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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000053_pilon:897864..900866+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045546 ID=XLOC_045546|Name=XLOC_045546|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3003bp|location=Sequence derived from alignment at sc0000053_pilon:897864..900866+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCCAATTCAAATGATAATCAGTTTAATTATATAGAACGACCTAG
TACGTCGAAAGAATACTGCAGACTGTGTTCTGAAGAGTACAAAGTTTACA
ACGCGGAATCTAAAGAGTGCCGGTTTAATTTATTCGCcacgaaaaaatcc
aaaaagaaaaaagagaaagacaaCGCTACACTGAGAGACAGACTTAGAGC
TGTGAATTTGATTGTTGAAGAGGATCCTGACTTGTCGGAGTCGATTTGCC
GATCATGcgtatcaaatttgaaaaagattgaagaggcgaagaaaataaca
gaaaaatgGGTCGGACTCGGACTGAAAAGGAAACTCCCAGAGGTGGATGA
AGAGAATGAACAGCAGATTGTTGGCgcgaaaaaaatcaagatcGCTAATG
ATTGTAATGAGAAGGTGAGTTTTTAACCATTCCTATATTTTTATGCATTA
TAGCCCATTACTTACCTTACCTTAACTTTTTGGTCCTAGATCAAACTCTA
GACATTCTATAATTTCAGATGGAAGTTATTGATCTAGCTGACTTAGACGA
TATCTCGCATGCATGCTTTACGGAATTTCCCAACGCTGTAAAAGAGCTGG
AGGCACCCACCGTCGAAAGTATTGTCAATTTTAGCGATGCAGAATCTTGC
AAAGCAGTCGATGCCCTATGTCCGGTTCTATCTAGTGCTTTGAAAGGTGC
GATGGGTGGAAAAGATCGAAAACCAGACGGAGAATCCTCAGTTGACCATG
CAATCAGAACTTTATGCTACGGCGCCATTTTCAAATCACGGTTAGTAATA
AAATATTAATACGTAAAGAATTGATTGTATTATATCTGTGCCTGGGTTCG
ACTGACCTTGATATCTGACCTTGGGCATCGCTAGAagtttattcaaattt
tcttttaaggTATCCCAAGAATTCAAACGTTGTTGCTTCGAGAAATGACC
AAATGTTAGTATCGGCGGGTGCTAGCAAACGTTCTTTTGGGTGGTTCAAC
AAAATGGGTCTTTCTAATTGTTATAATACTGCTTTGGAGCGTAACGAAGA
CATGGGGGAAAATTTCGATTCTGAAGTCCTTGGTTGGAAAAAGGAGATCG
AAGATGACTACAAGGCAATTTTGGCATTAAAGAAAGATAATGACGCAACG
TTCGAGGAGGCAAAACAGCTACGGAGATTGACAAATCCGGCTGCTGCACT
ATTTAAggtttttaattactttttatacCATCATAAATATCCCAGTCAAA
GCTACGGTGAAAATTGTTCTAGTTCTAATGATAAATTTAAAACAATACGT
TGATTGGTTTCTGCTAAAACTGAAacactcaattttcttttagatTGTTG
GAGACAACTTGGACTTTGAGAAAAGGGCAAGACACCAAGGAAAGAACAGA
CGTAATGAAAGCATCCATTGGTTTCACTACATGGCTATATTACACAGGGT
TCATCCCTCTAAAGGTAACGACTATTATTTTCGAAATCtgcatcaaaaat
tttttgttttcttcagaATTGATGATCAATAAGAAAGGACtaatttaatg
ggataaaaactttaatttcaCTTTTTACATTTAGCCAATCGAACACTACA
AGAGTATCGCAATATGCCTATATTCCCTGGATTGAAAACGCAAGAAGTGC
TTTCAAGCACCTACAAGATCCTGATAGCCCGAAGCATTGTTAACTTCATC
CCTGCATTCAAGTTTCTACGGAAAAACGTCTGCTGGCATATACCTCAcgc
attttcaaaagaaatgtcAGAAAAATCTCGCGTTGTAAGTATTGGTATAA
GCCCTAATAATCTTACATACCTTACTTAAAAACATAAATTGACGAGGAGA
TATGAGTTGTGACATTATGTTAGAAATCTTTTATACTATGGTAAATACCG
TCACAAAGTTTaattaaaaaagataaacattATTTATTCAGGTACCTCTT
GGACTTTCGTTTCACGCTGAAAACTCTACAACcgaaattattcaaattat
acGGGAAATTCAAGACAAATATGTTCCAATGATGGACATTGACACTGACG
AAGATGATGAAATAGGGAGACTAATCATCGAATCACTATTGTTCGGAGGA
GACCAGCTTACAGAAGAGAGGATCATTAACGCTCAACAAGGCTTTGTCGA
TTGTCGAAACGATTATGAGATGCTGCAAGGGTTGAAACCAGCTTATGAAG
ACTGGCATTTGAAGCGAACCCTATACGAGGTAAGACTGAATAAAACAATA
TTTAGGTGTGCCTTATATATTGATAATAACTAAACCTTctatgattattt
ttataatatcaaaatgaatcaaaaataccaatgacataaaaaaaataatc
gtTTACTTCCATCAGGTTAAGGAAACAATATTTCGCCAAAGAGAATCAGG
GGCCCAACATGGTACCACCGAATGGTCGATGAATGTAACGAATTCAACAA
ATGCCAAAAAAGGAGCTAAAGACGATTTCAACGCATTCAAAGAGTTTAGC
GATGTCGAAACAGATGCATTAATTGTAGCTGCAACGATGACTCATTTTAA
TATGCAAAAAATCGAGGGTAAGTTGAAAGTTGTTCAAAGGATTTTATTTA
ATTCAGTTTTCATAccaatgatgaaatttataaGTTTTCTGAAGAATTCt
cttatcttttgaaaattttaatgattaattttttttcaccttacAGATGA
TCCTATTCCTGGCGATGTCAAAAATGGTGGTAACGATGCAAGATATGCTT
GGCTACAAAAGAATGtggaagaaattttcagaaggtCAGCACTTTAGCAT
AAAGACTATATTATTACAGCGTGAAGTAATAGTAAACAAAGTTGGTTTAT
ATTCTACAAGTTTAACCCTTTTTTACCAAgatttctttttgtattttcag
aTTCACAGTGATGTATAATGTTGAGATCAAAGAAAATGCTAAAGTCGAGG
ATAATCCATTCAAGATGAAACTGTACTTTTGTTCGAAATgcgaaaacaca
aca Coding sequence (CDS) from alignment at sc0000053_pilon:897864..900866+ >XLOC_045546 ID=XLOC_045546|Name=XLOC_045546|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3972bp|location=Sequence derived from alignment at sc0000053_pilon:897864..900866+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCCAATTCAAATGATAATCAGTTTAATTATATAGAACGACCTAG
TACGTCGAAAGAATACTGCAGACTGTGTTCTGAAGAGTACAAAGTTTACA
ACGCGGAATCTAAAGAGTGCCGGTTTAATTTATTCGCcacgaaaaaatcc
aaaaagaaaaaagagaaagacaaCGCTACACTGAGAGACAGACTTAGAGC
TGTGAATTTGATTGTTGAAGAGGATCCTGACTTGTCGGAGTCGATTTGCC
GATCATGcgtatcaaatttgaaaaagattgaagaggcgaagaaaataaca
gaaaaatgGGTCGGACTCGGACTGAAAAGGAAACTCCCAGAGGTGGATGA
AGAGAATGAACAGCAGATTGTTGGCgcgaaaaaaatcaagatcGCTAATG
ATTGTAATGAGAAGATGGCTTCCAATTCAAATGATAATCAGTTTAATTAT
ATAGAACGACCTAGTACGTCGAAAGAATACTGCAGACTGTGTTCTGAAGA
GTACAAAGTTTACAACGCGGAATCTAAAGAGTGCCGGTTTAATTTATTCG
CcacgaaaaaatccaaaaagaaaaaagagaaagacaaCGCTACACTGAGA
GACAGACTTAGAGCTGTGAATTTGATTGTTGAAGAGGATCCTGACTTGTC
GGAGTCGATTTGCCGATCATGcgtatcaaatttgaaaaagattgaagagg
cgaagaaaataacagaaaaatgGGTCGGACTCGGACTGAAAAGGAAACTC
CCAGAGGTGGATGAAGAGAATGAACAGCAGATTGTTGGCgcgaaaaaaat
caagatcGCTAATGATTGTAATGAGAAGATGGAAGTTATTGATCTAGCTG
ACTTAGACGATATCTCGCATGCATGCTTTACGGAATTTCCCAACGCTGTA
AAAGAGCTGGAGGCACCCACCGTCGAAAGTATTGTCAATTTTAGCGATGC
AGAATCTTGCAAAGCAGTCGATGCCCTATGTCCGGTTCTATCTAGTGCTT
TGAAAGGTGCGATGGGTGGAAAAGATCGAAAACCAGACGGAGAATCCTCA
GTTGACCATGCAATCAGAACTTTATGCTACGGCGCCATTTTCAAATCACG
ATGGAAGTTATTGATCTAGCTGACTTAGACGATATCTCGCATGCATGCTT
TACGGAATTTCCCAACGCTGTAAAAGAGCTGGAGGCACCCACCGTCGAAA
GTATTGTCAATTTTAGCGATGCAGAATCTTGCAAAGCAGTCGATGCCCTA
TGTCCGGTTCTATCTAGTGCTTTGAAAGGTGCGATGGGTGGAAAAGATCG
AAAACCAGACGGAGAATCCTCAGTTGACCATGCAATCAGAACTTTATGCT
ACGGCGCCATTTTCAAATCACGgTATCCCAAGAATTCAAACGTTGTTGCT
TCGAGAAATGACCAAATGTTAGTATCGGCGGGTGCTAGCAAACGTTCTTT
TGGGTGGTTCAACAAAATGGGTCTTTCTAATTGTTATAATACTGCTTTGG
AGCGTAACGAAGACATGGGGGAAAATTTCGATTCTGAAGTCCTTGGTTGG
AAAAAGGAGATCGAAGATGACTACAAGGCAATTTTGGCATTAAAGAAAGA
TAATGACGCAACGTTCGAGGAGGCAAAACAGCTACGGAGATTGACAAATC
CGGCTGCTGCACTATTTAAggTATCCCAAGAATTCAAACGTTGTTGCTTC
GAGAAATGACCAAATGTTAGTATCGGCGGGTGCTAGCAAACGTTCTTTTG
GGTGGTTCAACAAAATGGGTCTTTCTAATTGTTATAATACTGCTTTGGAG
CGTAACGAAGACATGGGGGAAAATTTCGATTCTGAAGTCCTTGGTTGGAA
AAAGGAGATCGAAGATGACTACAAGGCAATTTTGGCATTAAAGAAAGATA
ATGACGCAACGTTCGAGGAGGCAAAACAGCTACGGAGATTGACAAATCCG
GCTGCTGCACTATTTAAgatTGTTGGAGACAACTTGGACTTTGAGAAAAG
GGCAAGACACCAAGGAAAGAACAGACGTAATGAAAGCATCCATTGGTTTC
ACTACATGGCTATATTACACAGGGTTCATCCCTCTAAAGatTGTTGGAGA
CAACTTGGACTTTGAGAAAAGGGCAAGACACCAAGGAAAGAACAGACGTA
ATGAAAGCATCCATTGGTTTCACTACATGGCTATATTACACAGGGTTCAT
CCCTCTAAAGCCAATCGAACACTACAAGAGTATCGCAATATGCCTATATT
CCCTGGATTGAAAACGCAAGAAGTGCTTTCAAGCACCTACAAGATCCTGA
TAGCCCGAAGCATTGTTAACTTCATCCCTGCATTCAAGTTTCTACGGAAA
AACGTCTGCTGGCATATACCTCAcgcattttcaaaagaaatgtcAGAAAA
ATCTCGCGTTCCAATCGAACACTACAAGAGTATCGCAATATGCCTATATT
CCCTGGATTGAAAACGCAAGAAGTGCTTTCAAGCACCTACAAGATCCTGA
TAGCCCGAAGCATTGTTAACTTCATCCCTGCATTCAAGTTTCTACGGAAA
AACGTCTGCTGGCATATACCTCAcgcattttcaaaagaaatgtcAGAAAA
ATCTCGCGTTGTACCTCTTGGACTTTCGTTTCACGCTGAAAACTCTACAA
CcgaaattattcaaattatacGGGAAATTCAAGACAAATATGTTCCAATG
ATGGACATTGACACTGACGAAGATGATGAAATAGGGAGACTAATCATCGA
ATCACTATTGTTCGGAGGAGACCAGCTTACAGAAGAGAGGATCATTAACG
CTCAACAAGGCTTTGTCGATTGTCGAAACGATTATGAGATGCTGCAAGGG
TTGAAACCAGCTTATGAAGACTGGCATTTGAAGCGAACCCTATACGAGGT
ACCTCTTGGACTTTCGTTTCACGCTGAAAACTCTACAACcgaaattattc
aaattatacGGGAAATTCAAGACAAATATGTTCCAATGATGGACATTGAC
ACTGACGAAGATGATGAAATAGGGAGACTAATCATCGAATCACTATTGTT
CGGAGGAGACCAGCTTACAGAAGAGAGGATCATTAACGCTCAACAAGGCT
TTGTCGATTGTCGAAACGATTATGAGATGCTGCAAGGGTTGAAACCAGCT
TATGAAGACTGGCATTTGAAGCGAACCCTATACGAGGTTAAGGAAACAAT
ATTTCGCCAAAGAGAATCAGGGGCCCAACATGGTACCACCGAATGGTCGA
TGAATGTAACGAATTCAACAAATGCCAAAAAAGGAGCTAAAGACGATTTC
AACGCATTCAAAGAGTTTAGCGATGTCGAAACAGATGCATTAATTGTAGC
TGCAACGATGACTCATTTTAATATGCAAAAAATCGAGGGTTAAGGAAACA
ATATTTCGCCAAAGAGAATCAGGGGCCCAACATGGTACCACCGAATGGTC
GATGAATGTAACGAATTCAACAAATGCCAAAAAAGGAGCTAAAGACGATT
TCAACGCATTCAAAGAGTTTAGCGATGTCGAAACAGATGCATTAATTGTA
GCTGCAACGATGACTCATTTTAATATGCAAAAAATCGAGGATGATCCTAT
TCCTGGCGATGTCAAAAATGGTGGTAACGATGCAAGATATGCTTGGCTAC
AAAAGAATGtggaagaaattttcagaagATGATCCTATTCCTGGCGATGT
CAAAAATGGTGGTAACGATGCAAGATATGCTTGGCTACAAAAGAATGtgg
aagaaattttcagaagaTTCACAGTGATGTATAATGTTGAGATCAAAGAA
AATGCTAAAGTCGAGGATAATCCATTCAAGATGAAACTGTACTTTTGTTC
GAAATgcgaaaacacaacaaTTCACAGTGATGTATAATGTTGAGATCAAA
GAAAATGCTAAAGTCGAGGATAATCCATTCAAGATGAAACTGTACTTTTG
TTCGAAATgcgaaaacacaaca
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000053_pilon | genome | sc0000053_pilon:897864..900866 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1885-1986:2902 |
| Aaloc | 1798-1881:2699 |
| Aaloc | 1594-1794:2366 |
| Aaloc | 1306-1593:1942 |
| Aaloc | 1108-1305:1587 |
| Aaloc | 985-1104:1344 |
| Aaloc | 688-984:911 |
| Aaloc | 415-684:519 |
| Aaloc | 1-414:1 |
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