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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000096_pilon:237578..238722+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045502 ID=XLOC_045502|Name=XLOC_045502|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1145bp|location=Sequence derived from alignment at sc0000096_pilon:237578..238722+ (Clytia hemisphaerica_ch_hm2_pilon)
AACTGTTATGGATTCAAGTCCAACtgtaaatatatttcaaagcTTATAAG
AGAAAATGACTGTATCTATTTGACCGAAACTTGGCTTCTTAAATCAGAGG
AGCACTTCTTACATGAATTTGAGTCAGAGTATAAAATTATAACCGTTCAA
GCAGAAAAACGAAACAGCGGTAGACCTTTTGGAGGAACAATTCTACTcct
gaaaaataataaattctcTCAGACTAATACAATACTACAAGAAATGAACT
ACACTACAATCAATACACACCTTGGTAACACATCAATCACCATCTCAGGA
GTCTACTTACCAACATCAAGTAATACAGACTATATAGAAACCTACAAAAC
CCAATTGTCAACTTTGATGGGAATCCATACTCAATTTGCTTCAACCTCTG
AATCTATCATATTAGGTGATTTCCAGTGCTTTCCAAATATCCCAAACTCA
CCAAGGACTGCTAAACTCAACAccctttcaaaatttcttacaAACTTTAT
AAACGAAATGGATCTGATTGCAATTGATATCATGAACGGAACAGGCCCAT
CATACACATATCATCACCATACCCTACCAAATAAATCGTACATTGATCAC
ATTCTTGTTTCACAAGACATTGCAAATATGACATCCGAGACTGCGGTAAT
AGAACCAGCGCCTGAGAATACCAGTGACCATCTTCCAGTTTCCACTTCCT
TATTTCTCGAGAACACATCATATCATCATCAACAGCAAACAACACCTCCG
AGATTGTCTCAAATACCCAACTATCTTTGGTCCAATGAAAGATTTCTGGA
GCTCTACAGAAAAAAGGTTGCTGAGGCAATGCCACTCAAATCAAGCGAAA
ATATTAACAAAGATCTAGACACTCTCTCTGATCTACTTAAAGAATGTGCT
AGTAAAAGCTATACAGAGATAGAAAGCAATTTCCGGAAAGTCGAACCAAA
ACAGTGGTGGAATCAGGATCTAACAAGGTGCAGAAATACACTCAAACAAA
CCTTCAATATATGGAGAGACAATGGTTTCGAAAAGGATATGAATTCAGTG
TATTATGCCCGATATGTGTTTGCCAGGAAAAGATTTCGTTATCTCGTGCG
CCATTACAAAAACCAAGCGACAGCCAAATACTACGTAAACATTGA Coding sequence (CDS) from alignment at sc0000096_pilon:237578..238722+ >XLOC_045502 ID=XLOC_045502|Name=XLOC_045502|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2290bp|location=Sequence derived from alignment at sc0000096_pilon:237578..238722+ (Clytia hemisphaerica_ch_hm2_pilon)
AACTGTTATGGATTCAAGTCCAACtgtaaatatatttcaaagcTTATAAG
AGAAAATGACTGTATCTATTTGACCGAAACTTGGCTTCTTAAATCAGAGG
AGCACTTCTTACATGAATTTGAGTCAGAGTATAAAATTATAACCGTTCAA
GCAGAAAAACGAAACAGCGGTAGACCTTTTGGAGGAACAATTCTACTcct
gaaaaataataaattctcTCAGACTAATACAATACTACAAGAAATGAACT
ACACTACAATCAATACACACCTTGGTAACACATCAATCACCATCTCAGGA
GTCTACTTACCAACATCAAGTAATACAGACTATATAGAAACCTACAAAAC
CCAATTGTCAACTTTGATGGGAATCCATACTCAATTTGCTTCAACCTCTG
AATCTATCATATTAGGTGATTTCCAGTGCTTTCCAAATATCCCAAACTCA
CCAAGGACTGCTAAACTCAACAccctttcaaaatttcttacaAACTTTAT
AAACGAAATGGATCTGATTGCAATTGATATCATGAACGGAACAGGCCCAT
CATACACATATCATCACCATACCCTACCAAATAAATCGTACATTGATCAC
ATTCTTGTTTCACAAGACATTGCAAATATGACATCCGAGACTGCGGTAAT
AGAACCAGCGCCTGAGAATACCAGTGACCATCTTCCAGTTTCCACTTCCT
TATTTCTCGAGAACACATCATATCATCATCAACAGCAAACAACACCTCCG
AGATTGTCTCAAATACCCAACTATCTTTGGTCCAATGAAAGATTTCTGGA
GCTCTACAGAAAAAAGGTTGCTGAGGCAATGCCACTCAAATCAAGCGAAA
ATATTAACAAAGATCTAGACACTCTCTCTGATCTACTTAAAGAATGTGCT
AGTAAAAGCTATACAGAGATAGAAAGCAATTTCCGGAAAGTCGAACCAAA
ACAGTGGTGGAATCAGGATCTAACAAGGTGCAGAAATACACTCAAACAAA
CCTTCAATATATGGAGAGACAATGGTTTCGAAAAGGATATGAATTCAGTG
TATTATGCCCGATATGTGTTTGCCAGGAAAAGATTTCGTTATCTCGTGCG
CCATTACAAAAACCAAGCGACAGCCAAATACTACGTAAACATTGAAACTG
TTATGGATTCAAGTCCAACtgtaaatatatttcaaagcTTATAAGAGAAA
ATGACTGTATCTATTTGACCGAAACTTGGCTTCTTAAATCAGAGGAGCAC
TTCTTACATGAATTTGAGTCAGAGTATAAAATTATAACCGTTCAAGCAGA
AAAACGAAACAGCGGTAGACCTTTTGGAGGAACAATTCTACTcctgaaaa
ataataaattctcTCAGACTAATACAATACTACAAGAAATGAACTACACT
ACAATCAATACACACCTTGGTAACACATCAATCACCATCTCAGGAGTCTA
CTTACCAACATCAAGTAATACAGACTATATAGAAACCTACAAAACCCAAT
TGTCAACTTTGATGGGAATCCATACTCAATTTGCTTCAACCTCTGAATCT
ATCATATTAGGTGATTTCCAGTGCTTTCCAAATATCCCAAACTCACCAAG
GACTGCTAAACTCAACAccctttcaaaatttcttacaAACTTTATAAACG
AAATGGATCTGATTGCAATTGATATCATGAACGGAACAGGCCCATCATAC
ACATATCATCACCATACCCTACCAAATAAATCGTACATTGATCACATTCT
TGTTTCACAAGACATTGCAAATATGACATCCGAGACTGCGGTAATAGAAC
CAGCGCCTGAGAATACCAGTGACCATCTTCCAGTTTCCACTTCCTTATTT
CTCGAGAACACATCATATCATCATCAACAGCAAACAACACCTCCGAGATT
GTCTCAAATACCCAACTATCTTTGGTCCAATGAAAGATTTCTGGAGCTCT
ACAGAAAAAAGGTTGCTGAGGCAATGCCACTCAAATCAAGCGAAAATATT
AACAAAGATCTAGACACTCTCTCTGATCTACTTAAAGAATGTGCTAGTAA
AAGCTATACAGAGATAGAAAGCAATTTCCGGAAAGTCGAACCAAAACAGT
GGTGGAATCAGGATCTAACAAGGTGCAGAAATACACTCAAACAAACCTTC
AATATATGGAGAGACAATGGTTTCGAAAAGGATATGAATTCAGTGTATTA
TGCCCGATATGTGTTTGCCAGGAAAAGATTTCGTTATCTCGTGCGCCATT
ACAAAAACCAAGCGACAGCCAAATACTACGTAAACATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000096_pilon | genome | sc0000096_pilon:237578..238722 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1093-1146:1092 |
| Aaloc | 1-1089:1 |
|
