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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000127_pilon:363741..369711- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045512 ID=XLOC_045512|Name=XLOC_045512|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5971bp|location=Sequence derived from alignment at sc0000127_pilon:363741..369711- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAATGCATGGAACAGCAGCTCCACAACCAGGAGCTAACAATAAAGC
CAATGAAGGAGGCGGCGGTGGCGGTGGAAAAGACTCACTTGACCCATTCA
CTAGAAAATCCTCTGTCAAGAAAATAGGAAAACATCCAAAAAAACAACAG
GGATCATCAAGATTCCGAAATAATCCTCATGTTGAAATTCAGCCTTTACC
ACTATTAAAAGGTATTTCTGATTTAATCTCAATCCATAACCATAGTATGA
GGAACCTAGTCAAAATTCGAACATACACAAGAAATGTAAAGTTCTTTGAT
TAACCCTTCCAGCATCTTCTTATTTTTTTACCAGGGGAAGGATCCTCCTT
AAAATCTCAAGATTAAAAATGCTTTGACCTTGAAATTGACCTGTTATAAT
TGTTCATATGGTTATTCTGAGATTATATATTTTGATTTGGCTACCTGTTT
GGTTGGTGTTTTTATACAGTCCAGAAACTTGACTATAATTACATATTAAC
TGAATTGGTCCATGAATATTTGGTACAAACTGATCTGTAAAATAATGAAG
CTTTTGACTTGAAATGATAACTTATGATACTTATGTACTTACGTCATACA
AAATTTGTCTTGCTGAAGGTGCTTAGAAAAAGTAGTTTTTTTTAGTGGGT
ACTTTTTTTACACAAGGAAAGTCCTTAATTGAACTAACAAATTCCATCTT
ATTTCAATTATTATGAACTCCAGTGAGATATGATTTTTCAGGATTTTAAC
TCAGGTATATGCCATCCTTATTGGACCTTTAAAGTCCCTCTAAGGGTGTA
AAAATCACAATATCTAATTTCTGTCCCCCTTAAAGGTTACAAAAAAACAA
GAACTCCAATATTTATCCCTAGAAAAGTCTAGATTATAGGAAAAAAGTCC
CGGGAGGGTCCCAAAATTCACAAAATTTCCCTATTTTCCCCTCCATCTTA
GATCCTAGAATATCCGATTTTTGAGAATCGGGAGGACCTCCCTGTCATTT
CGCGAACCTAGTTTTTTTTGCATGCATAATTTGATTCAAAACCTGTGTAT
GTGTGAGGTTTTACCTATCCCTTTAAAACCTAATTTAGTACTTCACTAAG
ACAAATATTGAATGTAATAACCAAAGTCATCTGCTTGTTGTTTAGTAACA
TCCAAATATTTTATAGACTTTAAAATTCCTTATGCTGAGAGATTGACATT
TTCAAACGTTTTACTTTTCTAGATTCTCCAGCTCAAGAAAGACAAGAACT
GATGATCAAGAAAATCCAATTATGTTGTAATATGTTTGATTTCATGGACC
CTGTCAGTGACTTAAGGGGCAAAGAAGTCAAGAGGTCCACACTCAATGAA
TTAGTAGAATATATTAATGCTGAAACGGGTGTCCTGACTGAACCAGTCTA
TCCAGAGATCATTAGAATGGTAATTACTTTTCCACTTGCTTTTTTTACCT
GGAAGTATCACGGTTATGTAACATCTTAAGATTGCTAGGATGTCTAGAAA
ATTGAGAACCACATATTATACATATATATATACATCTGATCATACGAAAT
TTGTAATATGACACTATGGCATCACAAAGTTCAATTTTTGTTATTTAAAT
CTAGCATTGTTATAGTTTTGGTTGCAAAAAAAAAAAGGATAAGCAGAAAC
ATCTTTAGTATATTGCCAATTTCATGAAAGTGTTTTTATCCAGTCCGAAT
TCGACTTGCAAATGCTGTGCAAGTAAATGCTAGTGTGAGATGGATCTCTT
TTGTCAGGAAGTTTTGTGTAACGCAAAACTACAGTTTACAAGAAATGGAT
GAGAATAAGGTTGAGGATGATTTGATTTTGATTATGTTTGCAAAATTAAA
GAAATCTGGTCCAACTGATTTCAATATAATGGTTCAGCTGACACTTTATA
GGAAATGTGACTGCTGACCTACATGATTTAGTTTAGTTTATGATAAAGTT
TTTAATGACATCGCTCTTCGTTTTTGAATTTGTCTTGTATTTTTCTCGGA
ATGAAGGTGTGAAATATTGAAAATTAAATTTGGTTTCATTTCGTTACAAT
CTTTCCCTCCAATGTAAAACTTAATTCATTATACAATCGATATTTTGACC
TTTCAGGTCGCAATCAACTGCTTTCGAACACTTCCACCCTCAATTAATCC
AGACTTTGATCCAGAAGAGGATGAGCCGACACTGGAATGTTCATGGCCTC
ACTTACAGGTTGGACATTATTTAACAAGATTGATATCGATCTTACTTTGA
CTTTTTATTTCTATATATATGCAGGCATACTTGACAAATAATATCTTTAA
GTTTAACAATAGATTTAGTTAGTCCCAAAAAAACTACTTAAAACATGTAT
TTTTAATACTAAGATGTAATGAGTTGTGTTACTGATTCAAATTTTTCTTT
TTTTTAGATTGTGTTTGAGTTCTTCTTGAGATATTTAGAGTCACATGAAT
TTCAACCTACAATTGCCAAAAAATACATAGACCAGAAATTTGTACTGCAG
GTATGTATGGTTTTGAGGATATTGTCTATGTCATTACATATGATATCTTG
ATTAAGAAAAGGTCTCTCGTTTCAAGTAAGCTGTCCGTCATGTGCAAATT
ACCGATGTTGTTTTATTTTTCCTTTACATACATTAAAGGCTTTGCTTGCT
CTTAATTTTTATATTTCATCACAACAAATTATATTTTATCACAATTGCTA
AAGCAAAATTTTCTGTACAAGCACGATGTCCTATTATCCTATTTCCTATG
TTCTATATGTAAATTTTTCTGCTTTACAGCTTTTAGAATTATTTGACAGT
GAAGATCCACGTGAACGTGAATTCCTGAAGACCGTTCTACATCGGATTTA
TGGAAAATTCTTAGGATTACGTGCTTATATTCGAAAACAAATTAACCATA
TATTTTTGAGGTATGACTATTTTATACAGTGATCCAGAGTTTGAAGCAAT
AAAGTAAAAAAATTTAATTTTGAAATCTTCGTCTTTCGGTAAATTTAAAA
GAAAATTGGAATTTGAAGTATGTAATTATTCTTTGTCTTTTCTTTGTTGT
CCTTCTAATCAAACGAATCGACCGAGTTGATATTTAATTCTTTTCTCGTT
TTAGATTTATTTATGAAACAGAACATTTCAATGGCGTAGGTGAACTATTG
GAGATTTTAGGAAGGTAACTGATCTGGAAAATTTTCTTTTTGTGACATTA
TCTATTATATTTAACCAATTCTATGTTGAGCTCGAATTGAAGCATGTAAA
ACTTTTAAATGTCATGTATTTCTGAATTTTAGGAAGAAAAAAACATTAAA
ATAATTTTATTTTTTGTCATAGTATCATTAATGGGTTCGCACTTCCATTG
AAAGCTGAGCATAAACAATTTTTACTGAAAGTACTAATACCTCTACACAA
AGTTCGATGTCTATCACTTTATCATGCACAGGTAAGTGTGATTGACAGTC
TCTTTTCTTTATGTAAGATATGGGCTTTTCCAATACAAAAGAACTTCAAA
TATTGAATGGATTACGGAAAGGATTCGAGTTTGGATTCAAATGTTTCTGT
ATTGGAAACCCTGATGAAGCCGAGCTCAATCCCCTTTCAGAGGGTCTGGG
TCTGGTCTTTTGGAAACAATTGTTAGTCACCTTGAGATTGATGACTCATT
ATGTGTGTCTTACCCTCGCAAGGTAGGTTTATGTTTTGGGCTTCTAGGAC
TGAGTTCAAGGCTAGGTTGATTTTCGATACAGCAGTCTCGAAGAAGACCC
AGGTAAATATATGACCATTCATTTAAACCCATACATTATTTCGATTTTTT
CACTGATGTCTTTTCAGCTTGCTTATTGTGTTGTACAATTTCTCGAGAAA
GACCCCGCGTTAACAGAACCAGTAAGTCAAACCGTTTTTTGTTTTGTTTT
TCTACTAAATTTATATACATACTATCTTAATCACTACGAATTTCGACTAC
AGGCCTAATCGTTGTATTCATTCTGAAATTATTCTTGAAAATGTCCAACT
ATCAACGTCAGATAAACCCTGAAGACGAGGACTCTAAATTTACTTAAATT
ATTACAGACATACGGCGTAATCCTGATTATCTTTTTGACTCCAAATAATT
TAATAAAAGTTTGCTGTTAATTTTAAGGTTGTTATGGGTCTCATAAAATA
CTGGCCTAAGACAAGCAGCCAAAAAGAGGTAATATCTACATCAATTTTGA
AAAGACTTTAAGAGATCTTTTAGAGATTGCTAGTTATGGATTCCCTCGTT
ATTTTTTATATAATATGCTACACAAACTTTTGAATTGCTTTTGCGTGTTT
ATAAATCTTCAAATTAGACTCTAATGAAACAGGGAGCTCTAAAACGTTAT
ATAACTTCATTTCAGGTTATGTTCCTTGGAGAATTGGAAGAAGTTCTTGA
TTCGATTGAAGCTGCACAATTTCAAAAAATAATGGAACCCTTTTTCAAAA
AGATAGCCAAATGCGTCTCCAGCCCGCACTTCCAGGTAAGTGACAGCTTA
GCTTCATTTCATTCTAAATTTTTTTGTTTTATACACAGTCGAACTCTGCA
TTATCAATTCGTTTAACAAAATTGTTTTTGCTCGAACAAGACCGAATATC
TCCAGCTCTTTTGAACATGCACAATGCTGAAAATGTGGAATTTCGCTTTA
ATTGACTCCGTCTCTTTATCACTTTTGTTTTTTTCAGGTTGCGGAACGTG
CATTATATTATTGGAATAATGAATATATTCTTACTCTGATTCAAGAGAAT
TCGAATGTTATTCTTCCCATCATGTTTTCATGTCTTTATCGCATCTCCAA
GGACCATTGGAACCAGTAAGTTGATCTTATTTTAATCAGGTATCTTGGTC
AGCCTCAGCCCTGCATTCCAAGGAATTCATGTTCATACCCCGGCTACCAC
CTCAGAGAGTGGAGTATGTTATTTGGGTAATCTGATCCAGGCCATTTTTC
ATGCCCCTTAAGAGTCCGGTTATCAGACGCTACCCCTCTTGAAATTACTA
AAATATTGGTAAAAACAGCCTCTTAAGTGAAAAACACTAGAAAAAGTGCC
CTTTTTGGCCACAAACGGACGCTGCCTTGCCCTTTTTAAAATATGGCCTA
TGATCTAAGCATTGATTATCTGGGACTGATAGAAGAATTCGGGTCTCCTA
GGTCTAGTGCAATTTGAAAATGGAATGGACTTTCTTAACCTCTGCCCTAC
TAACAGTTACTTAATAAACGTACTTTATTTATGATGTAATGGTTTTTTCT
AAAGGAAGTAGCAATCATCTGTATAATAATTTCTATATTTTGAAGATACT
TGTCTATCATTCCAGTAGATATTTATTCTAGAAGGTTTCTAATCAATTTT
TTCTCTTCTTTAGGACGATTGTTGCATTGGTATATAATGTTTTGAAAGCC
TTCATGGAAATGAATGGGAAATTATTTGATGAATTAACATCTTCTTATAA
AGCTGAACGACAAAAGTAAGTTCTTGAAAATGTTATCCCCTAAAATTACA
CCTATTGAACCATTAATATTTTACAGAACCAAGTCTCTAGTAAAAATGAT
ATTCATGGATATAAAACGTGTTGATGTCCTTCAAAAACTTAAACTGTTTT
TTTGTTTTGTCCCTTAGCCGAGTGAAAAATTAAATTTCGGTCCTTTTTGT
TAAATCAGCCAAATTTGGTAATCAGAATTCATTACCCTCTGCGATACAAT
ACGGAATTTGTAACATTTGAACTTGGTTATAAGGCAATTATGCGAACAAA
CCGTTTCAATATTCCGAGATCCAGAAGTTTGGATCTGTGAGAACTAGACG
AAAAGAAATTGTATTCTGGTAAACAAAAATGAATTGGTTAGTGTTTTACT
TCCAATGTAATTCGTGTTTTTTTTTCGTAGGGAGAAGAAAAAGGAAAAAG
AGCGGGAAGAACTTTGGAAGCATCTCGACAAAATTGAATTGGAAAAGAAA
ACGGGAGATCAGCCAACCTAA Coding sequence (CDS) from alignment at sc0000127_pilon:363741..369711- >XLOC_045512 ID=XLOC_045512|Name=XLOC_045512|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2898bp|location=Sequence derived from alignment at sc0000127_pilon:363741..369711- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAATGCATGGAACAGCAGCTCCACAACCAGGAGCTAACAATAAAGC
CAATGAAGGAGGCGGCGGTGGCGGTGGAAAAGACTCACTTGACCCATTCA
CTAGAAAATCCTCTGTCAAGAAAATAGGAAAACATCCAAAAAAACAACAG
GGATCATCAAGATTCCGAAATAATCCTCATGTTGAAATTCAGCCTTTACC
ACTATTAAAAGATGCCAATGCATGGAACAGCAGCTCCACAACCAGGAGCT
AACAATAAAGCCAATGAAGGAGGCGGCGGTGGCGGTGGAAAAGACTCACT
TGACCCATTCACTAGAAAATCCTCTGTCAAGAAAATAGGAAAACATCCAA
AAAAACAACAGGGATCATCAAGATTCCGAAATAATCCTCATGTTGAAATT
CAGCCTTTACCACTATTAAAAGATTCTCCAGCTCAAGAAAGACAAGAACT
GATGATCAAGAAAATCCAATTATGTTGTAATATGTTTGATTTCATGGACC
CTGTCAGTGACTTAAGGGGCAAAGAAGTCAAGAGGTCCACACTCAATGAA
TTAGTAGAATATATTAATGCTGAAACGGGTGTCCTGACTGAACCAGTCTA
TCCAGAGATCATTAGAATGATTCTCCAGCTCAAGAAAGACAAGAACTGAT
GATCAAGAAAATCCAATTATGTTGTAATATGTTTGATTTCATGGACCCTG
TCAGTGACTTAAGGGGCAAAGAAGTCAAGAGGTCCACACTCAATGAATTA
GTAGAATATATTAATGCTGAAACGGGTGTCCTGACTGAACCAGTCTATCC
AGAGATCATTAGAATGGTCGCAATCAACTGCTTTCGAACACTTCCACCCT
CAATTAATCCAGACTTTGATCCAGAAGAGGATGAGCCGACACTGGAATGT
TCATGGCCTCACTTACAGGTCGCAATCAACTGCTTTCGAACACTTCCACC
CTCAATTAATCCAGACTTTGATCCAGAAGAGGATGAGCCGACACTGGAAT
GTTCATGGCCTCACTTACAGATTGTGTTTGAGTTCTTCTTGAGATATTTA
GAGTCACATGAATTTCAACCTACAATTGCCAAAAAATACATAGACCAGAA
ATTTGTACTGCAGATTGTGTTTGAGTTCTTCTTGAGATATTTAGAGTCAC
ATGAATTTCAACCTACAATTGCCAAAAAATACATAGACCAGAAATTTGTA
CTGCAGCTTTTAGAATTATTTGACAGTGAAGATCCACGTGAACGTGAATT
CCTGAAGACCGTTCTACATCGGATTTATGGAAAATTCTTAGGATTACGTG
CTTATATTCGAAAACAAATTAACCATATATTTTTGAGCTTTTAGAATTAT
TTGACAGTGAAGATCCACGTGAACGTGAATTCCTGAAGACCGTTCTACAT
CGGATTTATGGAAAATTCTTAGGATTACGTGCTTATATTCGAAAACAAAT
TAACCATATATTTTTGAGATTTATTTATGAAACAGAACATTTCAATGGCG
TAGGTGAACTATTGGAGATTTTAGGAAGATTTATTTATGAAACAGAACAT
TTCAATGGCGTAGGTGAACTATTGGAGATTTTAGGAAGTATCATTAATGG
GTTCGCACTTCCATTGAAAGCTGAGCATAAACAATTTTTACTGAAAGTAC
TAATACCTCTACACAAAGTTCGATGTCTATCACTTTATCATGCACAGTAT
CATTAATGGGTTCGCACTTCCATTGAAAGCTGAGCATAAACAATTTTTAC
TGAAAGTACTAATACCTCTACACAAAGTTCGATGTCTATCACTTTATCAT
GCACAGCTTGCTTATTGTGTTGTACAATTTCTCGAGAAAGACCCCGCGTT
AACAGAACCACTTGCTTATTGTGTTGTACAATTTCTCGAGAAAGACCCCG
CGTTAACAGAACCAGTTGTTATGGGTCTCATAAAATACTGGCCTAAGACA
AGCAGCCAAAAAGAGGTTGTTATGGGTCTCATAAAATACTGGCCTAAGAC
AAGCAGCCAAAAAGAGGTTATGTTCCTTGGAGAATTGGAAGAAGTTCTTG
ATTCGATTGAAGCTGCACAATTTCAAAAAATAATGGAACCCTTTTTCAAA
AAGATAGCCAAATGCGTCTCCAGCCCGCACTTCCAGGTTATGTTCCTTGG
AGAATTGGAAGAAGTTCTTGATTCGATTGAAGCTGCACAATTTCAAAAAA
TAATGGAACCCTTTTTCAAAAAGATAGCCAAATGCGTCTCCAGCCCGCAC
TTCCAGGTTGCGGAACGTGCATTATATTATTGGAATAATGAATATATTCT
TACTCTGATTCAAGAGAATTCGAATGTTATTCTTCCCATCATGTTTTCAT
GTCTTTATCGCATCTCCAAGGACCATTGGAACCAGTTGCGGAACGTGCAT
TATATTATTGGAATAATGAATATATTCTTACTCTGATTCAAGAGAATTCG
AATGTTATTCTTCCCATCATGTTTTCATGTCTTTATCGCATCTCCAAGGA
CCATTGGAACCAGACGATTGTTGCATTGGTATATAATGTTTTGAAAGCCT
TCATGGAAATGAATGGGAAATTATTTGATGAATTAACATCTTCTTATAAA
GCTGAACGACAAAAGACGATTGTTGCATTGGTATATAATGTTTTGAAAGC
CTTCATGGAAATGAATGGGAAATTATTTGATGAATTAACATCTTCTTATA
AAGCTGAACGACAAAAGGAGAAGAAAAAGGAAAAAGAGCGGGAAGAACTT
TGGAAGCATCTCGACAAAATTGAATTGGAAAAGAAAACGGGAGATCAGCC
AACCTAAGGAGAAGAAAAAGGAAAAAGAGCGGGAAGAACTTTGGAAGCAT
CTCGACAAAATTGAATTGGAAAAGAAAACGGGAGATCAGCCAACCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000127_pilon | genome | sc0000127_pilon:363741..369711 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1360-1449:91 |
| Aaloc | 1258-1356:608 |
| Aaloc | 1129-1254:1285 |
| Aaloc | 1009-1128:1607 |
| Aaloc | 958-1008:1845 |
| Aaloc | 904-957:2155 |
| Aaloc | 796-903:2649 |
| Aaloc | 736-792:2867 |
| Aaloc | 604-732:3193 |
| Aaloc | 511-603:3565 |
| Aaloc | 409-510:3866 |
| Aaloc | 214-408:4748 |
| Aaloc | 1-210:5972 |
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