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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000336_pilon:239153..242307- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045491 ID=XLOC_045491|Name=XLOC_045491|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3155bp|location=Sequence derived from alignment at sc0000336_pilon:239153..242307- (Clytia hemisphaerica_ch_hm2_pilon)
GGTCGTCTTCTGCGCTCAAACATACTTCAACCCCCATGCGGTAAGTTTAT
TTTTCATTTATCTGGCACCCAGATACAGAAATTTTCATCCGACACGCTAA
AGCTCTAAAGGTCGAAAAAAAAAATCAATATCTGAAAGTTTTACATTACG
GAATTTTGCGAGACTGCGTCAAGGATTTGCAGCGGGAGGTCTGGTAATCC
AGCCCTCGTTTTCGGGGATTGGCGGGTCCAACCGAAATATTTATATGTTT
ATGCGCAAAGGCCGACTATCATTCCTCTCCGATGGGAAATTGACCCGCTC
CGTTAGAGCTTTAGCGTGGGCGGCTGCTAATCCGCCATCGGAACATCAAA
CAAATTCTTCATATGAAAACTCATGTCAAGGTATTATCTAAATATTGATT
GGCATTCATCCAAAGTATTTAACGTTTGAGTTTGAACGATTCTTTTTTAT
TTTTCCAGACATTTCTACCATTACACAACGTTATGACTGTATCACCGAGC
TAACTGAAAAAGAAGGACTTTTTCGGAACCTACAGACAGGTAAATTTTAG
ATTCTTTCTTGTATGTATTTCTGTATTTCGTCGCGAAATGTTGCAAATAC
AATAATTTTCATAGATTTTACATCAAAATGGGATAATAACTTTCGCGGCG
ATTAAATTTCGCGGTTGAGTTCACCCGAACTTTTATAGAACTTAAGGCTT
GTCATACTCAGTGCCGTTACCAATCTGGTAATTTAGGAGTAGCCCGTCGA
ATTTGAGCTTAGTCGACGTGTCAGTTCTCATGTTATCTCTTAAATTTCTT
TAATACGGAACTTTTTAAAATTTTCTTTACAGTTTTGTCACGGTTTTTGG
ATGTCGATCAATTAATCTCATGTCTCGTCCAAATACCTAAGAAAAAAGAT
CTGAGAGTGTTCGAAAAGAAAATTGCTGATTCCATCTCCTTGAAACACGT
CATTGAACTAATACCAACACTCCAAGAAGCCTTGAAAGATTCAGAAAATG
GATTGTTTAAGGCATATTATCAGGTTCGACTTTGGGTTAATATCATTTCC
AAATAACTAACTTCAAGTCAGTCAAATTAAATTATTGACTTTTTGATCAG
TAGATTGATATCCCTATCGTTCGTCAAATGAAGGGATGGTAAAAATGGAA
AAATATGCGCGGAGTTTAACAGCCATATGTATAGCAATATACGGAAAAAT
TAGCGGCGGTAGAGTTTGGAAAGACCGTCAAACTCTACCAGTTGTAAACT
ATTTTCGGCAAAAAAAAAACTTTCGCGAATTTTCTTCAGATTTGGGCCTT
TTTCTTAGATAGTGGTTTGTTGTCCCCTTTCAACTAGTTCGGCAATGTCC
CTTTTCAGTTTACGAAACCCCTTGTTTCTGCTCTTCTGTTTGGAATCAAT
ATATTTTGATTTTTTCAATTTTTTTAAGTCACTTTCAGATCCACGATATG
AGAATATTCTCGAAGAAATAGGAACAGTGATTCACGATGAGACGCATTAC
CATAAAGGAACATTGAATATGAGAACACAAAAATTGTTCTCAGTTAAGGT
ACACGTTTTTTTATACGAACAAACTATATAAGAACGTAAGAATTCGATGG
CCCAAATGTTAAGAACAAGTTAAGAACATTTTTTAAGGAAAATGGACAAA
ATTGCTCAAAAATGGTGAAAATAAGAACATGTTACGAACATTTTTAGGCT
TAAAACTCAAACGATCAAAAACTTTGGGTGTTCTTATAAATTGTTTAATT
TCAATATTTATTTCTGTTGGTTTATTTTCACCTGAGCTGTACTTATATCA
CGAGATATCATATATAAAACATACTTGATAGAGCTACTCTGTTCTTCCCA
AGCCAGTGCGATCGAAGCAAAATAATCTTAGTAGACCATAGTAGTATTTG
TTCAATCCCAAACAAAAAACCTGCATGACGAGAAGCAAGGAGTCAATAGA
ATGGACTCAATCGATCACTCAATCGATAGTCTGCTTCTTAGAGATGGCAT
TTCTAATTTTGCATATAAGATATCTGTGACTTACATGGATACAGTGACAC
TTCTTATTCTCTTTATTTTGAAAAATTTTGAAAAATATTTCCGTGATTGG
AAGATAATCCAATTTTTCAGAATTTCAGTTTAGCACATGGACATTCGTGT
TCATTCCAAGTTGCATAACTTTTCATGAGATTATTCAATTTTTTGATATT
AGTTTTTGCTTCTTTTATTTTTCAGCCTAATGTGAATGGTGAGTTATTTG
ATTTTAATTTTCGTTGAATTTCAGCTTATGATAGGATAATTATATGAAAA
ATTATAAAGTTAATTCGCTTAAGAGCGCTCTGATTATAGATTTGCTTACC
ATTTTCAACGACTGCTTCAATTCTAACATATTCTGTACTGTGAAGAAATC
AAAGTGCTCTGAATGATCTTTTCAACGGTATATAATTTGTTATATTTTGA
GAATTATTTGGAAAATGGCGAGCAAAACAAATTTTATAGTGCACACTTAA
CACGACTTTAGGGGGGGGGTTCAGGGGGTACCCGACTCCGCAATTCAGTC
AATTTTTTCTCCAATTTCCGTCAAGCCGTCTTAAATTGAACCAAAATTCC
GTCACCGAAAATTCCTTTGAAATTCAATATTTTTGTCGAAAATTCCGCAA
ATTTGGAATATCTTTTACCAATTTCGAAATTCCGCAATTTTTTTTGCTAA
ATTCCTTTTTTCCGCACTAAAGTTGTCTAATTTTCCGTCTCCGTCAGAGA
ACCCAATTTCCGTAATTCCGTCTAAATTTTCGCCAAATTCCGCCACTCCG
TCCGAAAAAAGGGGCCGATTCCGCTCCTCCGCCAAACGTGAACCCCCCCC
CCTTTAGGTATCTTTTCCTTTGAAGCCTTCGAGAGTTTTATAGAAGAGCT
AAAAAATTACGCCAGCCGAACTTTTGTGAAATTAAAAATTAAAATTAAAT
TTTAAATGGAGTAGGTTCGCACATCCACTTTCCAATTTTGTCATTGTTGA
TTGTACATGGATTATTTTGTCATTGTTGATTGTATGTGGATTATTTTGTC
ATTGTTGATTGTACATGGATTATTTTAAAATCGAAAAGCTCTCATCTCCT
TATCAAACATTTGGATTTTTGACAATTATTCTTTGAACAGGTTTATTGGA
TGTAG Coding sequence (CDS) from alignment at sc0000336_pilon:239153..242307- >XLOC_045491 ID=XLOC_045491|Name=XLOC_045491|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=894bp|location=Sequence derived from alignment at sc0000336_pilon:239153..242307- (Clytia hemisphaerica_ch_hm2_pilon)
GGTCGTCTTCTGCGCTCAAACATACTTCAACCCCCATGCGGGTCGTCTTC
TGCGCTCAAACATACTTCAACCCCCATGCGACATTTCTACCATTACACAA
CGTTATGACTGTATCACCGAGCTAACTGAAAAAGAAGGACTTTTTCGGAA
CCTACAGACAGACATTTCTACCATTACACAACGTTATGACTGTATCACCG
AGCTAACTGAAAAAGAAGGACTTTTTCGGAACCTACAGACAGTTTTGTCA
CGGTTTTTGGATGTCGATCAATTAATCTCATGTCTCGTCCAAATACCTAA
GAAAAAAGATCTGAGAGTGTTCGAAAAGAAAATTGCTGATTCCATCTCCT
TGAAACACGTCATTGAACTAATACCAACACTCCAAGAAGCCTTGAAAGAT
TCAGAAAATGGATTGTTTAAGGCATATTATCAGTTTTGTCACGGTTTTTG
GATGTCGATCAATTAATCTCATGTCTCGTCCAAATACCTAAGAAAAAAGA
TCTGAGAGTGTTCGAAAAGAAAATTGCTGATTCCATCTCCTTGAAACACG
TCATTGAACTAATACCAACACTCCAAGAAGCCTTGAAAGATTCAGAAAAT
GGATTGTTTAAGGCATATTATCAGTCACTTTCAGATCCACGATATGAGAA
TATTCTCGAAGAAATAGGAACAGTGATTCACGATGAGACGCATTACCATA
AAGGAACATTGAATATGAGAACACAAAAATTGTTCTCAGTTAAGTCACTT
TCAGATCCACGATATGAGAATATTCTCGAAGAAATAGGAACAGTGATTCA
CGATGAGACGCATTACCATAAAGGAACATTGAATATGAGAACACAAAAAT
TGTTCTCAGTTAAGGTTTATTGGATGTAGGTTTATTGGATGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000336_pilon | genome | sc0000336_pilon:239153..242307 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 433-447:16 |
| Aaloc | 313-432:1728 |
| Aaloc | 124-312:2322 |
| Aaloc | 43-120:2696 |
| Aaloc | 1-39:3156 |
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