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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000336_pilon:231816..234070- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045489 ID=XLOC_045489|Name=XLOC_045489|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2255bp|location=Sequence derived from alignment at sc0000336_pilon:231816..234070- (Clytia hemisphaerica_ch_hm2_pilon)
CAGAGTGGTAAATCGACTTACCTAAGACAGATTGCACTTCTCCAAATCAT
GGCACAGTGTGGTTCGTTTGTGCCCGCGGCTTACGCTTCTTTCCGCCTGT
GTAAACAAGTCTTTGTTCGAATTGGTAGTGATGATGACATTGAAACCAAT
TGCTCCACTTTTAAACTCGAGGTAATATTTTTATACTGATTTGATGTATA
CTACACCTTTATCCAAGAGTTGAGCAGTAAAGCCCGAAAGACTCTTTCGC
TTTTTGATATATGAGATGATAAGTGACCCGGCAAACACATTTTTTTTTTG
CTTTACTAAATCATGCAGCAAACTCATGCAACTAAAGGCAAACCTTTTCC
GTGATAATCAAGGTATTAAACTGTCTACTAAAAAAGGATTTCCCATGTAA
AGTCTCTTTACCAGCCGACTGCGCCCGTAGGGATCAAATTTTCAAAATTT
TCAAAATTTCCAAAAATACTTTTATTGGTATGCTCTTGTTACAAACCTTT
GGATCGTCAGTGGTGTTATGATGGAGAGGCTTTTGGGACGCCCCCGGTCA
TTAGCCAGATTTAATGAATGCGATTTTTATCTTTTTAGATGAAAGAAATG
CATTATATTTTACAGGTATTAAATTTTGTATATCGTTTTTTTAGTATTAT
TTTTGTTTTCAAGAAAATTCCAAAAGATTGAATCGGGTAAGATATTTCAA
CGTCTAAACTTTATTTTACATCTTCGATTTTTCAGAACATCACGGATAAC
TCACTGTTAATCATAGATGAATTAGGAAGAGGTAAGAGTTATTTGCTCGT
AACTTGAGAATAGCGTATACCCGCAAAGCTAACTTACTATCTCTCTCTCT
CTCTCTCTCTATACCATCTAATAGACATTAATATTGATTGTGATACCATG
GAAGAATCTGTTGTAAAGAAATTTGTCTATAACAAAAAAGTTTATCAATG
TTTTTGAATGATTGTACGAACCATCGAGTTCACGAACAAGAAAGAATTCT
AATTGACGTCAGTTTTGAATGATTCAATTTTGACCTCTTTTTAAGAAAAC
CTCATTACTTTACAAAAAATTCATTTCAGACATTGAGATTTTCAGGAGTG
CTCTGAATTAAGTCAGAGTTTAGCCAGACAAAACTTGAAATTGATAGCAC
AACTAGAGTCTACGTTAAAATTTGAAAATCAGGCAAAAATATAGAAATGT
AGTGTTTCCGGAATGTGGGTGAAGGAAAAAAGCTCTCATGCAGCCGGCCG
GAAAAATCTTTTTTTTGCTATTTTTGATAACTTAAGATCATTGAAATTAG
AACTTTAAAGATAACATTTATGTAAAACAGTATGTAGTAAGCCTTCTGCT
ACTAACTACTAACAAAGTCTGCGGCCGGGTCAGAAAATTATTTTTTTTCA
CCCGGCTGGTTTCTGGAAACACTACATTTTTTTATTTTCGCCTTATGGAA
AAATTTTTTGGACCACCCGTTATATGATGATTTCACGCAAAAAGTCAGGA
TTTCAAAAACTGATTAGAATTATGATGGGTGTATCGTTTATCTTTGCGGT
TAAAAAATTGTTGCAGTAATTTATTGATCGGTCGAGGATCGTTCGAGTGT
TTTTAATTACACCGTGGGTGCCTTACAAAGGTTTTCAACTTATTTCTAGG
TACTGGAATAGCTGAAGGCGTAGGAATTTCTTACAGTATTTGTGAAAAAC
TCATTTCAACAAAGGTTTGTTTCTTACCTATATCTATGCGTACGTTTGCG
TATTGTCCGATTGATTTTATCCACCTTGAAAATCCTCCCATTCACGCAAA
ATTTTAATGATCAAACTATAACTTTTTTCTGATAGCGGACTTCTAGCTTG
AAGACTGAGTGAGACTCTAAAGTCATTCGTAAAGCTTGTGTTCTGCTCTA
CCGACTTAGCATTGTTTTCAATGACATGGATTCCTTGTTCGGGAATAGCC
CTGGTTTTCGAACAAATCACTCAATTGAAGACTCTTCTTACTTAAGTCAA
CTAAAACAAGACGAGTTCGGTTGAGTGAAGTGAGTTTAGACTAATACCAT
CGTGCTACAGTTGTCTTTTGTACTAGGGATCTCTTTCGCAAATTAACGTC
ACTTTCAGAACTCGTTTATAAGTAGGAAAAGCTATTTTTACTTACAGTTC
TGAAATCAATTATAATCCACCTTCTTTCAGGCATTTACATTCTTCGCCAC
TCACTTCCTGGAATTGTGCGATCTCTCAAATGTTTATCACAATGTTGAAA
AGTAA Coding sequence (CDS) from alignment at sc0000336_pilon:231816..234070- >XLOC_045489 ID=XLOC_045489|Name=XLOC_045489|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=768bp|location=Sequence derived from alignment at sc0000336_pilon:231816..234070- (Clytia hemisphaerica_ch_hm2_pilon)
CAGAGTGGTAAATCGACTTACCTAAGACAGATTGCACTTCTCCAAATCAT
GGCACAGTGTGGTTCGTTTGTGCCCGCGGCTTACGCTTCTTTCCGCCTGT
GTAAACAAGTCTTTGTTCGAATTGGTAGTGATGATGACATTGAAACCAAT
TGCTCCACTTTTAAACTCGAGCAGAGTGGTAAATCGACTTACCTAAGACA
GATTGCACTTCTCCAAATCATGGCACAGTGTGGTTCGTTTGTGCCCGCGG
CTTACGCTTCTTTCCGCCTGTGTAAACAAGTCTTTGTTCGAATTGGTAGT
GATGATGACATTGAAACCAATTGCTCCACTTTTAAACTCGAGATGAAAGA
AATGCATTATATTTTACAGATGAAAGAAATGCATTATATTTTACAGAACA
TCACGGATAACTCACTGTTAATCATAGATGAATTAGGAAGAGAACATCAC
GGATAACTCACTGTTAATCATAGATGAATTAGGAAGAGGTACTGGAATAG
CTGAAGGCGTAGGAATTTCTTACAGTATTTGTGAAAAACTCATTTCAACA
AAGGTACTGGAATAGCTGAAGGCGTAGGAATTTCTTACAGTATTTGTGAA
AAACTCATTTCAACAAAGGCATTTACATTCTTCGCCACTCACTTCCTGGA
ATTGTGCGATCTCTCAAATGTTTATCACAATGTTGAAAAGTAAGCATTTA
CATTCTTCGCCACTCACTTCCTGGAATTGTGCGATCTCTCAAATGTTTAT
CACAATGTTGAAAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000336_pilon | genome | sc0000336_pilon:231816..234070 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 310-384:76 |
| Aaloc | 247-309:605 |
| Aaloc | 199-243:1521 |
| Aaloc | 172-198:1668 |
| Aaloc | 1-171:2256 |
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