTGGGTCAGGCTAGATTGGAAACACAAATGCGCGTGGGAGAAGAAGGT
GTCTCAATCGACGAATTTGAGCCCGACCTTTATATCAATAAATGGTTTCA
GGAAAAGGTTCGCAGGATAAACGGGGCAAAACCAAGAGATTATCCGTCAA
AGCGTCGCTCTGTTAAATCTAAAAGTGGATATTCTGTCATTGATATTGCT
CAGGTTACCCTATCTGACCTGGAGAACAGTGATGATGAATTTGAACAGTT
TGATTGAGACATTTTGACTTTCAGTCACATGATGATAAACAAGACTTACA
ACTTACTACCACTTTAGCATTCGATTTTATTACTTTTTACTTTCTAGGTT
ATTCAGTTATTTTCTACAAGAATATGGTTCTATAATATATAATATAATTT
TACTACACAAATTTCCGTTCTCGTAGAGATTTCTCGAGACAGTACAGTAT
ATGGCCCCCAAAACGGAGGCGGCCCCCAAAACGGAGGTTTTCATTAAAAT
TAAGATTCTGACTTGTAGATTTATCAGAATTAAACGATTTTTGTTTATTT
TGAAAGAATGATGGTTATACTTAAAAATGAGCATGTTTTTGCTGGTTTGA
GACAGATTCAAAATAACATATTTGCGTCTAAAGGAAATATTTTAACACCA
AAATTAGACAAAAATTGCATATAACTCACTCTAGCTCCTTGGATATTGAA
AATAAGTTATGAAAACGGGGTATAGGAAACTTTCTACACCTAATGCCGCT
CAGAAAATGCAAATACATCTGTTACTTTAGAGGCTGGGTAAAAGATATAG
CATCTTGAAGGTCAACCAGTATTTTGGAGCCCAGAATCAGCATTGACAAA
ACCGAAAATTCTAAATATGAGAAAAAGAAAAAAGTCTTGGAATTCTATTC
CTATCACCTTGAGTTAGTAGTTTATAACAAAAAATTAACATTATATATAA
TTTTTTTCGCTGAATCAGCAAAAACGGCAAATTCTGTCATTTTTTTGCAA
AATATAGGAGAAAAATATCTTTAAAGCTTAATATTTTCAGTTTCAGTTAT
GCTTTTTTTCTAAAATTTTCACAACTTTTTCCATACATGAATGGAACTAT
TTTCAAAAGAGATTTGTTTTCAAAAACTTAATAAAGACGTTGTTAAATCA
AAATTGTCATTTTGAAAATTTCTAAATTTTCAGTTTGGACTTTGCAATAT
CGAAAATCTTGAAATATTTCATAAAAATCATAAATTTTACATCCATCGGG
TCGTAAATTTAAGGGAAAACACAAATATGCTCATAGTTTTCCCCCCTATT
ACAACTGGGCTTAATAATTTGATTTTAACTATACCTCCGTTTTGGGTGCC
CCAAACCTGCATTTTGACAACCAGGGGTATACTGTAAAAATTTTATCAAA
TAAGTTTATGCCCAAAACCCTCTAAATCATATTTCAAAACTATGGTCAAA
ATTTTGTATTCATATCTTAAAGATATCTTGAGAAATCGCCAAAATTTCAA
ACCTCCGTTTTGGGGGCCATTAGAAAAAAGCTACCTATTTTTAAGCGATT
GAAAAATATTGTTGAAATTGAAAATTTTGAAAAAGAACTTCTAGGAAATA
AAGTAGAGATGTTAAAGGTTTTCATGCAGCAAACATTTTTGTAAAATCTC
TTTTCCTCTAGATTTGAGAGAAATTTCAAATTTGATCGCCGTTTTGGGGG
CCACATACTGTAGAGACATAAATTTATTATTGTTTTGAACACAAAATTCC
AAAAGAGGCATACAAATTTCTAAATTCTATCTACTTCACATTTATGTTGT
AGATAGAACAATAGATCGTAAATATAGATCGCATTTAATCGCAAATTACA
TCGCAAAACTCCAAAAGTGCTTCGCAAACATCTAAAAATTTTCACCTGCG
GCGCTATCCCGCTCGCTTCGCTCGCATTTTTTTAGCGAAGCTCCTCAAAT
TTATAATTCGAACCCTGCTGTGTATCTCGTGAAAGAGTGTATTTCCTTTT
ATCCTGACCTAATAATAGGCCGATCAAAGAGCGAGAAAATGAATGAAATC
TCTGTGAATAGCGGGAAACTTAAGAGGGAAAGAGCAAATTTTCATAATTT
AACCTTTTTCTTAAGTAATCCTTTTTTCCTTTTTTCAAAAGGTATAGCAA
GTCTGAAGGCAATATTGTTCCACCATAACCTTCCAACACGTGGTACAAAG
GACGAGATTGTGCTCAACGTTTGCCTTCTTAAGGAGGATTCGAGAGCACT
GTATCAGCAAAAACTACGTTTCTTCTCTCCTCGAGCTAATAAAAAAGACC
AGCACTCTCATTTGTCGGCAGAGACATTCTTGTGCAGTCCGTTCCAGAAA
GAGCCGAAAGTTTGCCACACCACAGGTAGGGACCGCAATAACTTTTTAAA
ATCTTTTTAGCTTCTCAAAAGCTGGGCTATTCGAAAGAGTTTTAAAAAAG
AGAAAAGACGAGGGGGCATTTGTTAAAACAAGTTTCTTGGTTAAAATCGG
TTAAGCTGTTTATAAGATGCTGCATTTCCCGGCTTAAAAATAAGCTTCAT
TGGATAGCTTTGGAGCATTTTTGGGGAATTCATGGATAAATCAAGTCAAA
CGCACTTTTATAGCTTTGCATGATGTAATTGTCTCCTTTATTGTGTAATA
ATTAAAACAGGTAAAACATCGTGTATTGATTTTAAATATGGGCTCCGCTA
CCCCTAAGCTCGCTTATAAAGTAGAGTCGTCTGCCATTGTAATCCTTTGA
AAAAAAATTTTTCAACGAAAAATAAAATTTAGATCAGCAGAATTTTGTCA
AGACAGTTATTTTATGATACGAATTTCAGTCCATGATTTCGGGAGGTATA
GATCACGAGATCCTGATTTTAGTGAAACTCCGATCATTTACCCCTGTCTT
TTGCTGTCTCTACCACAGGAACCAAGTATTTCGATCAAGAATCCTAG Coding sequence (CDS) from alignment at sc0000359_pilon:6070..13366- >XLOC_045550 ID=XLOC_045550|Name=XLOC_045550|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=732bp|location=Sequence derived from alignment at sc0000359_pilon:6070..13366- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGCATTTCAAAGGCAGACAAGATTGAGGTGAAAACTAAGTCATTGTA
TAATGGTCGGAAACGCAGTATCCAGTCGTTCTCTTCTCAAGTTCATAAGC
TTGATGCGCATTTCAAAGGCAGACAAGATTGAGGTGAAAACTAAGTCATT
GTATAATGGTCGGAAACGCAGTATCCAGTCGTTCTCTTCTCAAGTTCATA
AGCTTGGTATAGCAAGTCTGAAGGCAATATTGTTCCACCATAACCTTCCA
ACACGTGGTACAAAGGACGAGATTGTGCTCAACGTTTGCCTTCTTAAGGA
GGATTCGAGAGCACTGTATCAGCAAAAACTACGTTTCTTCTCTCCTCGAG
CTAATAAAAAAGACCAGCACTCTCATTTGTCGGCAGAGACATTCTTGTGC
AGTCCGTTCCAGAAAGAGCCGAAAGTTTGCCACACCACAGGTATAGCAAG
TCTGAAGGCAATATTGTTCCACCATAACCTTCCAACACGTGGTACAAAGG
ACGAGATTGTGCTCAACGTTTGCCTTCTTAAGGAGGATTCGAGAGCACTG
TATCAGCAAAAACTACGTTTCTTCTCTCCTCGAGCTAATAAAAAAGACCA
GCACTCTCATTTGTCGGCAGAGACATTCTTGTGCAGTCCGTTCCAGAAAG
AGCCGAAAGTTTGCCACACCACAGGAACCAAGTATTTCGATCAAGAATCC
TAGGAACCAAGTATTTCGATCAAGAATCCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000359_pilon | genome | sc0000359_pilon:6070..13366 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 340-366:28 |
| Aaloc | 106-336:805 |
| Aaloc | 1-102:7298 |
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