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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000179_pilon:162611..164826+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045538 ID=XLOC_045538|Name=XLOC_045538|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2216bp|location=Sequence derived from alignment at sc0000179_pilon:162611..164826+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAATGTCAGTGAACGAAAGCAAAGTGAAATATTATACCAATAACCGGCA
TCATTATACCAACAGGTGGAACAAGAGAAACTTCGATGCTGAATATGAAG
ATATGAAAAGCATAGAAGAGCTGCCCAACCCAGCTGCTAAGAGTAGGCGT
GCTAAGGAAACTGGCTACACTGGACTCAGCGTTTTGGCCAATCTCAACTT
TCTGTAtggttttgatgtgtttaaagATATGGTTCATGATGTCATGCACT
TGGTCTGCTTAAATCTTACACGAAAGTTGTTTGTGAGAATCTTCACTGAC
GAACATTTTGATATCGATGCAGTTGGAAATGAACTTAAAGACTTTCCCTT
TACTTCTGGTAACTATGCTTTCCCAATATTTTATTAGCTTGCCCGGGTTT
AATGAACACGTTTGACCTTTTATGCATCACAGAAGGAAGTTTTCTACTTG
TTTTACTTTCTCGGGTAGTATATGGATCAACCAAAAGTCTCCCTATTTTC
TCAAGTTAACATACCCTAGTACTCGTTTTGCtcattttttatgtaaaaaa
aaagtcCCCTTTCACAGAATAAAATAAGTATGGCTTGAGTGAGTGAGACA
ATatataataatacaataattCGGGACCTTAattgaattttatgttttgt
ttttttacagaaatggtTGACGGTCATTGCCCCAAGAACCTATCCAAATT
CAATTCGTGGACCGCAGAGGAGTGGCAAATCTTTGCTTTCCCAGTTGCTG
AATTGTTGCTCCACGAAAAGCTGTCTGAACGGGACTACCACCTGGTTTAT
TTAAATGCCCGCATTGTTGAGCTCTTGTTTCATCACAGAGAGGGACTTCA
AGAAGATGAGATTGCGATTTTGAGGGATTCGTGTTGGAGACGCCTCATCA
TTCTAGAAGAAACTGTCGGTCAGAAACAATGTGTGATAACCACCCACAAT
TCCCTCCATATTGCTGAAGACATTGAAAGACTTAGCCATTGTGATAATCA
CTGGTGTTTTAGCAATGAGAGAGTGGTCAAACGGTAAGTTATTTCTCCTA
TTTTTCTCTATAAAATAAAACTACCTTTTGTTACTGCCGTTAATTTTAAA
GCACTATCTACACAAAGATGTCGAAAGGTACCTTATTCTTAATGAGAAAA
GTGATGTAGATATACAGTGAAAATATGTAATATTCTTTAATTGTGACGAA
ATTCAGAACATTGGAACTTGTGGTACCAGCAATATATTTTGAATACTTTT
GCAAACAATTAAATTTGCTTGTATCAAGCTCGGGAGTCAAATTCACCAAC
CAAGCAATAAACGaagttttttcatctttctagATACAAGGATTTGCCGA
CGAATTGTAAAAATATCGAGGCAACTTACGCTAAATTGGAGGTGAAGCGA
GAGATACTTGCTGTTGCAGAAGCAAACGAAAAACGAACAACGTATAAAAT
TGACAGAGTCAATGGAGTAAGTATTTTGATGTGTCTTTGTCCTTACTTTC
GCTTATTGTTATTTTAAAGTGAACTTTGTTAACACATTTTAGTCTGGCGA
TATTAGCTCTATAAAGGCGCTAACCTTGAAAAAATACTCTCTGGCTGAAT
AGGTGTCTTGGAACCACCAGAAAAAAGCGCAGGAAAAGCTTGGGCATTTT
CTTGGTCAAATTTTGATATCGTCACTTTTcagtacaaaaatatttcatat
tctTTATTGTAGATTGTGTCAAGCGTGGAAGGTGCTAAAAACTTCCCATA
CACCGACGACATACCCCTTGTCTTTGTTGGGTCAAGCTCCCTGGCCAATG
TTGGCATAGCTGATGACGCGATTCGCGAGGCAATGACGTTATTGGGTCGT
GGAGAGAttgaaatctatcaaaaatatAGATCCTGTTTTGTCAACAAACG
AAACACACTCCTTAAGATTGGGTCGTACGTTCTATTACAGTGGTGTAATG
TGGGTAAAATAGTGGAATTcatatatttgaaaaacaacaaTGGACCATTT
AAGTTCGTTCGTGTTGAGTTGTTCTTTTTGCAACAATACGTCAACCCACA
GGAAATCCCGACGCTACAAGCTACTGAGAATTGGGCCGTCGTGGCCATTG
AAACAGTCAAACGAAAGGTTTTGGTTTACATGAGCAACGAGAAATTTCTC
TGCATGGATTTCAATAGACCTAGTTTTTACTTTAGTTTTGATGCTCTCCC
CGATGTTATCCCTTGA Coding sequence (CDS) from alignment at sc0000179_pilon:162611..164826+ >XLOC_045538 ID=XLOC_045538|Name=XLOC_045538|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2736bp|location=Sequence derived from alignment at sc0000179_pilon:162611..164826+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAATGTCAGTGAACGAAAGCAAAGTGAAATATTATACCAATAACCGGCA
TCATTATACCAACAGGTGGAACAAGAGAAACTTCGATGCTGAATATGAAG
ATATGAAAAGCATAGAAGAGCTGCCCAACCCAGCTGCTAAGAGTAGGCGT
GCTAAGGAAACTGGCTACACTGGACTCAGCGTTTTGGCCAATCTCAACTT
TCTGTAtggttttgatgtgtttaaagATATGGTTCATGATGTCATGCACT
TGGTCTGCTTAAATCTTACACGAAAGTTGTTTGTGAGAATCTTCACTGAC
GAACATTTTGATATCGATGCAGTTGGAAATGAACTTAAAGACTTTCCCTT
TACTTCTGGGAATGTCAGTGAACGAAAGCAAAGTGAAATATTATACCAAT
AACCGGCATCATTATACCAACAGGTGGAACAAGAGAAACTTCGATGCTGA
ATATGAAGATATGAAAAGCATAGAAGAGCTGCCCAACCCAGCTGCTAAGA
GTAGGCGTGCTAAGGAAACTGGCTACACTGGACTCAGCGTTTTGGCCAAT
CTCAACTTTCTGTAtggttttgatgtgtttaaagATATGGTTCATGATGT
CATGCACTTGGTCTGCTTAAATCTTACACGAAAGTTGTTTGTGAGAATCT
TCACTGACGAACATTTTGATATCGATGCAGTTGGAAATGAACTTAAAGAC
TTTCCCTTTACTTCTGaaatggtTGACGGTCATTGCCCCAAGAACCTATC
CAAATTCAATTCGTGGACCGCAGAGGAGTGGCAAATCTTTGCTTTCCCAG
TTGCTGAATTGTTGCTCCACGAAAAGCTGTCTGAACGGGACTACCACCTG
GTTTATTTAAATGCCCGCATTGTTGAGCTCTTGTTTCATCACAGAGAGGG
ACTTCAAGAAGATGAGATTGCGATTTTGAGGGATTCGTGTTGGAGACGCC
TCATCATTCTAGAAGAAACTGTCGGTCAGAAACAATGTGTGATAACCACC
CACAATTCCCTCCATATTGCTGAAGACATTGAAAGACTTAGCCATTGTGA
TAATCACTGGTGTTTTAGCAATGAGAGAGTGGTCAAACGaaatggtTGAC
GGTCATTGCCCCAAGAACCTATCCAAATTCAATTCGTGGACCGCAGAGGA
GTGGCAAATCTTTGCTTTCCCAGTTGCTGAATTGTTGCTCCACGAAAAGC
TGTCTGAACGGGACTACCACCTGGTTTATTTAAATGCCCGCATTGTTGAG
CTCTTGTTTCATCACAGAGAGGGACTTCAAGAAGATGAGATTGCGATTTT
GAGGGATTCGTGTTGGAGACGCCTCATCATTCTAGAAGAAACTGTCGGTC
AGAAACAATGTGTGATAACCACCCACAATTCCCTCCATATTGCTGAAGAC
ATTGAAAGACTTAGCCATTGTGATAATCACTGGTGTTTTAGCAATGAGAG
AGTGGTCAAACGATACAAGGATTTGCCGACGAATTGTAAAAATATCGAGG
CAACTTACGCTAAATTGGAGGTGAAGCGAGAGATACTTGCTGTTGCAGAA
GCAAACGAAAAACGAACAACGTATAAAATTGACAGAGTCAATGGAATACA
AGGATTTGCCGACGAATTGTAAAAATATCGAGGCAACTTACGCTAAATTG
GAGGTGAAGCGAGAGATACTTGCTGTTGCAGAAGCAAACGAAAAACGAAC
AACGTATAAAATTGACAGAGTCAATGGAATTGTGTCAAGCGTGGAAGGTG
CTAAAAACTTCCCATACACCGACGACATACCCCTTGTCTTTGTTGGGTCA
AGCTCCCTGGCCAATGTTGGCATAGCTGATGACGCGATTCGCGAGGCAAT
GACGTTATTGGGTCGTGGAGAGAttgaaatctatcaaaaatatAGATCCT
GTTTTGTCAACAAACGAAACACACTCCTTAAGATTGGGTCGTACGTTCTA
TTACAGTGGTGTAATGTGGGTAAAATAGTGGAATTcatatatttgaaaaa
caacaaTGGACCATTTAAGTTCGTTCGTGTTGAGTTGTTCTTTTTGCAAC
AATACGTCAACCCACAGGAAATCCCGACGCTACAAGCTACTGAGAATTGG
GCCGTCGTGGCCATTGAAACAGTCAAACGAAAGGTTTTGGTTTACATGAG
CAACGAGAAATTTCTCTGCATGGATTTCAATAGACCTAGTTTTTACTTTA
GTTTTGATGCTCTCCCCGATGTTATCCCTTGAATTGTGTCAAGCGTGGAA
GGTGCTAAAAACTTCCCATACACCGACGACATACCCCTTGTCTTTGTTGG
GTCAAGCTCCCTGGCCAATGTTGGCATAGCTGATGACGCGATTCGCGAGG
CAATGACGTTATTGGGTCGTGGAGAGAttgaaatctatcaaaaatatAGA
TCCTGTTTTGTCAACAAACGAAACACACTCCTTAAGATTGGGTCGTACGT
TCTATTACAGTGGTGTAATGTGGGTAAAATAGTGGAATTcatatatttga
aaaacaacaaTGGACCATTTAAGTTCGTTCGTGTTGAGTTGTTCTTTTTG
CAACAATACGTCAACCCACAGGAAATCCCGACGCTACAAGCTACTGAGAA
TTGGGCCGTCGTGGCCATTGAAACAGTCAAACGAAAGGTTTTGGTTTACA
TGAGCAACGAGAAATTTCTCTGCATGGATTTCAATAGACCTAGTTTTTAC
TTTAGTTTTGATGCTCTCCCCGATGTTATCCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000179_pilon | genome | sc0000179_pilon:162611..164826 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 865-1368:1713 |
| Aaloc | 733-864:1335 |
| Aaloc | 361-729:663 |
| Aaloc | 1-357:1 |
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